RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 HSP90AB3PQ58FF7 597 aa25.9■■□□□ 1.74
CLN6-206ENST00000565471 XAGE3Q8WTP9 111 aa25.9■■□□□ 1.74
CLN6-206ENST00000565471 RPGRQ92834 1020 aaKnown RBP25.9■■□□□ 1.74
CLN6-206ENST00000565471 CEP350Q5VT06 3117 aa25.9■■□□□ 1.74
CLN6-206ENST00000565471 RNF123Q5XPI4 1314 aa25.89■■□□□ 1.74
CLN6-206ENST00000565471 SMC1BQ8NDV3 1235 aa25.89■■□□□ 1.74
CLN6-206ENST00000565471 ZNF853P0CG23 659 aa25.88■■□□□ 1.73
CLN6-206ENST00000565471 HDGFL1Q5TGJ6 251 aa25.88■■□□□ 1.73
CLN6-206ENST00000565471 UTP14AQ9BVJ6 771 aaKnown RBP25.88■■□□□ 1.73
CLN6-206ENST00000565471 SNED1Q8TER0 1413 aa25.88■■□□□ 1.73
CLN6-206ENST00000565471 POTECB2RU33 542 aa25.87■■□□□ 1.73
CLN6-206ENST00000565471 CALD1Q05682 793 aaKnown RBP25.87■■□□□ 1.73
CLN6-206ENST00000565471 AIMP1Q12904 312 aaKnown RBP25.87■■□□□ 1.73
CLN6-206ENST00000565471 SLC10A5Q5PT55 438 aa25.87■■□□□ 1.73
CLN6-206ENST00000565471 CC2D2BQ6DHV5 1058 aa25.87■■□□□ 1.73
CLN6-206ENST00000565471 OLFM4Q6UX06 510 aa25.87■■□□□ 1.73
CLN6-206ENST00000565471 MBIPQ9NS73 344 aa25.87■■□□□ 1.73
CLN6-206ENST00000565471 CHPF2Q9P2E5 772 aa25.87■■□□□ 1.73
CLN6-206ENST00000565471 CRAMP1Q96RY5 1269 aa25.86■■□□□ 1.73
CLN6-206ENST00000565471 IFT57Q9NWB7 429 aa25.86■■□□□ 1.73
CLN6-206ENST00000565471 DBF4Q9UBU7 674 aaPredicted RBP25.86■■□□□ 1.73
CLN6-206ENST00000565471 TCIRG1Q13488 830 aa25.85■■□□□ 1.73
CLN6-206ENST00000565471 DUSP27Q5VZP5 1158 aa25.85■■□□□ 1.73
CLN6-206ENST00000565471 RBM17Q96I25 401 aaKnown RBP25.85■■□□□ 1.73
CLN6-206ENST00000565471 NLRP3Q96P20 1036 aa25.85■■□□□ 1.73
CLN6-206ENST00000565471 GNAI1P63096 354 aa25.84■■□□□ 1.73
CLN6-206ENST00000565471 GRIPAP1Q4V328 841 aa25.84■■□□□ 1.73
CLN6-206ENST00000565471 NLRP10Q86W26 655 aa25.84■■□□□ 1.73
CLN6-206ENST00000565471 PSMD1Q99460 953 aa25.84■■□□□ 1.73
CLN6-206ENST00000565471 ZNF277Q9NRM2 450 aaPredicted RBP25.84■■□□□ 1.73
CLN6-206ENST00000565471 C3orf67Q6ZVT6 689 aa25.83■■□□□ 1.73
CLN6-206ENST00000565471 DDNO94850 711 aaPredicted RBP25.82■■□□□ 1.72
CLN6-206ENST00000565471 IARSP41252 1262 aaKnown RBP25.82■■□□□ 1.72
CLN6-206ENST00000565471 SYNE4Q8N205 404 aa25.82■■□□□ 1.72
CLN6-206ENST00000565471 PLBD2Q8NHP8 589 aa25.82■■□□□ 1.72
CLN6-206ENST00000565471 DNAJC5GQ8N7S2 189 aa25.81■■□□□ 1.72
CLN6-206ENST00000565471 HYPKQ9NX55 129 aa25.81■■□□□ 1.72
CLN6-206ENST00000565471 PPEF1O14829 653 aaPredicted RBP25.8■■□□□ 1.72
CLN6-206ENST00000565471 ANKRD13DQ6ZTN6 518 aa25.8■■□□□ 1.72
CLN6-206ENST00000565471 L3MBTL3Q96JM7 780 aaPredicted RBP25.8■■□□□ 1.72
CLN6-206ENST00000565471 CCDC184Q52MB2 194 aa25.79■■□□□ 1.72
CLN6-206ENST00000565471 SH3TC1Q8TE82 1336 aa25.79■■□□□ 1.72
CLN6-206ENST00000565471 LAMB2P55268 1798 aa25.78■■□□□ 1.72
CLN6-206ENST00000565471 TRMT112Q9UI30 125 aaKnown RBP25.78■■□□□ 1.72
CLN6-206ENST00000565471 SCN4AP35499 1836 aa25.77■■□□□ 1.72
CLN6-206ENST00000565471 IQCA1LA6NCM1 817 aa25.77■■□□□ 1.72
CLN6-206ENST00000565471 FZD9O00144 591 aa25.77■■□□□ 1.72
CLN6-206ENST00000565471 ZNF541Q9H0D2 1346 aa25.77■■□□□ 1.72
CLN6-206ENST00000565471 ZNF316A6NFI3 1004 aaPredicted RBP25.76■■□□□ 1.71
CLN6-206ENST00000565471 ISCA1Q9BUE6 129 aa25.76■■□□□ 1.71
CLN6-206ENST00000565471 ABCC4O15439 1325 aa25.75■■□□□ 1.71
CLN6-206ENST00000565471 HCLS1P14317 486 aaPredicted RBP25.75■■□□□ 1.71
CLN6-206ENST00000565471 JDP2Q8WYK2 163 aa25.75■■□□□ 1.71
CLN6-206ENST00000565471 ATP6V0A2Q9Y487 856 aa25.75■■□□□ 1.71
CLN6-206ENST00000565471 CCDC27Q2M243 656 aa25.74■■□□□ 1.71
CLN6-206ENST00000565471 TMX4Q9H1E5 349 aaPredicted RBP25.74■■□□□ 1.71
CLN6-206ENST00000565471 CHMP4AQ9BY43 222 aa25.73■■□□□ 1.71
CLN6-206ENST00000565471 BBOX1O75936 387 aa25.72■■□□□ 1.71
CLN6-206ENST00000565471 HTRA3P83110 453 aa25.72■■□□□ 1.71
CLN6-206ENST00000565471 TRIM28Q13263 835 aaKnown RBP25.72■■□□□ 1.71
CLN6-206ENST00000565471 CHADLQ6NUI6 762 aa25.72■■□□□ 1.71
CLN6-206ENST00000565471 C8orf58Q8NAV2 365 aa25.72■■□□□ 1.71
CLN6-206ENST00000565471 KLRG1Q96E93 195 aa25.72■■□□□ 1.71
CLN6-206ENST00000565471 COL4A5P29400 1685 aa25.71■■□□□ 1.71
CLN6-206ENST00000565471 ELL2O00472 640 aaPredicted RBP25.71■■□□□ 1.71
CLN6-206ENST00000565471 TCERG1O14776 1098 aaKnown RBP25.71■■□□□ 1.71
CLN6-206ENST00000565471 GPC2Q8N158 579 aa25.71■■□□□ 1.71
CLN6-206ENST00000565471 TAF1DQ9H5J8 278 aaPredicted RBP25.71■■□□□ 1.71
CLN6-206ENST00000565471 DDX60Q8IY21 1712 aaKnown RBP25.71■■□□□ 1.71
CLN6-206ENST00000565471 ATP5J2-PTCD1G3V325 749 aa25.7■■□□□ 1.7
CLN6-206ENST00000565471 ANP32CO43423 234 aa25.7■■□□□ 1.7
CLN6-206ENST00000565471 GOLGA2Q08379 1002 aa25.7■■□□□ 1.7
CLN6-206ENST00000565471 NCBP3Q53F19 620 aaKnown RBP25.7■■□□□ 1.7
CLN6-206ENST00000565471 DDX46Q7L014 1031 aaKnown RBP25.7■■□□□ 1.7
CLN6-206ENST00000565471 SLC51AQ86UW1 340 aa25.7■■□□□ 1.7
CLN6-206ENST00000565471 VPS33BQ9H267 617 aa25.7■■□□□ 1.7
CLN6-206ENST00000565471 EIF6P56537 245 aaKnown RBP25.69■■□□□ 1.7
CLN6-206ENST00000565471 GRAPQ13588 217 aa25.69■■□□□ 1.7
CLN6-206ENST00000565471 RIC3Q7Z5B4 369 aa25.69■■□□□ 1.7
CLN6-206ENST00000565471 LDHDQ86WU2 507 aa25.69■■□□□ 1.7
CLN6-206ENST00000565471 SP8Q8IXZ3 490 aa25.69■■□□□ 1.7
CLN6-206ENST00000565471 LARGE2Q8N3Y3 721 aa25.69■■□□□ 1.7
CLN6-206ENST00000565471 GRAPLQ8TC17 118 aaPredicted RBP25.69■■□□□ 1.7
CLN6-206ENST00000565471 PHAXQ9H814 394 aaKnown RBP25.69■■□□□ 1.7
CLN6-206ENST00000565471 MRS2Q9HD23 443 aa25.69■■□□□ 1.7
CLN6-206ENST00000565471 HACL1Q9UJ83 578 aa25.69■■□□□ 1.7
CLN6-206ENST00000565471 POTEIP0CG38 1075 aa25.68■■□□□ 1.7
CLN6-206ENST00000565471 POTEJP0CG39 1038 aa25.68■■□□□ 1.7
CLN6-206ENST00000565471 CCDC30Q5VVM6 783 aa25.68■■□□□ 1.7
CLN6-206ENST00000565471 WWC1Q8IX03 1113 aa25.68■■□□□ 1.7
CLN6-206ENST00000565471 SUPT20HQ8NEM7 779 aa25.68■■□□□ 1.7
CLN6-206ENST00000565471 RTFDC1Q9BY42 306 aaPredicted RBP25.68■■□□□ 1.7
CLN6-206ENST00000565471 SF3B3Q15393 1217 aaKnown RBP25.67■■□□□ 1.7
CLN6-206ENST00000565471 TMC4Q7Z404 712 aa25.67■■□□□ 1.7
CLN6-206ENST00000565471 FAM89AQ96GI7 184 aa25.67■■□□□ 1.7
CLN6-206ENST00000565471 PPIP5K2O43314 1243 aa25.65■■□□□ 1.7
CLN6-206ENST00000565471 EPHX2P34913 555 aa25.65■■□□□ 1.7
CLN6-206ENST00000565471 NIM1KQ8IY84 436 aa25.65■■□□□ 1.7
CLN6-206ENST00000565471 TSPYL6Q8N831 410 aa25.65■■□□□ 1.7
CLN6-206ENST00000565471 JMYQ8N9B5 988 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms