RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 SASS6Q6UVJ0 657 aa8.68□□□□□ -1.02
SMG1-210ENST00000565224 SUCLG2Q96I99 432 aa8.68□□□□□ -1.02
SMG1-210ENST00000565224 SNRKQ9NRH2 765 aa8.68□□□□□ -1.02
SMG1-210ENST00000565224 ADCY5O95622 1261 aa8.67□□□□□ -1.02
SMG1-210ENST00000565224 DDX58O95786 925 aaKnown RBP8.67□□□□□ -1.02
SMG1-210ENST00000565224 PDIA4P13667 645 aaKnown RBP8.67□□□□□ -1.02
SMG1-210ENST00000565224 PSMA5P28066 241 aa8.67□□□□□ -1.02
SMG1-210ENST00000565224 ST3GAL1Q11201 340 aa8.67□□□□□ -1.02
SMG1-210ENST00000565224 NMIQ13287 307 aaPredicted RBP8.67□□□□□ -1.02
SMG1-210ENST00000565224 ME3Q16798 604 aa8.67□□□□□ -1.02
SMG1-210ENST00000565224 TPRNQ4KMQ1 711 aa8.67□□□□□ -1.02
SMG1-210ENST00000565224 MAP4K1Q92918 833 aa8.67□□□□□ -1.02
SMG1-210ENST00000565224 VPS37CA5D8V6 355 aaPredicted RBP8.66□□□□□ -1.02
SMG1-210ENST00000565224 SASH1O94885 1247 aa8.66□□□□□ -1.02
SMG1-210ENST00000565224 ARHGEF25Q86VW2 580 aa8.66□□□□□ -1.02
SMG1-210ENST00000565224 EAF2Q96CJ1 260 aaPredicted RBP8.66□□□□□ -1.02
SMG1-210ENST00000565224 KAZALD1Q96I82 304 aa8.66□□□□□ -1.02
SMG1-210ENST00000565224 FAM227BQ96M60 508 aa8.66□□□□□ -1.02
SMG1-210ENST00000565224 FUCA2Q9BTY2 467 aa8.66□□□□□ -1.02
SMG1-210ENST00000565224 BICC1Q9H694 974 aaKnown RBP8.66□□□□□ -1.02
SMG1-210ENST00000565224 PRAMEF22A3QJZ6 481 aa8.66□□□□□ -1.02
SMG1-210ENST00000565224 DYNC1I1O14576 645 aa8.66□□□□□ -1.02
SMG1-210ENST00000565224 SLC27A2O14975 620 aa8.66□□□□□ -1.02
SMG1-210ENST00000565224 KDM4AO75164 1064 aa8.66□□□□□ -1.02
SMG1-210ENST00000565224 GCP02774 474 aa8.66□□□□□ -1.02
SMG1-210ENST00000565224 GIMAP6Q6P9H5 292 aa8.66□□□□□ -1.02
SMG1-210ENST00000565224 NECAB1Q8N987 351 aa8.66□□□□□ -1.02
SMG1-210ENST00000565224 ANKRD24Q8TF21 1146 aa8.66□□□□□ -1.02
SMG1-210ENST00000565224 DDX21Q9NR30 783 aaKnown RBP eCLIP8.66□□□□□ -1.02
SMG1-210ENST00000565224 TPCN1Q9ULQ1 816 aa8.66□□□□□ -1.02
SMG1-210ENST00000565224 PDCP20941 246 aa8.65□□□□□ -1.02
SMG1-210ENST00000565224 RBM10P98175 930 aaKnown RBP8.65□□□□□ -1.02
SMG1-210ENST00000565224 ANKRD1Q15327 319 aa8.65□□□□□ -1.02
SMG1-210ENST00000565224 RNF20Q5VTR2 975 aa8.65□□□□□ -1.02
SMG1-210ENST00000565224 DDX54Q8TDD1 881 aaKnown RBP8.65□□□□□ -1.02
SMG1-210ENST00000565224 PIBF1Q8WXW3 757 aa8.65□□□□□ -1.02
SMG1-210ENST00000565224 MAP7D2Q96T17 732 aa8.65□□□□□ -1.02
SMG1-210ENST00000565224 FSD1Q9BTV5 496 aa8.65□□□□□ -1.02
SMG1-210ENST00000565224 CCDC8Q9H0W5 538 aaPredicted RBP8.65□□□□□ -1.02
SMG1-210ENST00000565224 RGPD2P0DJD1 1756 aa8.65□□□□□ -1.02
SMG1-210ENST00000565224 SLIT3O75094 1523 aa8.65□□□□□ -1.02
SMG1-210ENST00000565224 A0A0D9SFI3 127 aa8.65□□□□□ -1.02
SMG1-210ENST00000565224 KRT85P78386 507 aa8.65□□□□□ -1.02
SMG1-210ENST00000565224 LARP1BQ659C4 914 aaKnown RBP8.65□□□□□ -1.02
SMG1-210ENST00000565224 CERKQ8TCT0 537 aa8.65□□□□□ -1.02
SMG1-210ENST00000565224 FAM13BQ9NYF5 915 aa8.65□□□□□ -1.02
SMG1-210ENST00000565224 TLR7Q9NYK1 1049 aaKnown RBP8.65□□□□□ -1.02
SMG1-210ENST00000565224 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.65□□□□□ -1.02
SMG1-210ENST00000565224 MED23Q9ULK4 1368 aa8.65□□□□□ -1.03
SMG1-210ENST00000565224 TCHHQ07283 1943 aa8.64□□□□□ -1.03
SMG1-210ENST00000565224 AIMP1Q12904 312 aaKnown RBP8.64□□□□□ -1.03
SMG1-210ENST00000565224 PDIA6Q15084 440 aa8.64□□□□□ -1.03
SMG1-210ENST00000565224 BLOC1S2Q6QNY1 142 aa8.64□□□□□ -1.03
SMG1-210ENST00000565224 ZNF830Q96NB3 372 aaPredicted RBP8.64□□□□□ -1.03
SMG1-210ENST00000565224 ALDH8A1Q9H2A2 487 aaPredicted RBP8.64□□□□□ -1.03
SMG1-210ENST00000565224 BOLA2Q9H3K6 86 aa8.64□□□□□ -1.03
SMG1-210ENST00000565224 XIRP1Q702N8 1843 aaKnown RBP8.64□□□□□ -1.03
SMG1-210ENST00000565224 DTNBO60941 627 aa8.64□□□□□ -1.03
SMG1-210ENST00000565224 IGKV5-2P06315 115 aa8.64□□□□□ -1.03
SMG1-210ENST00000565224 CCDC192P0DO97 292 aa8.64□□□□□ -1.03
SMG1-210ENST00000565224 RPS6KB1P23443 525 aa8.64□□□□□ -1.03
SMG1-210ENST00000565224 LARP1Q6PKG0 1096 aaKnown RBP8.64□□□□□ -1.03
SMG1-210ENST00000565224 CDC37L1Q7L3B6 337 aa8.64□□□□□ -1.03
SMG1-210ENST00000565224 RIC3Q7Z5B4 369 aa8.64□□□□□ -1.03
SMG1-210ENST00000565224 MPNDQ8N594 471 aa8.64□□□□□ -1.03
SMG1-210ENST00000565224 PKNOX2Q96KN3 472 aa8.64□□□□□ -1.03
SMG1-210ENST00000565224 SIL1Q9H173 461 aa8.64□□□□□ -1.03
SMG1-210ENST00000565224 HMG20BQ9P0W2 317 aa8.64□□□□□ -1.03
SMG1-210ENST00000565224 CHD2O14647 1828 aaKnown RBP8.64□□□□□ -1.03
SMG1-210ENST00000565224 ELP1O95163 1332 aa8.64□□□□□ -1.03
SMG1-210ENST00000565224 JCADQ9P266 1359 aa8.64□□□□□ -1.03
SMG1-210ENST00000565224 MRC1P22897 1456 aa8.64□□□□□ -1.03
SMG1-210ENST00000565224 NEXNQ0ZGT2 675 aa8.63□□□□□ -1.03
SMG1-210ENST00000565224 NOLC1Q14978 699 aaKnown RBP eCLIP8.63□□□□□ -1.03
SMG1-210ENST00000565224 DNTTIP2Q5QJE6 756 aaKnown RBP8.63□□□□□ -1.03
SMG1-210ENST00000565224 TTC6Q86TZ1 520 aa8.63□□□□□ -1.03
SMG1-210ENST00000565224 TTC12Q9H892 705 aaPredicted RBP8.63□□□□□ -1.03
SMG1-210ENST00000565224 CAMTA1Q9Y6Y1 1673 aa8.63□□□□□ -1.03
SMG1-210ENST00000565224 NEURL1BA8MQ27 555 aa8.63□□□□□ -1.03
SMG1-210ENST00000565224 TSGA10IPQ3SY00 556 aa8.63□□□□□ -1.03
SMG1-210ENST00000565224 MTERF4Q7Z6M4 381 aaKnown RBP8.63□□□□□ -1.03
SMG1-210ENST00000565224 VSIG10Q8N0Z9 540 aa8.63□□□□□ -1.03
SMG1-210ENST00000565224 TMEM94Q12767 1356 aa8.62□□□□□ -1.03
SMG1-210ENST00000565224 TPM3P06753 285 aa8.62□□□□□ -1.03
SMG1-210ENST00000565224 PLCB2Q00722 1185 aa8.62□□□□□ -1.03
SMG1-210ENST00000565224 COL9A3Q14050 684 aaPredicted RBP8.62□□□□□ -1.03
SMG1-210ENST00000565224 TOB2Q14106 344 aaPredicted RBP8.62□□□□□ -1.03
SMG1-210ENST00000565224 GCKRQ14397 625 aa8.62□□□□□ -1.03
SMG1-210ENST00000565224 MAP3K11Q16584 847 aa8.62□□□□□ -1.03
SMG1-210ENST00000565224 ZNF790Q6PG37 636 aa8.62□□□□□ -1.03
SMG1-210ENST00000565224 ZNF589Q86UQ0 364 aaPredicted RBP8.62□□□□□ -1.03
SMG1-210ENST00000565224 FERMT3Q86UX7 667 aa8.62□□□□□ -1.03
SMG1-210ENST00000565224 PRIMPOLQ96LW4 560 aa8.62□□□□□ -1.03
SMG1-210ENST00000565224 NUP62CLQ9H1M0 184 aa8.62□□□□□ -1.03
SMG1-210ENST00000565224 SPTLC3Q9NUV7 552 aa8.62□□□□□ -1.03
SMG1-210ENST00000565224 SIPA1L3O60292 1781 aaPredicted RBP8.62□□□□□ -1.03
SMG1-210ENST00000565224 ADAMTS7Q9UKP4 1686 aa8.62□□□□□ -1.03
SMG1-210ENST00000565224 HMGN5P82970 282 aaKnown RBP8.62□□□□□ -1.03
SMG1-210ENST00000565224 KRT32Q14532 448 aa8.62□□□□□ -1.03
SMG1-210ENST00000565224 LMOD2Q6P5Q4 547 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms