RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 EAPPQ56P03 285 aaPredicted RBP8.33□□□□□ -1.08
TCF4-228ENST00000565393 SLC10A5Q5PT55 438 aa8.33□□□□□ -1.08
TCF4-228ENST00000565393 DUSP27Q5VZP5 1158 aa8.33□□□□□ -1.08
TCF4-228ENST00000565393 LRP10Q7Z4F1 713 aa8.33□□□□□ -1.08
TCF4-228ENST00000565393 NLRP10Q86W26 655 aa8.33□□□□□ -1.08
TCF4-228ENST00000565393 CFAP44Q96MT7 982 aa8.33□□□□□ -1.08
TCF4-228ENST00000565393 CHPF2Q9P2E5 772 aa8.33□□□□□ -1.08
TCF4-228ENST00000565393 DBF4Q9UBU7 674 aaPredicted RBP8.33□□□□□ -1.08
TCF4-228ENST00000565393 GJA3Q9Y6H8 435 aa8.33□□□□□ -1.08
TCF4-228ENST00000565393 BBOX1O75936 387 aa8.32□□□□□ -1.08
TCF4-228ENST00000565393 CHADLQ6NUI6 762 aa8.32□□□□□ -1.08
TCF4-228ENST00000565393 C3orf67Q6ZVT6 689 aa8.32□□□□□ -1.08
TCF4-228ENST00000565393 DDX46Q7L014 1031 aaKnown RBP8.32□□□□□ -1.08
TCF4-228ENST00000565393 LARGE2Q8N3Y3 721 aa8.32□□□□□ -1.08
TCF4-228ENST00000565393 PLBD2Q8NHP8 589 aa8.32□□□□□ -1.08
TCF4-228ENST00000565393 KLRG1Q96E93 195 aa8.32□□□□□ -1.08
TCF4-228ENST00000565393 MBIPQ9NS73 344 aa8.32□□□□□ -1.08
TCF4-228ENST00000565393 HYPKQ9NX55 129 aa8.32□□□□□ -1.08
TCF4-228ENST00000565393 ATP5J2-PTCD1G3V325 749 aa8.31□□□□□ -1.08
TCF4-228ENST00000565393 POTEIP0CG38 1075 aa8.31□□□□□ -1.08
TCF4-228ENST00000565393 POTEJP0CG39 1038 aa8.31□□□□□ -1.08
TCF4-228ENST00000565393 GNAI1P63096 354 aa8.31□□□□□ -1.08
TCF4-228ENST00000565393 RTL5Q5HYW3 569 aaPredicted RBP8.31□□□□□ -1.08
TCF4-228ENST00000565393 RIC3Q7Z5B4 369 aa8.31□□□□□ -1.08
TCF4-228ENST00000565393 PSMD1Q99460 953 aa8.31□□□□□ -1.08
TCF4-228ENST00000565393 TAF1DQ9H5J8 278 aaPredicted RBP8.31□□□□□ -1.08
TCF4-228ENST00000565393 HACL1Q9UJ83 578 aa8.31□□□□□ -1.08
TCF4-228ENST00000565393 ATP6V0A2Q9Y487 856 aa8.31□□□□□ -1.08
TCF4-228ENST00000565393 ABCC12Q96J65 1359 aa8.31□□□□□ -1.08
TCF4-228ENST00000565393 NRXN2Q9P2S2 1712 aa8.31□□□□□ -1.08
TCF4-228ENST00000565393 SH3TC1Q8TE82 1336 aa8.3□□□□□ -1.08
TCF4-228ENST00000565393 SIPA1L3O60292 1781 aaPredicted RBP8.3□□□□□ -1.08
TCF4-228ENST00000565393 FZD9O00144 591 aa8.3□□□□□ -1.08
TCF4-228ENST00000565393 HOXB7P09629 217 aa8.3□□□□□ -1.08
TCF4-228ENST00000565393 LMOD1P29536 600 aaPredicted RBP8.3□□□□□ -1.08
TCF4-228ENST00000565393 EPHX2P34913 555 aa8.3□□□□□ -1.08
TCF4-228ENST00000565393 PNMA8AQ86V59 439 aaPredicted RBP8.3□□□□□ -1.08
TCF4-228ENST00000565393 SP8Q8IXZ3 490 aa8.3□□□□□ -1.08
TCF4-228ENST00000565393 NIM1KQ8IY84 436 aa8.3□□□□□ -1.08
TCF4-228ENST00000565393 GPC2Q8N158 579 aa8.3□□□□□ -1.08
TCF4-228ENST00000565393 MPNDQ8N594 471 aa8.3□□□□□ -1.08
TCF4-228ENST00000565393 SUPT20HQ8NEM7 779 aa8.3□□□□□ -1.08
TCF4-228ENST00000565393 FAM89AQ96GI7 184 aa8.3□□□□□ -1.08
TCF4-228ENST00000565393 CHMP4AQ9BY43 222 aa8.3□□□□□ -1.08
TCF4-228ENST00000565393 IFT57Q9NWB7 429 aa8.3□□□□□ -1.08
TCF4-228ENST00000565393 ZNF541Q9H0D2 1346 aa8.29□□□□□ -1.08
TCF4-228ENST00000565393 AFDNP55196 1824 aaKnown RBP8.29□□□□□ -1.08
TCF4-228ENST00000565393 PPIP5K2O43314 1243 aa8.29□□□□□ -1.08
TCF4-228ENST00000565393 ANP32CO43423 234 aa8.29□□□□□ -1.08
TCF4-228ENST00000565393 ZNF853P0CG23 659 aa8.29□□□□□ -1.08
TCF4-228ENST00000565393 GOLGA2Q08379 1002 aa8.29□□□□□ -1.08
TCF4-228ENST00000565393 AOC3Q16853 763 aa8.29□□□□□ -1.08
TCF4-228ENST00000565393 CCDC184Q52MB2 194 aa8.29□□□□□ -1.08
TCF4-228ENST00000565393 IFFO2Q5TF58 517 aa8.29□□□□□ -1.08
TCF4-228ENST00000565393 DPP8Q6V1X1 898 aaPredicted RBP8.29□□□□□ -1.08
TCF4-228ENST00000565393 LDHDQ86WU2 507 aa8.29□□□□□ -1.08
TCF4-228ENST00000565393 C8orf58Q8NAV2 365 aa8.29□□□□□ -1.08
TCF4-228ENST00000565393 L3MBTL3Q96JM7 780 aaPredicted RBP8.29□□□□□ -1.08
TCF4-228ENST00000565393 PHAXQ9H814 394 aaKnown RBP8.29□□□□□ -1.08
TCF4-228ENST00000565393 SALL2Q9Y467 1007 aaPredicted RBP8.29□□□□□ -1.08
TCF4-228ENST00000565393 RNF123Q5XPI4 1314 aa8.29□□□□□ -1.08
TCF4-228ENST00000565393 IBTKQ9P2D0 1353 aaPredicted RBP8.28□□□□□ -1.08
TCF4-228ENST00000565393 ZNF316A6NFI3 1004 aaPredicted RBP8.28□□□□□ -1.08
TCF4-228ENST00000565393 GRAPQ13588 217 aa8.28□□□□□ -1.08
TCF4-228ENST00000565393 CCDC30Q5VVM6 783 aa8.28□□□□□ -1.08
TCF4-228ENST00000565393 SLC51AQ86UW1 340 aa8.28□□□□□ -1.08
TCF4-228ENST00000565393 CNTROBQ8N137 903 aa8.28□□□□□ -1.08
TCF4-228ENST00000565393 JMYQ8N9B5 988 aa8.28□□□□□ -1.08
TCF4-228ENST00000565393 GRAPLQ8TC17 118 aaPredicted RBP8.28□□□□□ -1.08
TCF4-228ENST00000565393 ISCA1Q9BUE6 129 aa8.28□□□□□ -1.08
TCF4-228ENST00000565393 VPS33BQ9H267 617 aa8.28□□□□□ -1.08
TCF4-228ENST00000565393 MKRN1Q9UHC7 482 aaKnown RBP8.28□□□□□ -1.08
TCF4-228ENST00000565393 NSFL1CQ9UNZ2 370 aaKnown RBP8.28□□□□□ -1.08
TCF4-228ENST00000565393 ARFGEF1Q9Y6D6 1849 aa8.28□□□□□ -1.08
TCF4-228ENST00000565393 ABCC4O15439 1325 aa8.28□□□□□ -1.08
TCF4-228ENST00000565393 UTRNP46939 3433 aa8.28□□□□□ -1.08
TCF4-228ENST00000565393 SCN7AQ01118 1682 aa8.27□□□□□ -1.08
TCF4-228ENST00000565393 G3V3G9 751 aa8.27□□□□□ -1.09
TCF4-228ENST00000565393 IRS4O14654 1257 aaPredicted RBP8.27□□□□□ -1.09
TCF4-228ENST00000565393 DDX58O95786 925 aaKnown RBP8.27□□□□□ -1.09
TCF4-228ENST00000565393 EPS15P42566 896 aa8.27□□□□□ -1.09
TCF4-228ENST00000565393 TRIM28Q13263 835 aaKnown RBP8.27□□□□□ -1.09
TCF4-228ENST00000565393 DCAF8Q5TAQ9 597 aa8.27□□□□□ -1.09
TCF4-228ENST00000565393 MAP1SQ66K74 1059 aaPredicted RBP8.27□□□□□ -1.09
TCF4-228ENST00000565393 JARID2Q92833 1246 aaPredicted RBP8.27□□□□□ -1.09
TCF4-228ENST00000565393 MYD88Q99836 296 aa8.27□□□□□ -1.09
TCF4-228ENST00000565393 MRS2Q9HD23 443 aa8.27□□□□□ -1.09
TCF4-228ENST00000565393 CREBZFQ9NS37 354 aa8.27□□□□□ -1.09
TCF4-228ENST00000565393 ZNRF3Q9ULT6 936 aa8.27□□□□□ -1.09
TCF4-228ENST00000565393 BRCA1P38398 1863 aaKnown RBP8.27□□□□□ -1.09
TCF4-228ENST00000565393 TMEM88BA6NKF7 163 aa8.26□□□□□ -1.09
TCF4-228ENST00000565393 C6orf229H3BNL8 230 aa8.26□□□□□ -1.09
TCF4-228ENST00000565393 RIMBP2O15034 1052 aa8.26□□□□□ -1.09
TCF4-228ENST00000565393 RAD17O75943 681 aa8.26□□□□□ -1.09
TCF4-228ENST00000565393 ITGBL1O95965 494 aaPredicted RBP8.26□□□□□ -1.09
TCF4-228ENST00000565393 HSP90B1P14625 803 aaKnown RBP8.26□□□□□ -1.09
TCF4-228ENST00000565393 RPS8P62241 208 aaKnown RBP8.26□□□□□ -1.09
TCF4-228ENST00000565393 TNIP1Q15025 636 aa8.26□□□□□ -1.09
TCF4-228ENST00000565393 SF3B3Q15393 1217 aaKnown RBP8.26□□□□□ -1.09
TCF4-228ENST00000565393 WASHC4Q2M389 1173 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms