RNA–Protein interactions for RNA: ENST00000564709.5

SPSB3-206, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 2,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-206ENST00000564709 BOLA2Q9H3K6 86 aa26.9■■□□□ 1.9
SPSB3-206ENST00000564709 LRSAM1Q6UWE0 723 aa26.89■■□□□ 1.9
SPSB3-206ENST00000564709 CCDC171Q6TFL3 1326 aa26.89■■□□□ 1.89
SPSB3-206ENST00000564709 AFDNP55196 1824 aaKnown RBP26.88■■□□□ 1.89
SPSB3-206ENST00000564709 CYP27B1O15528 508 aa26.88■■□□□ 1.89
SPSB3-206ENST00000564709 TTC5Q8N0Z6 440 aa26.88■■□□□ 1.89
SPSB3-206ENST00000564709 METTL22Q9BUU2 404 aaPredicted RBP26.88■■□□□ 1.89
SPSB3-206ENST00000564709 STRCP1A6NGW2 1772 aa26.88■■□□□ 1.89
SPSB3-206ENST00000564709 TPRNQ4KMQ1 711 aa26.87■■□□□ 1.89
SPSB3-206ENST00000564709 USP48Q86UV5 1035 aa26.87■■□□□ 1.89
SPSB3-206ENST00000564709 PDRG1Q9NUG6 133 aa26.87■■□□□ 1.89
SPSB3-206ENST00000564709 CCDC83Q8IWF9 413 aa26.87■■□□□ 1.89
SPSB3-206ENST00000564709 RBM8AQ9Y5S9 174 aaKnown RBP26.87■■□□□ 1.89
SPSB3-206ENST00000564709 ANKRD13DQ6ZTN6 518 aa26.86■■□□□ 1.89
SPSB3-206ENST00000564709 A0A0D9SFI3 127 aa26.85■■□□□ 1.89
SPSB3-206ENST00000564709 KCNJ4P48050 445 aa26.85■■□□□ 1.89
SPSB3-206ENST00000564709 FSD1Q9BTV5 496 aa26.85■■□□□ 1.89
SPSB3-206ENST00000564709 SMC3Q9UQE7 1217 aa26.85■■□□□ 1.89
SPSB3-206ENST00000564709 NECTIN1Q15223 517 aa26.85■■□□□ 1.89
SPSB3-206ENST00000564709 LRP10Q7Z4F1 713 aa26.85■■□□□ 1.89
SPSB3-206ENST00000564709 SNRPA1P09661 255 aaKnown RBP26.84■■□□□ 1.89
SPSB3-206ENST00000564709 SYT1P21579 422 aa26.84■■□□□ 1.89
SPSB3-206ENST00000564709 CNPY2Q9Y2B0 182 aa26.84■■□□□ 1.89
SPSB3-206ENST00000564709 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.84■■□□□ 1.89
SPSB3-206ENST00000564709 COL9A3Q14050 684 aaPredicted RBP26.84■■□□□ 1.89
SPSB3-206ENST00000564709 EDC3Q96F86 508 aaKnown RBP26.84■■□□□ 1.89
SPSB3-206ENST00000564709 CYP46A1Q9Y6A2 500 aa26.84■■□□□ 1.89
SPSB3-206ENST00000564709 ZSCAN22P10073 491 aaPredicted RBP26.83■■□□□ 1.89
SPSB3-206ENST00000564709 CREB3L3Q68CJ9 461 aa26.83■■□□□ 1.89
SPSB3-206ENST00000564709 DCAF5Q96JK2 942 aa26.83■■□□□ 1.89
SPSB3-206ENST00000564709 NAP1L5Q96NT1 182 aaPredicted RBP26.83■■□□□ 1.89
SPSB3-206ENST00000564709 ZSWIM6Q9HCJ5 1215 aa26.83■■□□□ 1.89
SPSB3-206ENST00000564709 ARFGEF2Q9Y6D5 1785 aa26.83■■□□□ 1.89
SPSB3-206ENST00000564709 ATP5J2-PTCD1G3V325 749 aa26.83■■□□□ 1.89
SPSB3-206ENST00000564709 STX6O43752 255 aa26.83■■□□□ 1.89
SPSB3-206ENST00000564709 PTCD1O75127 700 aaKnown RBP26.83■■□□□ 1.89
SPSB3-206ENST00000564709 VPS53Q5VIR6 699 aa26.83■■□□□ 1.89
SPSB3-206ENST00000564709 UBE3BQ7Z3V4 1068 aa26.83■■□□□ 1.89
SPSB3-206ENST00000564709 RNF214Q8ND24 703 aa26.83■■□□□ 1.89
SPSB3-206ENST00000564709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.83■■□□□ 1.89
SPSB3-206ENST00000564709 MRC1P22897 1456 aa26.83■■□□□ 1.88
SPSB3-206ENST00000564709 FMNL2Q96PY5 1086 aa26.82■■□□□ 1.88
SPSB3-206ENST00000564709 TNS3Q68CZ2 1445 aa26.81■■□□□ 1.88
SPSB3-206ENST00000564709 PKD1L3Q7Z443 1732 aa26.81■■□□□ 1.88
SPSB3-206ENST00000564709 KCNB2Q92953 911 aa26.81■■□□□ 1.88
SPSB3-206ENST00000564709 ZKSCAN1P17029 563 aaPredicted RBP26.81■■□□□ 1.88
SPSB3-206ENST00000564709 GJB2P29033 226 aa26.81■■□□□ 1.88
SPSB3-206ENST00000564709 HIP1O00291 1037 aa26.8■■□□□ 1.88
SPSB3-206ENST00000564709 CABP4P57796 275 aa26.8■■□□□ 1.88
SPSB3-206ENST00000564709 ST3GAL1Q11201 340 aa26.8■■□□□ 1.88
SPSB3-206ENST00000564709 MAP4K1Q92918 833 aa26.8■■□□□ 1.88
SPSB3-206ENST00000564709 NECAB1Q8N987 351 aa26.79■■□□□ 1.88
SPSB3-206ENST00000564709 TM6SF1Q9BZW5 370 aa26.79■■□□□ 1.88
SPSB3-206ENST00000564709 TAF6LQ9Y6J9 622 aa26.79■■□□□ 1.88
SPSB3-206ENST00000564709 NDUFB9Q9Y6M9 179 aa26.79■■□□□ 1.88
SPSB3-206ENST00000564709 SLC27A2O14975 620 aa26.79■■□□□ 1.88
SPSB3-206ENST00000564709 F13A1P00488 732 aa26.78■■□□□ 1.88
SPSB3-206ENST00000564709 TFCP2Q12800 502 aa26.78■■□□□ 1.88
SPSB3-206ENST00000564709 ME3Q16798 604 aa26.78■■□□□ 1.88
SPSB3-206ENST00000564709 ZNF589Q86UQ0 364 aaPredicted RBP26.78■■□□□ 1.88
SPSB3-206ENST00000564709 TCEANC2Q96MN5 208 aa26.78■■□□□ 1.88
SPSB3-206ENST00000564709 RFX5P48382 616 aaPredicted RBP26.78■■□□□ 1.88
SPSB3-206ENST00000564709 DBNLQ9UJU6 430 aaKnown RBP26.78■■□□□ 1.88
SPSB3-206ENST00000564709 PTPN12Q05209 780 aaKnown RBP26.77■■□□□ 1.88
SPSB3-206ENST00000564709 SYAP1Q96A49 352 aaPredicted RBP26.77■■□□□ 1.88
SPSB3-206ENST00000564709 GLI3P10071 1580 aa26.77■■□□□ 1.88
SPSB3-206ENST00000564709 ABCC6O95255 1503 aa26.77■■□□□ 1.88
SPSB3-206ENST00000564709 MED23Q9ULK4 1368 aa26.76■■□□□ 1.87
SPSB3-206ENST00000564709 A0A087WZG4 1122 aa26.76■■□□□ 1.87
SPSB3-206ENST00000564709 FIBPO43427 364 aa26.76■■□□□ 1.87
SPSB3-206ENST00000564709 ZSCAN30Q86W11 494 aa26.76■■□□□ 1.87
SPSB3-206ENST00000564709 COPRSQ9NQ92 184 aa26.76■■□□□ 1.87
SPSB3-206ENST00000564709 TPCN1Q9ULQ1 816 aa26.76■■□□□ 1.87
SPSB3-206ENST00000564709 PRKCSHP14314 528 aaPredicted RBP26.76■■□□□ 1.87
SPSB3-206ENST00000564709 PDLIM2Q96JY6 352 aa26.76■■□□□ 1.87
SPSB3-206ENST00000564709 TSPY26PQ9H489 355 aa26.76■■□□□ 1.87
SPSB3-206ENST00000564709 TNNI3KQ59H18 835 aa26.75■■□□□ 1.87
SPSB3-206ENST00000564709 FPGT-TNNI3KV9GXZ4 949 aa26.75■■□□□ 1.87
SPSB3-206ENST00000564709 LAMB4A4D0S4 1761 aa26.75■■□□□ 1.87
SPSB3-206ENST00000564709 CHGBP05060 677 aa26.74■■□□□ 1.87
SPSB3-206ENST00000564709 TMEM87AQ8NBN3 555 aa26.74■■□□□ 1.87
SPSB3-206ENST00000564709 ZSCAN31Q96LW9 406 aaPredicted RBP26.74■■□□□ 1.87
SPSB3-206ENST00000564709 SH2B1Q9NRF2 756 aaPredicted RBP26.74■■□□□ 1.87
SPSB3-206ENST00000564709 CCDC9Q9Y3X0 531 aaKnown RBP26.74■■□□□ 1.87
SPSB3-206ENST00000564709 DCCP43146 1447 aa26.74■■□□□ 1.87
SPSB3-206ENST00000564709 SNRKQ9NRH2 765 aa26.74■■□□□ 1.87
SPSB3-206ENST00000564709 MTMR6Q9Y217 621 aa26.73■■□□□ 1.87
SPSB3-206ENST00000564709 SPATA31A3Q5VYP0 1347 aa26.73■■□□□ 1.87
SPSB3-206ENST00000564709 VPS37CA5D8V6 355 aaPredicted RBP26.73■■□□□ 1.87
SPSB3-206ENST00000564709 CADPS2Q86UW7 1296 aa26.72■■□□□ 1.87
SPSB3-206ENST00000564709 RABL6Q3YEC7 729 aaPredicted RBP26.72■■□□□ 1.87
SPSB3-206ENST00000564709 DNAJC2Q99543 621 aaKnown RBP26.72■■□□□ 1.87
SPSB3-206ENST00000564709 DBNDD2Q9BQY9 259 aa26.72■■□□□ 1.87
SPSB3-206ENST00000564709 CHMP3Q9Y3E7 222 aa26.72■■□□□ 1.87
SPSB3-206ENST00000564709 COL15A1P39059 1388 aa26.71■■□□□ 1.87
SPSB3-206ENST00000564709 MSNP26038 577 aaKnown RBP26.71■■□□□ 1.87
SPSB3-206ENST00000564709 DNM1Q05193 864 aaKnown RBP26.71■■□□□ 1.87
SPSB3-206ENST00000564709 BLOC1S2Q6QNY1 142 aa26.71■■□□□ 1.87
SPSB3-206ENST00000564709 NBPF26B4DH59 902 aa26.7■■□□□ 1.86
SPSB3-206ENST00000564709 ATP5JP18859 108 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms