RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 DCTPP1Q9H773 170 aa11.64□□□□□ -0.55
CNEP1R1-206ENST00000565556 TBC1D2BQ9UPU7 963 aa11.64□□□□□ -0.55
CNEP1R1-206ENST00000565556 COL15A1P39059 1388 aa11.64□□□□□ -0.55
CNEP1R1-206ENST00000565556 PLSCR1O15162 318 aa11.63□□□□□ -0.55
CNEP1R1-206ENST00000565556 RPS6KA4O75676 772 aa11.63□□□□□ -0.55
CNEP1R1-206ENST00000565556 C4BP0C0L5 1744 aa11.63□□□□□ -0.55
CNEP1R1-206ENST00000565556 H7C1W4 665 aa11.63□□□□□ -0.55
CNEP1R1-206ENST00000565556 KCNQ4P56696 695 aa11.63□□□□□ -0.55
CNEP1R1-206ENST00000565556 MTX1Q13505 466 aa11.63□□□□□ -0.55
CNEP1R1-206ENST00000565556 ZNF652Q9Y2D9 606 aa11.63□□□□□ -0.55
CNEP1R1-206ENST00000565556 RTCBQ9Y3I0 505 aaKnown RBP11.63□□□□□ -0.55
CNEP1R1-206ENST00000565556 HLFQ16534 295 aa11.62□□□□□ -0.55
CNEP1R1-206ENST00000565556 CLEC4GQ6UXB4 293 aa11.62□□□□□ -0.55
CNEP1R1-206ENST00000565556 UBE3BQ7Z3V4 1068 aa11.62□□□□□ -0.55
CNEP1R1-206ENST00000565556 SSH3Q8TE77 659 aa11.62□□□□□ -0.55
CNEP1R1-206ENST00000565556 PDZRN3Q9UPQ7 1066 aa11.62□□□□□ -0.55
CNEP1R1-206ENST00000565556 GNPATO15228 680 aa11.61□□□□□ -0.55
CNEP1R1-206ENST00000565556 CAMTA2O94983 1202 aa11.61□□□□□ -0.55
CNEP1R1-206ENST00000565556 APBA3O96018 575 aa11.61□□□□□ -0.55
CNEP1R1-206ENST00000565556 NUCB1Q02818 461 aa11.61□□□□□ -0.55
CNEP1R1-206ENST00000565556 PPP1R42Q7Z4L9 355 aa11.61□□□□□ -0.55
CNEP1R1-206ENST00000565556 FAM43AQ8N2R8 423 aa11.61□□□□□ -0.55
CNEP1R1-206ENST00000565556 SUCLG2Q96I99 432 aa11.61□□□□□ -0.55
CNEP1R1-206ENST00000565556 AK7Q96M32 723 aa11.61□□□□□ -0.55
CNEP1R1-206ENST00000565556 BCORQ6W2J9 1755 aa11.61□□□□□ -0.55
CNEP1R1-206ENST00000565556 RGPD3A6NKT7 1758 aaPredicted RBP11.61□□□□□ -0.55
CNEP1R1-206ENST00000565556 RGPD4Q7Z3J3 1758 aa11.61□□□□□ -0.55
CNEP1R1-206ENST00000565556 PNMA6EA0A0J9YXQ4 647 aa11.6□□□□□ -0.55
CNEP1R1-206ENST00000565556 SRGAP3O43295 1099 aa11.6□□□□□ -0.55
CNEP1R1-206ENST00000565556 PCCAP05165 728 aaPredicted RBP11.6□□□□□ -0.55
CNEP1R1-206ENST00000565556 CASP7P55210 303 aa11.6□□□□□ -0.55
CNEP1R1-206ENST00000565556 POLA2Q14181 598 aa11.6□□□□□ -0.55
CNEP1R1-206ENST00000565556 ZNF34Q8IZ26 560 aa11.6□□□□□ -0.55
CNEP1R1-206ENST00000565556 LRRC4BQ9NT99 713 aa11.6□□□□□ -0.55
CNEP1R1-206ENST00000565556 TNS1Q9HBL0 1735 aaKnown RBP11.6□□□□□ -0.55
CNEP1R1-206ENST00000565556 TXNRD1Q16881 649 aa11.6□□□□□ -0.55
CNEP1R1-206ENST00000565556 PARP10Q53GL7 1025 aa11.6□□□□□ -0.55
CNEP1R1-206ENST00000565556 HSP90AB4PQ58FF6 505 aa11.6□□□□□ -0.55
CNEP1R1-206ENST00000565556 ANKRD45Q5TZF3 282 aa11.6□□□□□ -0.55
CNEP1R1-206ENST00000565556 NLRP10Q86W26 655 aa11.6□□□□□ -0.55
CNEP1R1-206ENST00000565556 CHD1LQ86WJ1 897 aa11.6□□□□□ -0.55
CNEP1R1-206ENST00000565556 ZBTB38Q8NAP3 1195 aaPredicted RBP11.6□□□□□ -0.55
CNEP1R1-206ENST00000565556 TBC1D32Q96NH3 1257 aa11.6□□□□□ -0.55
CNEP1R1-206ENST00000565556 BICC1Q9H694 974 aaKnown RBP11.6□□□□□ -0.55
CNEP1R1-206ENST00000565556 ZPR1O75312 459 aa11.59□□□□□ -0.55
CNEP1R1-206ENST00000565556 PRKCSHP14314 528 aaPredicted RBP11.59□□□□□ -0.55
CNEP1R1-206ENST00000565556 TRAPPC3LQ5T215 181 aa11.59□□□□□ -0.55
CNEP1R1-206ENST00000565556 L1TD1Q5T7N2 865 aaKnown RBP11.59□□□□□ -0.55
CNEP1R1-206ENST00000565556 KAZALD1Q96I82 304 aa11.59□□□□□ -0.55
CNEP1R1-206ENST00000565556 NARFQ9UHQ1 456 aa11.59□□□□□ -0.55
CNEP1R1-206ENST00000565556 SCN7AQ01118 1682 aa11.58□□□□□ -0.55
CNEP1R1-206ENST00000565556 RAB11FIP3O75154 756 aa11.58□□□□□ -0.56
CNEP1R1-206ENST00000565556 SEC24BO95487 1268 aa11.58□□□□□ -0.56
CNEP1R1-206ENST00000565556 GPTP24298 496 aa11.58□□□□□ -0.56
CNEP1R1-206ENST00000565556 RABL6Q3YEC7 729 aaPredicted RBP11.58□□□□□ -0.56
CNEP1R1-206ENST00000565556 CDHR2Q9BYE9 1310 aa11.58□□□□□ -0.56
CNEP1R1-206ENST00000565556 UBR3Q6ZT12 1888 aa11.58□□□□□ -0.56
CNEP1R1-206ENST00000565556 HSP90B1P14625 803 aaKnown RBP11.57□□□□□ -0.56
CNEP1R1-206ENST00000565556 PROM2Q8N271 834 aa11.57□□□□□ -0.56
CNEP1R1-206ENST00000565556 PLA2G12BQ9BX93 195 aa11.57□□□□□ -0.56
CNEP1R1-206ENST00000565556 SSFA2P28290 1259 aa11.57□□□□□ -0.56
CNEP1R1-206ENST00000565556 RFC4P35249 363 aa11.57□□□□□ -0.56
CNEP1R1-206ENST00000565556 ILDR1Q86SU0 546 aaPredicted RBP11.57□□□□□ -0.56
CNEP1R1-206ENST00000565556 JARID2Q92833 1246 aaPredicted RBP11.57□□□□□ -0.56
CNEP1R1-206ENST00000565556 ARHGEF1Q92888 912 aaKnown RBP11.57□□□□□ -0.56
CNEP1R1-206ENST00000565556 UTP14AQ9BVJ6 771 aaKnown RBP11.57□□□□□ -0.56
CNEP1R1-206ENST00000565556 ANTXR1Q9H6X2 564 aa11.57□□□□□ -0.56
CNEP1R1-206ENST00000565556 TRMT112Q9UI30 125 aaKnown RBP11.57□□□□□ -0.56
CNEP1R1-206ENST00000565556 SURF6O75683 361 aaKnown RBP11.56□□□□□ -0.56
CNEP1R1-206ENST00000565556 FOXO4P98177 505 aa11.56□□□□□ -0.56
CNEP1R1-206ENST00000565556 EPHA10Q5JZY3 1008 aa11.56□□□□□ -0.56
CNEP1R1-206ENST00000565556 FAM89AQ96GI7 184 aa11.56□□□□□ -0.56
CNEP1R1-206ENST00000565556 LRRCC1Q9C099 1032 aa11.56□□□□□ -0.56
CNEP1R1-206ENST00000565556 LNPKQ9C0E8 428 aa11.56□□□□□ -0.56
CNEP1R1-206ENST00000565556 SLKQ9H2G2 1235 aaPredicted RBP11.56□□□□□ -0.56
CNEP1R1-206ENST00000565556 NIP7Q9Y221 180 aaKnown RBP eCLIP11.56□□□□□ -0.56
CNEP1R1-206ENST00000565556 EXOC6BQ9Y2D4 811 aa11.56□□□□□ -0.56
CNEP1R1-206ENST00000565556 UBN2Q6ZU65 1347 aa11.56□□□□□ -0.56
CNEP1R1-206ENST00000565556 C4AP0C0L4 1744 aa11.55□□□□□ -0.56
CNEP1R1-206ENST00000565556 MYH3P11055 1940 aa11.55□□□□□ -0.56
CNEP1R1-206ENST00000565556 SF3B2Q13435 895 aaKnown RBP11.55□□□□□ -0.56
CNEP1R1-206ENST00000565556 USPL1Q5W0Q7 1092 aa11.55□□□□□ -0.56
CNEP1R1-206ENST00000565556 LMBR1LQ6UX01 489 aa11.55□□□□□ -0.56
CNEP1R1-206ENST00000565556 ERC1Q8IUD2 1116 aa11.55□□□□□ -0.56
CNEP1R1-206ENST00000565556 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.55□□□□□ -0.56
CNEP1R1-206ENST00000565556 SH3TC1Q8TE82 1336 aa11.55□□□□□ -0.56
CNEP1R1-206ENST00000565556 USP42Q9H9J4 1324 aaKnown RBP11.55□□□□□ -0.56
CNEP1R1-206ENST00000565556 EP400Q96L91 3159 aa11.55□□□□□ -0.56
CNEP1R1-206ENST00000565556 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.55□□□□□ -0.56
CNEP1R1-206ENST00000565556 SUSD4Q5VX71 490 aa11.55□□□□□ -0.56
CNEP1R1-206ENST00000565556 APBB1O00213 710 aa11.54□□□□□ -0.56
CNEP1R1-206ENST00000565556 IRS4O14654 1257 aaPredicted RBP11.54□□□□□ -0.56
CNEP1R1-206ENST00000565556 PDE8AO60658 829 aa11.54□□□□□ -0.56
CNEP1R1-206ENST00000565556 PHF14O94880 888 aa11.54□□□□□ -0.56
CNEP1R1-206ENST00000565556 G3BP1Q13283 466 aaKnown RBP eCLIP11.54□□□□□ -0.56
CNEP1R1-206ENST00000565556 OS9Q13438 667 aaPredicted RBP11.54□□□□□ -0.56
CNEP1R1-206ENST00000565556 FLAD1Q8NFF5 587 aa11.54□□□□□ -0.56
CNEP1R1-206ENST00000565556 KIF1BPQ96EK5 621 aa11.54□□□□□ -0.56
CNEP1R1-206ENST00000565556 SETDB2Q96T68 719 aa11.54□□□□□ -0.56
CNEP1R1-206ENST00000565556 TBC1D2Q9BYX2 928 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms