RNA–Protein interactions for RNA: ENST00000564953.1

PPCDC-207, Transcript of phosphopantothenoylcysteine decarboxylase, humanhuman

TSL 2

Gene PPCDC, Length 489 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPCDC-207ENST00000564953 TAOK3Q9H2K8 898 aa11.99□□□□□ -0.49
PPCDC-207ENST00000564953 IFT57Q9NWB7 429 aa11.99□□□□□ -0.49
PPCDC-207ENST00000564953 TNRC6CQ9HCJ0 1690 aaKnown RBP11.99□□□□□ -0.49
PPCDC-207ENST00000564953 NUP98P52948 1817 aa11.99□□□□□ -0.49
PPCDC-207ENST00000564953 UBN2Q6ZU65 1347 aa11.98□□□□□ -0.49
PPCDC-207ENST00000564953 GTF2E1P29083 439 aaPredicted RBP11.98□□□□□ -0.49
PPCDC-207ENST00000564953 GNAI1P63096 354 aa11.98□□□□□ -0.49
PPCDC-207ENST00000564953 CCDC93Q567U6 631 aa11.98□□□□□ -0.49
PPCDC-207ENST00000564953 SLC10A5Q5PT55 438 aa11.98□□□□□ -0.49
PPCDC-207ENST00000564953 PPP1R42Q7Z4L9 355 aa11.98□□□□□ -0.49
PPCDC-207ENST00000564953 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.98□□□□□ -0.49
PPCDC-207ENST00000564953 ZNF526Q8TF50 670 aaPredicted RBP11.98□□□□□ -0.49
PPCDC-207ENST00000564953 DBF4Q9UBU7 674 aaPredicted RBP11.98□□□□□ -0.49
PPCDC-207ENST00000564953 FANCIQ9NVI1 1328 aa11.97□□□□□ -0.49
PPCDC-207ENST00000564953 C21orf2O43822 256 aa11.97□□□□□ -0.49
PPCDC-207ENST00000564953 NTSR2O95665 410 aa11.97□□□□□ -0.49
PPCDC-207ENST00000564953 MYL6BP14649 208 aa11.97□□□□□ -0.49
PPCDC-207ENST00000564953 PRELPP51888 382 aa11.97□□□□□ -0.49
PPCDC-207ENST00000564953 NEUROD2Q15784 382 aa11.97□□□□□ -0.49
PPCDC-207ENST00000564953 DPY19L2Q6NUT2 758 aa11.97□□□□□ -0.49
PPCDC-207ENST00000564953 SNED1Q8TER0 1413 aa11.96□□□□□ -0.49
PPCDC-207ENST00000564953 DICER1Q9UPY3 1922 aaKnown RBP11.96□□□□□ -0.49
PPCDC-207ENST00000564953 SLX4Q8IY92 1834 aa11.96□□□□□ -0.49
PPCDC-207ENST00000564953 VEGFAP15692 232 aaPredicted RBP11.96□□□□□ -0.49
PPCDC-207ENST00000564953 RASSF7Q02833 373 aa11.96□□□□□ -0.49
PPCDC-207ENST00000564953 TRIM28Q13263 835 aaKnown RBP11.96□□□□□ -0.49
PPCDC-207ENST00000564953 CRAMP1Q96RY5 1269 aa11.96□□□□□ -0.49
PPCDC-207ENST00000564953 PSMD1Q99460 953 aa11.96□□□□□ -0.49
PPCDC-207ENST00000564953 ZBTB3Q9H5J0 574 aa11.96□□□□□ -0.49
PPCDC-207ENST00000564953 NMRK2Q9NPI5 230 aa11.96□□□□□ -0.49
PPCDC-207ENST00000564953 HYPKQ9NX55 129 aa11.96□□□□□ -0.49
PPCDC-207ENST00000564953 ABCC12Q96J65 1359 aa11.95□□□□□ -0.5
PPCDC-207ENST00000564953 EIF2S2P20042 333 aaKnown RBP11.95□□□□□ -0.5
PPCDC-207ENST00000564953 APLP1P51693 650 aa11.95□□□□□ -0.5
PPCDC-207ENST00000564953 FKBP4Q02790 459 aaKnown RBP eCLIP11.95□□□□□ -0.5
PPCDC-207ENST00000564953 TCIRG1Q13488 830 aa11.95□□□□□ -0.5
PPCDC-207ENST00000564953 HDGFL1Q5TGJ6 251 aa11.95□□□□□ -0.5
PPCDC-207ENST00000564953 SUSD4Q5VX71 490 aa11.95□□□□□ -0.5
PPCDC-207ENST00000564953 COPS6Q7L5N1 327 aa11.95□□□□□ -0.5
PPCDC-207ENST00000564953 CCDC24Q8N4L8 307 aa11.95□□□□□ -0.5
PPCDC-207ENST00000564953 PLBD2Q8NHP8 589 aa11.95□□□□□ -0.5
PPCDC-207ENST00000564953 UTP14AQ9BVJ6 771 aaKnown RBP11.95□□□□□ -0.5
PPCDC-207ENST00000564953 VPS33BQ9H267 617 aa11.95□□□□□ -0.5
PPCDC-207ENST00000564953 PROSER3Q2NL68 480 aa11.94□□□□□ -0.5
PPCDC-207ENST00000564953 ERFEQ4G0M1 354 aa11.94□□□□□ -0.5
PPCDC-207ENST00000564953 C16orf71Q8IYS4 520 aaPredicted RBP11.94□□□□□ -0.5
PPCDC-207ENST00000564953 L3MBTL3Q96JM7 780 aaPredicted RBP11.94□□□□□ -0.5
PPCDC-207ENST00000564953 MBIPQ9NS73 344 aa11.94□□□□□ -0.5
PPCDC-207ENST00000564953 WDR90Q96KV7 1748 aa11.94□□□□□ -0.5
PPCDC-207ENST00000564953 RARSP54136 660 aaKnown RBP11.93□□□□□ -0.5
PPCDC-207ENST00000564953 ANKRD13DQ6ZTN6 518 aa11.93□□□□□ -0.5
PPCDC-207ENST00000564953 NLRP10Q86W26 655 aa11.93□□□□□ -0.5
PPCDC-207ENST00000564953 XAGE3Q8WTP9 111 aa11.93□□□□□ -0.5
PPCDC-207ENST00000564953 RPGRQ92834 1020 aaKnown RBP11.93□□□□□ -0.5
PPCDC-207ENST00000564953 RBM17Q96I25 401 aaKnown RBP11.93□□□□□ -0.5
PPCDC-207ENST00000564953 NLRP3Q96P20 1036 aa11.93□□□□□ -0.5
PPCDC-207ENST00000564953 CHPF2Q9P2E5 772 aa11.93□□□□□ -0.5
PPCDC-207ENST00000564953 TIAM2Q8IVF5 1701 aa11.93□□□□□ -0.5
PPCDC-207ENST00000564953 SH3TC1Q8TE82 1336 aa11.92□□□□□ -0.5
PPCDC-207ENST00000564953 HSP90B1P14625 803 aaKnown RBP11.92□□□□□ -0.5
PPCDC-207ENST00000564953 GPTP24298 496 aa11.92□□□□□ -0.5
PPCDC-207ENST00000564953 PDE3AQ14432 1141 aa11.92□□□□□ -0.5
PPCDC-207ENST00000564953 TMC4Q7Z404 712 aa11.92□□□□□ -0.5
PPCDC-207ENST00000564953 NUTM1Q86Y26 1132 aa11.92□□□□□ -0.5
PPCDC-207ENST00000564953 SMC1BQ8NDV3 1235 aa11.92□□□□□ -0.5
PPCDC-207ENST00000564953 EXOC6Q8TAG9 804 aa11.92□□□□□ -0.5
PPCDC-207ENST00000564953 ZNF428Q96B54 188 aa11.92□□□□□ -0.5
PPCDC-207ENST00000564953 ANKRD36CQ5JPF3 1778 aa11.92□□□□□ -0.5
PPCDC-207ENST00000564953 PCNTO95613 3336 aa11.91□□□□□ -0.5
PPCDC-207ENST00000564953 IQCA1LA6NCM1 817 aa11.91□□□□□ -0.5
PPCDC-207ENST00000564953 BBOX1O75936 387 aa11.91□□□□□ -0.5
PPCDC-207ENST00000564953 KRT24Q2M2I5 525 aa11.91□□□□□ -0.5
PPCDC-207ENST00000564953 ISCA1Q9BUE6 129 aa11.91□□□□□ -0.5
PPCDC-207ENST00000564953 RRAGCQ9HB90 399 aa11.91□□□□□ -0.5
PPCDC-207ENST00000564953 LAS1LQ9Y4W2 734 aaKnown RBP11.91□□□□□ -0.5
PPCDC-207ENST00000564953 FAM177BA6PVY3 158 aa11.9□□□□□ -0.5
PPCDC-207ENST00000564953 FZD9O00144 591 aa11.9□□□□□ -0.5
PPCDC-207ENST00000564953 PLIN1O60240 522 aa11.9□□□□□ -0.5
PPCDC-207ENST00000564953 BCAR3O75815 825 aa11.9□□□□□ -0.5
PPCDC-207ENST00000564953 CCDC88AQ3V6T2 1871 aa11.9□□□□□ -0.5
PPCDC-207ENST00000564953 B4GALNT3Q6L9W6 998 aa11.9□□□□□ -0.5
PPCDC-207ENST00000564953 CRBNQ96SW2 442 aa11.9□□□□□ -0.5
PPCDC-207ENST00000564953 RTFDC1Q9BY42 306 aaPredicted RBP11.9□□□□□ -0.5
PPCDC-207ENST00000564953 POTECB2RU33 542 aa11.89□□□□□ -0.51
PPCDC-207ENST00000564953 ANXA1P04083 346 aa11.89□□□□□ -0.51
PPCDC-207ENST00000564953 IARSP41252 1262 aaKnown RBP11.89□□□□□ -0.51
PPCDC-207ENST00000564953 BRPF1P55201 1214 aaPredicted RBP11.89□□□□□ -0.51
PPCDC-207ENST00000564953 CCDC30Q5VVM6 783 aa11.89□□□□□ -0.51
PPCDC-207ENST00000564953 TSR2Q969E8 191 aaKnown RBP11.89□□□□□ -0.51
PPCDC-207ENST00000564953 CCDC136Q96JN2 1154 aa11.89□□□□□ -0.51
PPCDC-207ENST00000564953 TMX4Q9H1E5 349 aaPredicted RBP11.89□□□□□ -0.51
PPCDC-207ENST00000564953 TRMT112Q9UI30 125 aaKnown RBP11.89□□□□□ -0.51
PPCDC-207ENST00000564953 ATP6V0A2Q9Y487 856 aa11.89□□□□□ -0.51
PPCDC-207ENST00000564953 SCN4AP35499 1836 aa11.88□□□□□ -0.51
PPCDC-207ENST00000564953 PPEF1O14829 653 aaPredicted RBP11.88□□□□□ -0.51
PPCDC-207ENST00000564953 EXOSC9Q06265 439 aaKnown RBP11.88□□□□□ -0.51
PPCDC-207ENST00000564953 AIMP1Q12904 312 aaKnown RBP11.88□□□□□ -0.51
PPCDC-207ENST00000564953 AAMPQ13685 434 aa11.88□□□□□ -0.51
PPCDC-207ENST00000564953 SF3B3Q15393 1217 aaKnown RBP11.88□□□□□ -0.51
PPCDC-207ENST00000564953 ALDH1L2Q3SY69 923 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms