RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 PI4KAP1Q8N8J0 262 aa14.02□□□□□ -0.17
SF3B3-205ENST00000564899 RPS6KA4O75676 772 aa14.01□□□□□ -0.17
SF3B3-205ENST00000564899 HMGB2P26583 209 aaKnown RBP14.01□□□□□ -0.17
SF3B3-205ENST00000564899 CCT4P50991 539 aaKnown RBP14.01□□□□□ -0.17
SF3B3-205ENST00000564899 FSTL1Q12841 308 aa14.01□□□□□ -0.17
SF3B3-205ENST00000564899 INTS3Q68E01 1043 aaKnown RBP14.01□□□□□ -0.17
SF3B3-205ENST00000564899 KSR2Q6VAB6 950 aa14.01□□□□□ -0.17
SF3B3-205ENST00000564899 C16orf71Q8IYS4 520 aaPredicted RBP14.01□□□□□ -0.17
SF3B3-205ENST00000564899 DNAAF4Q8WXU2 420 aa14.01□□□□□ -0.17
SF3B3-205ENST00000564899 DDX19BQ9UMR2 479 aa14.01□□□□□ -0.17
SF3B3-205ENST00000564899 ZNF330Q9Y3S2 320 aaPredicted RBP14.01□□□□□ -0.17
SF3B3-205ENST00000564899 PARP3Q9Y6F1 533 aa14.01□□□□□ -0.17
SF3B3-205ENST00000564899 CACNA1FO60840 1977 aa14.01□□□□□ -0.17
SF3B3-205ENST00000564899 RFC4P35249 363 aa14□□□□□ -0.17
SF3B3-205ENST00000564899 IL6STP40189 918 aaPredicted RBP14□□□□□ -0.17
SF3B3-205ENST00000564899 INTS5Q6P9B9 1019 aaKnown RBP14□□□□□ -0.17
SF3B3-205ENST00000564899 RIC3Q7Z5B4 369 aa14□□□□□ -0.17
SF3B3-205ENST00000564899 NPM2Q86SE8 214 aaKnown RBP14□□□□□ -0.17
SF3B3-205ENST00000564899 PIM2Q9P1W9 311 aa14□□□□□ -0.17
SF3B3-205ENST00000564899 MAP3K2Q9Y2U5 619 aa14□□□□□ -0.17
SF3B3-205ENST00000564899 DALRD3Q5D0E6 543 aaKnown RBP13.99□□□□□ -0.17
SF3B3-205ENST00000564899 RC3H1Q5TC82 1133 aaKnown RBP13.99□□□□□ -0.17
SF3B3-205ENST00000564899 TTLL7Q6ZT98 887 aa13.99□□□□□ -0.17
SF3B3-205ENST00000564899 ANKRD13DQ6ZTN6 518 aa13.99□□□□□ -0.17
SF3B3-205ENST00000564899 PPP4R2Q9NY27 417 aa13.99□□□□□ -0.17
SF3B3-205ENST00000564899 USP42Q9H9J4 1324 aaKnown RBP13.98□□□□□ -0.17
SF3B3-205ENST00000564899 HSPA1AP0DMV8 641 aaKnown RBP13.98□□□□□ -0.17
SF3B3-205ENST00000564899 HSPA1BP0DMV9 641 aaKnown RBP13.98□□□□□ -0.17
SF3B3-205ENST00000564899 ADRA2BP18089 450 aa13.98□□□□□ -0.17
SF3B3-205ENST00000564899 KIF6Q6ZMV9 814 aa13.98□□□□□ -0.17
SF3B3-205ENST00000564899 PLBD2Q8NHP8 589 aa13.98□□□□□ -0.17
SF3B3-205ENST00000564899 CHMP4BQ9H444 224 aaKnown RBP13.98□□□□□ -0.17
SF3B3-205ENST00000564899 KDM2BQ8NHM5 1336 aa13.97□□□□□ -0.17
SF3B3-205ENST00000564899 POLRMTO00411 1230 aaKnown RBP13.97□□□□□ -0.17
SF3B3-205ENST00000564899 EIF5P55010 431 aaKnown RBP13.97□□□□□ -0.17
SF3B3-205ENST00000564899 AAMPQ13685 434 aa13.97□□□□□ -0.17
SF3B3-205ENST00000564899 BEND3Q5T5X7 828 aa13.97□□□□□ -0.17
SF3B3-205ENST00000564899 SRCIN1Q9C0H9 1055 aa13.97□□□□□ -0.17
SF3B3-205ENST00000564899 AFDNP55196 1824 aaKnown RBP13.97□□□□□ -0.17
SF3B3-205ENST00000564899 TIAM2Q8IVF5 1701 aa13.96□□□□□ -0.17
SF3B3-205ENST00000564899 NEXNQ0ZGT2 675 aa13.96□□□□□ -0.17
SF3B3-205ENST00000564899 MYD88Q99836 296 aa13.96□□□□□ -0.17
SF3B3-205ENST00000564899 METTL22Q9BUU2 404 aaPredicted RBP13.96□□□□□ -0.17
SF3B3-205ENST00000564899 ZBTB3Q9H5J0 574 aa13.96□□□□□ -0.17
SF3B3-205ENST00000564899 MAP3K15Q6ZN16 1313 aa13.95□□□□□ -0.18
SF3B3-205ENST00000564899 POTECB2RU33 542 aa13.95□□□□□ -0.18
SF3B3-205ENST00000564899 ZBTB7BO15156 539 aaPredicted RBP13.95□□□□□ -0.18
SF3B3-205ENST00000564899 ALDH1L1O75891 902 aa13.95□□□□□ -0.18
SF3B3-205ENST00000564899 DZIP3Q86Y13 1208 aaKnown RBP13.95□□□□□ -0.18
SF3B3-205ENST00000564899 SMC1BQ8NDV3 1235 aa13.95□□□□□ -0.18
SF3B3-205ENST00000564899 LINS1Q8NG48 757 aa13.95□□□□□ -0.18
SF3B3-205ENST00000564899 COL15A1P39059 1388 aa13.95□□□□□ -0.18
SF3B3-205ENST00000564899 CARMIL3Q8ND23 1372 aa13.95□□□□□ -0.18
SF3B3-205ENST00000564899 A0A087WZG4 1122 aa13.94□□□□□ -0.18
SF3B3-205ENST00000564899 TM4SF1P30408 202 aa13.94□□□□□ -0.18
SF3B3-205ENST00000564899 CCDC88AQ3V6T2 1871 aa13.94□□□□□ -0.18
SF3B3-205ENST00000564899 ZBTB40Q9NUA8 1239 aa13.94□□□□□ -0.18
SF3B3-205ENST00000564899 CWF19L2Q2TBE0 894 aaKnown RBP13.93□□□□□ -0.18
SF3B3-205ENST00000564899 USPL1Q5W0Q7 1092 aa13.93□□□□□ -0.18
SF3B3-205ENST00000564899 B4GALNT3Q6L9W6 998 aa13.93□□□□□ -0.18
SF3B3-205ENST00000564899 CCDC136Q96JN2 1154 aa13.93□□□□□ -0.18
SF3B3-205ENST00000564899 MEIS3Q99687 375 aa13.93□□□□□ -0.18
SF3B3-205ENST00000564899 TBC1D2BQ9UPU7 963 aa13.93□□□□□ -0.18
SF3B3-205ENST00000564899 DLEC1Q9Y238 1755 aa13.93□□□□□ -0.18
SF3B3-205ENST00000564899 NRXN2Q9P2S2 1712 aa13.93□□□□□ -0.18
SF3B3-205ENST00000564899 ARFGEF2Q9Y6D5 1785 aa13.92□□□□□ -0.18
SF3B3-205ENST00000564899 NEURL1BA8MQ27 555 aa13.92□□□□□ -0.18
SF3B3-205ENST00000564899 ERVV-1B6SEH8 477 aa13.92□□□□□ -0.18
SF3B3-205ENST00000564899 NFKBIEO00221 500 aa13.92□□□□□ -0.18
SF3B3-205ENST00000564899 IGKV5-2P06315 115 aa13.92□□□□□ -0.18
SF3B3-205ENST00000564899 C1orf115Q9H7X2 142 aa13.92□□□□□ -0.18
SF3B3-205ENST00000564899 ATP5J2-PTCD1G3V325 749 aa13.91□□□□□ -0.18
SF3B3-205ENST00000564899 CAMTA2O94983 1202 aa13.91□□□□□ -0.18
SF3B3-205ENST00000564899 GNAI3P08754 354 aa13.91□□□□□ -0.18
SF3B3-205ENST00000564899 POTEIP0CG38 1075 aa13.91□□□□□ -0.18
SF3B3-205ENST00000564899 POTEJP0CG39 1038 aa13.91□□□□□ -0.18
SF3B3-205ENST00000564899 TCIRG1Q13488 830 aa13.91□□□□□ -0.18
SF3B3-205ENST00000564899 NFIXQ14938 502 aa13.91□□□□□ -0.18
SF3B3-205ENST00000564899 HSP90AB3PQ58FF7 597 aa13.91□□□□□ -0.18
SF3B3-205ENST00000564899 GIGYF2Q6Y7W6 1299 aaKnown RBP13.91□□□□□ -0.18
SF3B3-205ENST00000564899 BCL2L12Q9HB09 334 aa13.91□□□□□ -0.18
SF3B3-205ENST00000564899 IBTKQ9P2D0 1353 aaPredicted RBP13.91□□□□□ -0.18
SF3B3-205ENST00000564899 GLTPD2A6NH11 291 aa13.9□□□□□ -0.18
SF3B3-205ENST00000564899 UBTFL1P0CB47 393 aaPredicted RBP13.9□□□□□ -0.18
SF3B3-205ENST00000564899 HLFQ16534 295 aa13.9□□□□□ -0.18
SF3B3-205ENST00000564899 ISCA1Q9BUE6 129 aa13.9□□□□□ -0.18
SF3B3-205ENST00000564899 USP44Q9H0E7 712 aa13.9□□□□□ -0.18
SF3B3-205ENST00000564899 C9orf78Q9NZ63 289 aaPredicted RBP13.9□□□□□ -0.18
SF3B3-205ENST00000564899 PCDHB15Q9Y5E8 787 aa13.9□□□□□ -0.18
SF3B3-205ENST00000564899 GRM8O00222 908 aa13.89□□□□□ -0.19
SF3B3-205ENST00000564899 GNAI2P04899 355 aa13.89□□□□□ -0.19
SF3B3-205ENST00000564899 GCKRQ14397 625 aa13.89□□□□□ -0.19
SF3B3-205ENST00000564899 CWC25Q9NXE8 425 aaPredicted RBP13.89□□□□□ -0.19
SF3B3-205ENST00000564899 ZNF652Q9Y2D9 606 aa13.89□□□□□ -0.19
SF3B3-205ENST00000564899 ANKRD31Q8N7Z5 1873 aa13.89□□□□□ -0.19
SF3B3-205ENST00000564899 COL11A2P13942 1736 aaPredicted RBP13.88□□□□□ -0.19
SF3B3-205ENST00000564899 VEGFAP15692 232 aaPredicted RBP13.88□□□□□ -0.19
SF3B3-205ENST00000564899 LMNB1P20700 586 aa13.88□□□□□ -0.19
SF3B3-205ENST00000564899 NARFQ9UHQ1 456 aa13.88□□□□□ -0.19
SF3B3-205ENST00000564899 RGL2O15211 777 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms