RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TCERG1O14776 1098 aaKnown RBP17.64■□□□□ 0.41
VPS9D1-204ENST00000565023 HSP90AB3PQ58FF7 597 aa17.64■□□□□ 0.41
VPS9D1-204ENST00000565023 UTP14AQ9BVJ6 771 aaKnown RBP17.64■□□□□ 0.41
VPS9D1-204ENST00000565023 TAOK3Q9H2K8 898 aa17.64■□□□□ 0.41
VPS9D1-204ENST00000565023 DICER1Q9UPY3 1922 aaKnown RBP17.64■□□□□ 0.41
VPS9D1-204ENST00000565023 KLRG2A4D1S0 409 aaPredicted RBP17.63■□□□□ 0.41
VPS9D1-204ENST00000565023 CCDC93Q567U6 631 aa17.63■□□□□ 0.41
VPS9D1-204ENST00000565023 DIEXFQ68CQ4 756 aaKnown RBP17.63■□□□□ 0.41
VPS9D1-204ENST00000565023 C3orf67Q6ZVT6 689 aa17.63■□□□□ 0.41
VPS9D1-204ENST00000565023 WWC1Q8IX03 1113 aa17.63■□□□□ 0.41
VPS9D1-204ENST00000565023 RRAGCQ9HB90 399 aa17.63■□□□□ 0.41
VPS9D1-204ENST00000565023 KDM2BQ8NHM5 1336 aa17.63■□□□□ 0.41
VPS9D1-204ENST00000565023 IBTKQ9P2D0 1353 aaPredicted RBP17.63■□□□□ 0.41
VPS9D1-204ENST00000565023 ATP5J2-PTCD1G3V325 749 aa17.62■□□□□ 0.41
VPS9D1-204ENST00000565023 ALDH1B1P30837 517 aa17.62■□□□□ 0.41
VPS9D1-204ENST00000565023 TCIRG1Q13488 830 aa17.62■□□□□ 0.41
VPS9D1-204ENST00000565023 ANKRD13DQ6ZTN6 518 aa17.62■□□□□ 0.41
VPS9D1-204ENST00000565023 NLRP10Q86W26 655 aa17.62■□□□□ 0.41
VPS9D1-204ENST00000565023 SYNE4Q8N205 404 aa17.62■□□□□ 0.41
VPS9D1-204ENST00000565023 PHAXQ9H814 394 aaKnown RBP17.62■□□□□ 0.41
VPS9D1-204ENST00000565023 HYPKQ9NX55 129 aa17.62■□□□□ 0.41
VPS9D1-204ENST00000565023 TRMT112Q9UI30 125 aaKnown RBP17.62■□□□□ 0.41
VPS9D1-204ENST00000565023 LAMB2P55268 1798 aa17.61■□□□□ 0.41
VPS9D1-204ENST00000565023 HCLS1P14317 486 aaPredicted RBP17.61■□□□□ 0.41
VPS9D1-204ENST00000565023 SOGA3Q5TF21 947 aa17.61■□□□□ 0.41
VPS9D1-204ENST00000565023 C16orf71Q8IYS4 520 aaPredicted RBP17.61■□□□□ 0.41
VPS9D1-204ENST00000565023 DNAJC5GQ8N7S2 189 aa17.61■□□□□ 0.41
VPS9D1-204ENST00000565023 TSPYL6Q8N831 410 aa17.61■□□□□ 0.41
VPS9D1-204ENST00000565023 PLBD2Q8NHP8 589 aa17.61■□□□□ 0.41
VPS9D1-204ENST00000565023 CRY2Q49AN0 593 aa17.6■□□□□ 0.41
VPS9D1-204ENST00000565023 RTL5Q5HYW3 569 aaPredicted RBP17.6■□□□□ 0.41
VPS9D1-204ENST00000565023 RIC3Q7Z5B4 369 aa17.6■□□□□ 0.41
VPS9D1-204ENST00000565023 SLC51AQ86UW1 340 aa17.6■□□□□ 0.41
VPS9D1-204ENST00000565023 C7orf43Q8WVR3 580 aa17.6■□□□□ 0.41
VPS9D1-204ENST00000565023 NLRP3Q96P20 1036 aa17.6■□□□□ 0.41
VPS9D1-204ENST00000565023 CCER2I3L3R5 266 aa17.59■□□□□ 0.41
VPS9D1-204ENST00000565023 GOLGA2Q08379 1002 aa17.59■□□□□ 0.41
VPS9D1-204ENST00000565023 CCDC27Q2M243 656 aa17.59■□□□□ 0.41
VPS9D1-204ENST00000565023 RBM17Q96I25 401 aaKnown RBP17.59■□□□□ 0.41
VPS9D1-204ENST00000565023 ZNF277Q9NRM2 450 aaPredicted RBP17.59■□□□□ 0.41
VPS9D1-204ENST00000565023 TAF1P21675 1872 aa17.58■□□□□ 0.41
VPS9D1-204ENST00000565023 RIC1Q4ADV7 1423 aa17.58■□□□□ 0.41
VPS9D1-204ENST00000565023 LTBP3Q9NS15 1303 aa17.58■□□□□ 0.4
VPS9D1-204ENST00000565023 SH3TC1Q8TE82 1336 aa17.57■□□□□ 0.4
VPS9D1-204ENST00000565023 GLTPD2A6NH11 291 aa17.57■□□□□ 0.4
VPS9D1-204ENST00000565023 PPEF1O14829 653 aaPredicted RBP17.57■□□□□ 0.4
VPS9D1-204ENST00000565023 FKBP4Q02790 459 aaKnown RBP eCLIP17.57■□□□□ 0.4
VPS9D1-204ENST00000565023 CCDC30Q5VVM6 783 aa17.57■□□□□ 0.4
VPS9D1-204ENST00000565023 MYD88Q99836 296 aa17.57■□□□□ 0.4
VPS9D1-204ENST00000565023 ZC3H4Q9UPT8 1303 aaKnown RBP17.56■□□□□ 0.4
VPS9D1-204ENST00000565023 TOMM70O94826 608 aa17.56■□□□□ 0.4
VPS9D1-204ENST00000565023 TWISTNBQ3B726 338 aaPredicted RBP17.56■□□□□ 0.4
VPS9D1-204ENST00000565023 DPY19L2Q6NUT2 758 aa17.56■□□□□ 0.4
VPS9D1-204ENST00000565023 FAM89AQ96GI7 184 aa17.56■□□□□ 0.4
VPS9D1-204ENST00000565023 ISCA1Q9BUE6 129 aa17.56■□□□□ 0.4
VPS9D1-204ENST00000565023 DDX60Q8IY21 1712 aaKnown RBP17.55■□□□□ 0.4
VPS9D1-204ENST00000565023 HOXA10P31260 410 aaPredicted RBP17.55■□□□□ 0.4
VPS9D1-204ENST00000565023 SLC10A5Q5PT55 438 aa17.55■□□□□ 0.4
VPS9D1-204ENST00000565023 RTKN2Q8IZC4 609 aa17.55■□□□□ 0.4
VPS9D1-204ENST00000565023 CRAMP1Q96RY5 1269 aa17.55■□□□□ 0.4
VPS9D1-204ENST00000565023 ABCC4O15439 1325 aa17.54■□□□□ 0.4
VPS9D1-204ENST00000565023 RNF123Q5XPI4 1314 aa17.54■□□□□ 0.4
VPS9D1-204ENST00000565023 FANCIQ9NVI1 1328 aa17.54■□□□□ 0.4
VPS9D1-204ENST00000565023 APLP1P51693 650 aa17.54■□□□□ 0.4
VPS9D1-204ENST00000565023 NCBP3Q53F19 620 aaKnown RBP17.54■□□□□ 0.4
VPS9D1-204ENST00000565023 STK31Q9BXU1 1019 aa17.54■□□□□ 0.4
VPS9D1-204ENST00000565023 IL16Q14005 1332 aa17.53■□□□□ 0.4
VPS9D1-204ENST00000565023 WDR90Q96KV7 1748 aa17.53■□□□□ 0.4
VPS9D1-204ENST00000565023 DDNO94850 711 aaPredicted RBP17.53■□□□□ 0.4
VPS9D1-204ENST00000565023 IARSP41252 1262 aaKnown RBP17.53■□□□□ 0.4
VPS9D1-204ENST00000565023 COL13A1Q5TAT6 717 aaPredicted RBP17.53■□□□□ 0.4
VPS9D1-204ENST00000565023 MIER1Q8N108 512 aa17.53■□□□□ 0.4
VPS9D1-204ENST00000565023 JARID2Q92833 1246 aaPredicted RBP17.53■□□□□ 0.4
VPS9D1-204ENST00000565023 TMX4Q9H1E5 349 aaPredicted RBP17.53■□□□□ 0.4
VPS9D1-204ENST00000565023 DDX58O95786 925 aaKnown RBP17.52■□□□□ 0.4
VPS9D1-204ENST00000565023 DDX46Q7L014 1031 aaKnown RBP17.52■□□□□ 0.4
VPS9D1-204ENST00000565023 MAP3K2Q9Y2U5 619 aa17.52■□□□□ 0.4
VPS9D1-204ENST00000565023 VEGFAP15692 232 aaPredicted RBP17.51■□□□□ 0.39
VPS9D1-204ENST00000565023 EXOSC9Q06265 439 aaKnown RBP17.51■□□□□ 0.39
VPS9D1-204ENST00000565023 CC2D2BQ6DHV5 1058 aa17.51■□□□□ 0.39
VPS9D1-204ENST00000565023 G2E3Q7L622 706 aa17.51■□□□□ 0.39
VPS9D1-204ENST00000565023 WDR63Q8IWG1 891 aa17.51■□□□□ 0.39
VPS9D1-204ENST00000565023 CHMP4AQ9BY43 222 aa17.51■□□□□ 0.39
VPS9D1-204ENST00000565023 SPINK5Q9NQ38 1064 aaPredicted RBP17.51■□□□□ 0.39
VPS9D1-204ENST00000565023 ZNF541Q9H0D2 1346 aa17.5■□□□□ 0.39
VPS9D1-204ENST00000565023 IRS4O14654 1257 aaPredicted RBP17.5■□□□□ 0.39
VPS9D1-204ENST00000565023 SLC4A2P04920 1241 aa17.5■□□□□ 0.39
VPS9D1-204ENST00000565023 RBM46Q8TBY0 533 aaKnown RBP17.5■□□□□ 0.39
VPS9D1-204ENST00000565023 METTL22Q9BUU2 404 aaPredicted RBP17.5■□□□□ 0.39
VPS9D1-204ENST00000565023 PI4KAP2A4QPH2 592 aa17.49■□□□□ 0.39
VPS9D1-204ENST00000565023 LARGE2Q8N3Y3 721 aa17.49■□□□□ 0.39
VPS9D1-204ENST00000565023 PI4KAP1Q8N8J0 262 aa17.49■□□□□ 0.39
VPS9D1-204ENST00000565023 PSMD1Q99460 953 aa17.49■□□□□ 0.39
VPS9D1-204ENST00000565023 ATP6V0A2Q9Y487 856 aa17.49■□□□□ 0.39
VPS9D1-204ENST00000565023 SNED1Q8TER0 1413 aa17.48■□□□□ 0.39
VPS9D1-204ENST00000565023 POTECB2RU33 542 aa17.48■□□□□ 0.39
VPS9D1-204ENST00000565023 GRAPQ13588 217 aa17.48■□□□□ 0.39
VPS9D1-204ENST00000565023 KSR2Q6VAB6 950 aa17.48■□□□□ 0.39
VPS9D1-204ENST00000565023 GRAPLQ8TC17 118 aaPredicted RBP17.48■□□□□ 0.39
VPS9D1-204ENST00000565023 JDP2Q8WYK2 163 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms