RNA–Protein interactions for RNA: ENST00000565235.2

CDH16-203, Transcript of cadherin 16, humanhuman

TSL 3

Gene CDH16, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-203ENST00000565235 CAPN15O75808 1086 aa17.26■□□□□ 0.35
CDH16-203ENST00000565235 NTSR2O95665 410 aa17.26■□□□□ 0.35
CDH16-203ENST00000565235 NPR1P16066 1061 aa17.26■□□□□ 0.35
CDH16-203ENST00000565235 HTRA3P83110 453 aa17.26■□□□□ 0.35
CDH16-203ENST00000565235 SOGA3Q5TF21 947 aa17.26■□□□□ 0.35
CDH16-203ENST00000565235 ELL2O00472 640 aaPredicted RBP17.25■□□□□ 0.35
CDH16-203ENST00000565235 GPTP24298 496 aa17.25■□□□□ 0.35
CDH16-203ENST00000565235 TSPYL6Q8N831 410 aa17.25■□□□□ 0.35
CDH16-203ENST00000565235 UTP14AQ9BVJ6 771 aaKnown RBP17.25■□□□□ 0.35
CDH16-203ENST00000565235 SALL2Q9Y467 1007 aaPredicted RBP17.25■□□□□ 0.35
CDH16-203ENST00000565235 NUP98P52948 1817 aa17.25■□□□□ 0.35
CDH16-203ENST00000565235 ANKRD31Q8N7Z5 1873 aa17.24■□□□□ 0.35
CDH16-203ENST00000565235 VEGFAP15692 232 aaPredicted RBP17.24■□□□□ 0.35
CDH16-203ENST00000565235 LMNB1P20700 586 aa17.24■□□□□ 0.35
CDH16-203ENST00000565235 TRIM28Q13263 835 aaKnown RBP17.24■□□□□ 0.35
CDH16-203ENST00000565235 CRY2Q49AN0 593 aa17.24■□□□□ 0.35
CDH16-203ENST00000565235 SUSD4Q5VX71 490 aa17.24■□□□□ 0.35
CDH16-203ENST00000565235 TNS4Q8IZW8 715 aa17.24■□□□□ 0.35
CDH16-203ENST00000565235 ANKRD36CQ5JPF3 1778 aa17.23■□□□□ 0.35
CDH16-203ENST00000565235 E9PSI1 815 aa17.23■□□□□ 0.35
CDH16-203ENST00000565235 HSP90B1P14625 803 aaKnown RBP17.23■□□□□ 0.35
CDH16-203ENST00000565235 DPY19L2Q6NUT2 758 aa17.23■□□□□ 0.35
CDH16-203ENST00000565235 NLRP10Q86W26 655 aa17.23■□□□□ 0.35
CDH16-203ENST00000565235 ZC3H4Q9UPT8 1303 aaKnown RBP17.22■□□□□ 0.35
CDH16-203ENST00000565235 COL11A2P13942 1736 aaPredicted RBP17.22■□□□□ 0.35
CDH16-203ENST00000565235 ALDH1B1P30837 517 aa17.22■□□□□ 0.35
CDH16-203ENST00000565235 RASSF7Q02833 373 aa17.22■□□□□ 0.35
CDH16-203ENST00000565235 SLC10A5Q5PT55 438 aa17.22■□□□□ 0.35
CDH16-203ENST00000565235 RIC3Q7Z5B4 369 aa17.22■□□□□ 0.35
CDH16-203ENST00000565235 ZNF622Q969S3 477 aaKnown RBP eCLIP17.22■□□□□ 0.35
CDH16-203ENST00000565235 ISCA1Q9BUE6 129 aa17.22■□□□□ 0.35
CDH16-203ENST00000565235 ABCC12Q96J65 1359 aa17.22■□□□□ 0.35
CDH16-203ENST00000565235 FAM177BA6PVY3 158 aa17.21■□□□□ 0.35
CDH16-203ENST00000565235 ERFEQ4G0M1 354 aa17.21■□□□□ 0.35
CDH16-203ENST00000565235 JMYQ8N9B5 988 aa17.21■□□□□ 0.35
CDH16-203ENST00000565235 SH3TC1Q8TE82 1336 aa17.21■□□□□ 0.34
CDH16-203ENST00000565235 GLTPD2A6NH11 291 aa17.2■□□□□ 0.34
CDH16-203ENST00000565235 VAMP4O75379 141 aa17.2■□□□□ 0.34
CDH16-203ENST00000565235 HOXA10P31260 410 aaPredicted RBP17.2■□□□□ 0.34
CDH16-203ENST00000565235 EXOSC9Q06265 439 aaKnown RBP17.2■□□□□ 0.34
CDH16-203ENST00000565235 COL13A1Q5TAT6 717 aaPredicted RBP17.2■□□□□ 0.34
CDH16-203ENST00000565235 PRPF40BQ6NWY9 871 aaKnown RBP17.2■□□□□ 0.34
CDH16-203ENST00000565235 NUTM1Q86Y26 1132 aa17.2■□□□□ 0.34
CDH16-203ENST00000565235 CCDC24Q8N4L8 307 aa17.2■□□□□ 0.34
CDH16-203ENST00000565235 RPGRQ92834 1020 aaKnown RBP17.2■□□□□ 0.34
CDH16-203ENST00000565235 ZNF428Q96B54 188 aa17.2■□□□□ 0.34
CDH16-203ENST00000565235 NLRP3Q96P20 1036 aa17.2■□□□□ 0.34
CDH16-203ENST00000565235 PHAXQ9H814 394 aaKnown RBP17.2■□□□□ 0.34
CDH16-203ENST00000565235 LTBP3Q9NS15 1303 aa17.2■□□□□ 0.34
CDH16-203ENST00000565235 GRIPAP1Q4V328 841 aa17.19■□□□□ 0.34
CDH16-203ENST00000565235 CCDC191Q8NCU4 936 aa17.19■□□□□ 0.34
CDH16-203ENST00000565235 TRMT112Q9UI30 125 aaKnown RBP17.19■□□□□ 0.34
CDH16-203ENST00000565235 ARFGEF2Q9Y6D5 1785 aa17.19■□□□□ 0.34
CDH16-203ENST00000565235 SLC4A2P04920 1241 aa17.18■□□□□ 0.34
CDH16-203ENST00000565235 NEXNQ0ZGT2 675 aa17.18■□□□□ 0.34
CDH16-203ENST00000565235 CC2D2BQ6DHV5 1058 aa17.18■□□□□ 0.34
CDH16-203ENST00000565235 KSR2Q6VAB6 950 aa17.18■□□□□ 0.34
CDH16-203ENST00000565235 CRAMP1Q96RY5 1269 aa17.18■□□□□ 0.34
CDH16-203ENST00000565235 METTL22Q9BUU2 404 aaPredicted RBP17.18■□□□□ 0.34
CDH16-203ENST00000565235 SPINK5Q9NQ38 1064 aaPredicted RBP17.18■□□□□ 0.34
CDH16-203ENST00000565235 CT47B1P0C2W7 299 aaPredicted RBP17.17■□□□□ 0.34
CDH16-203ENST00000565235 RBM17Q96I25 401 aaKnown RBP17.17■□□□□ 0.34
CDH16-203ENST00000565235 ZNF219Q9P2Y4 722 aaPredicted RBP17.17■□□□□ 0.34
CDH16-203ENST00000565235 TNRC6CQ9HCJ0 1690 aaKnown RBP17.16■□□□□ 0.34
CDH16-203ENST00000565235 FLIIQ13045 1269 aa17.16■□□□□ 0.34
CDH16-203ENST00000565235 CCDC93Q567U6 631 aa17.16■□□□□ 0.34
CDH16-203ENST00000565235 MIER1Q8N108 512 aa17.16■□□□□ 0.34
CDH16-203ENST00000565235 C21orf2O43822 256 aa17.15■□□□□ 0.34
CDH16-203ENST00000565235 SLFN5Q08AF3 891 aa17.15■□□□□ 0.34
CDH16-203ENST00000565235 RTKN2Q8IZC4 609 aa17.15■□□□□ 0.34
CDH16-203ENST00000565235 ZBTB38Q8NAP3 1195 aaPredicted RBP17.15■□□□□ 0.34
CDH16-203ENST00000565235 CWC25Q9NXE8 425 aaPredicted RBP17.15■□□□□ 0.34
CDH16-203ENST00000565235 MAP3K2Q9Y2U5 619 aa17.15■□□□□ 0.34
CDH16-203ENST00000565235 PI4KAP2A4QPH2 592 aa17.14■□□□□ 0.33
CDH16-203ENST00000565235 ATP5J2-PTCD1G3V325 749 aa17.14■□□□□ 0.33
CDH16-203ENST00000565235 TMC4Q7Z404 712 aa17.14■□□□□ 0.33
CDH16-203ENST00000565235 PI4KAP1Q8N8J0 262 aa17.14■□□□□ 0.33
CDH16-203ENST00000565235 C7orf43Q8WVR3 580 aa17.14■□□□□ 0.33
CDH16-203ENST00000565235 MYD88Q99836 296 aa17.14■□□□□ 0.33
CDH16-203ENST00000565235 TAOK3Q9H2K8 898 aa17.14■□□□□ 0.33
CDH16-203ENST00000565235 NFKBIEO00221 500 aa17.13■□□□□ 0.33
CDH16-203ENST00000565235 PCCAP05165 728 aaPredicted RBP17.13■□□□□ 0.33
CDH16-203ENST00000565235 HSPA1AP0DMV8 641 aaKnown RBP17.13■□□□□ 0.33
CDH16-203ENST00000565235 HSPA1BP0DMV9 641 aaKnown RBP17.13■□□□□ 0.33
CDH16-203ENST00000565235 FKBP5Q13451 457 aaPredicted RBP17.13■□□□□ 0.33
CDH16-203ENST00000565235 TMX4Q9H1E5 349 aaPredicted RBP17.13■□□□□ 0.33
CDH16-203ENST00000565235 SF3B3Q15393 1217 aaKnown RBP17.12■□□□□ 0.33
CDH16-203ENST00000565235 TRMT2AQ8IZ69 625 aaKnown RBP17.12■□□□□ 0.33
CDH16-203ENST00000565235 CDHR2Q9BYE9 1310 aa17.12■□□□□ 0.33
CDH16-203ENST00000565235 CACNA1FO60840 1977 aa17.11■□□□□ 0.33
CDH16-203ENST00000565235 IRS4O14654 1257 aaPredicted RBP17.11■□□□□ 0.33
CDH16-203ENST00000565235 BBOX1O75936 387 aa17.11■□□□□ 0.33
CDH16-203ENST00000565235 PRELPP51888 382 aa17.11■□□□□ 0.33
CDH16-203ENST00000565235 DDX46Q7L014 1031 aaKnown RBP17.11■□□□□ 0.33
CDH16-203ENST00000565235 DNAAF4Q8WXU2 420 aa17.11■□□□□ 0.33
CDH16-203ENST00000565235 FAM89AQ96GI7 184 aa17.11■□□□□ 0.33
CDH16-203ENST00000565235 PSMD1Q99460 953 aa17.11■□□□□ 0.33
CDH16-203ENST00000565235 LAMB2P55268 1798 aa17.1■□□□□ 0.33
CDH16-203ENST00000565235 PPEF1O14829 653 aaPredicted RBP17.1■□□□□ 0.33
CDH16-203ENST00000565235 HCLS1P14317 486 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms