RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 SH3TC1Q8TE82 1336 aa20.32■□□□□ 0.84
RAB40C-208ENST00000564703 NTSR2O95665 410 aa20.32■□□□□ 0.84
RAB40C-208ENST00000564703 CHRNA5P30532 468 aa20.32■□□□□ 0.84
RAB40C-208ENST00000564703 ZNF622Q969S3 477 aaKnown RBP eCLIP20.32■□□□□ 0.84
RAB40C-208ENST00000564703 NLRP3Q96P20 1036 aa20.32■□□□□ 0.84
RAB40C-208ENST00000564703 CWC25Q9NXE8 425 aaPredicted RBP20.32■□□□□ 0.84
RAB40C-208ENST00000564703 SRCAPQ6ZRS2 3230 aa20.32■□□□□ 0.84
RAB40C-208ENST00000564703 IBTKQ9P2D0 1353 aaPredicted RBP20.32■□□□□ 0.84
RAB40C-208ENST00000564703 NRXN2Q9P2S2 1712 aa20.31■□□□□ 0.84
RAB40C-208ENST00000564703 HSP90B1P14625 803 aaKnown RBP20.31■□□□□ 0.84
RAB40C-208ENST00000564703 RARSP54136 660 aaKnown RBP20.31■□□□□ 0.84
RAB40C-208ENST00000564703 WWC3Q9ULE0 1092 aa20.31■□□□□ 0.84
RAB40C-208ENST00000564703 ADCY9O60503 1353 aa20.31■□□□□ 0.84
RAB40C-208ENST00000564703 PTPRCP08575 1304 aa20.3■□□□□ 0.84
RAB40C-208ENST00000564703 SLC10A5Q5PT55 438 aa20.3■□□□□ 0.84
RAB40C-208ENST00000564703 SLC4A10Q6U841 1118 aa20.3■□□□□ 0.84
RAB40C-208ENST00000564703 LINS1Q8NG48 757 aa20.3■□□□□ 0.84
RAB40C-208ENST00000564703 BCS1LQ9Y276 419 aa20.3■□□□□ 0.84
RAB40C-208ENST00000564703 KIF13BQ9NQT8 1826 aa20.3■□□□□ 0.84
RAB40C-208ENST00000564703 F6X3S4 739 aa20.29■□□□□ 0.84
RAB40C-208ENST00000564703 GRIN3BO60391 1043 aa20.29■□□□□ 0.84
RAB40C-208ENST00000564703 KCNA3P22001 575 aa20.29■□□□□ 0.84
RAB40C-208ENST00000564703 DALRD3Q5D0E6 543 aaKnown RBP20.29■□□□□ 0.84
RAB40C-208ENST00000564703 ZBTB38Q8NAP3 1195 aaPredicted RBP20.29■□□□□ 0.84
RAB40C-208ENST00000564703 FAM89AQ96GI7 184 aa20.29■□□□□ 0.84
RAB40C-208ENST00000564703 MASTLQ96GX5 879 aa20.29■□□□□ 0.84
RAB40C-208ENST00000564703 ARFGEF2Q9Y6D5 1785 aa20.29■□□□□ 0.84
RAB40C-208ENST00000564703 IPO8O15397 1037 aaKnown RBP20.28■□□□□ 0.84
RAB40C-208ENST00000564703 SRGNP10124 158 aa20.28■□□□□ 0.84
RAB40C-208ENST00000564703 RTL5Q5HYW3 569 aaPredicted RBP20.28■□□□□ 0.84
RAB40C-208ENST00000564703 TTLL6Q8N841 843 aa20.28■□□□□ 0.84
RAB40C-208ENST00000564703 CNKSR1Q969H4 720 aa20.28■□□□□ 0.84
RAB40C-208ENST00000564703 PXDNLA1KZ92 1463 aa20.28■□□□□ 0.84
RAB40C-208ENST00000564703 ANKRD36CQ5JPF3 1778 aa20.28■□□□□ 0.84
RAB40C-208ENST00000564703 PCCAP05165 728 aaPredicted RBP20.27■□□□□ 0.84
RAB40C-208ENST00000564703 IGKV5-2P06315 115 aa20.27■□□□□ 0.84
RAB40C-208ENST00000564703 NPR1P16066 1061 aa20.27■□□□□ 0.84
RAB40C-208ENST00000564703 BRPF1P55201 1214 aaPredicted RBP20.27■□□□□ 0.84
RAB40C-208ENST00000564703 CWF19L2Q2TBE0 894 aaKnown RBP20.27■□□□□ 0.84
RAB40C-208ENST00000564703 STYK1Q6J9G0 422 aa20.27■□□□□ 0.84
RAB40C-208ENST00000564703 RPGRQ92834 1020 aaKnown RBP20.27■□□□□ 0.84
RAB40C-208ENST00000564703 NOB1Q9ULX3 412 aaKnown RBP20.27■□□□□ 0.84
RAB40C-208ENST00000564703 N4BP2Q86UW6 1770 aaPredicted RBP20.26■□□□□ 0.83
RAB40C-208ENST00000564703 KLRG2A4D1S0 409 aaPredicted RBP20.26■□□□□ 0.83
RAB40C-208ENST00000564703 NEURL1BA8MQ27 555 aa20.26■□□□□ 0.83
RAB40C-208ENST00000564703 HCLS1P14317 486 aaPredicted RBP20.26■□□□□ 0.83
RAB40C-208ENST00000564703 ALDH1B1P30837 517 aa20.26■□□□□ 0.83
RAB40C-208ENST00000564703 API5Q9BZZ5 524 aaKnown RBP20.26■□□□□ 0.83
RAB40C-208ENST00000564703 IRS4O14654 1257 aaPredicted RBP20.25■□□□□ 0.83
RAB40C-208ENST00000564703 SYNE4Q8N205 404 aa20.25■□□□□ 0.83
RAB40C-208ENST00000564703 SRCIN1Q9C0H9 1055 aa20.25■□□□□ 0.83
RAB40C-208ENST00000564703 KIF16BQ96L93 1317 aa20.25■□□□□ 0.83
RAB40C-208ENST00000564703 GCKRQ14397 625 aa20.24■□□□□ 0.83
RAB40C-208ENST00000564703 BEND3Q5T5X7 828 aa20.24■□□□□ 0.83
RAB40C-208ENST00000564703 FRAT1Q92837 279 aaPredicted RBP20.24■□□□□ 0.83
RAB40C-208ENST00000564703 RBM17Q96I25 401 aaKnown RBP20.24■□□□□ 0.83
RAB40C-208ENST00000564703 ABCC12Q96J65 1359 aa20.23■□□□□ 0.83
RAB40C-208ENST00000564703 BCAR3O75815 825 aa20.23■□□□□ 0.83
RAB40C-208ENST00000564703 ALDH1L1O75891 902 aa20.23■□□□□ 0.83
RAB40C-208ENST00000564703 ARHGAP45Q92619 1136 aa20.23■□□□□ 0.83
RAB40C-208ENST00000564703 JARID2Q92833 1246 aaPredicted RBP20.23■□□□□ 0.83
RAB40C-208ENST00000564703 C9orf78Q9NZ63 289 aaPredicted RBP20.23■□□□□ 0.83
RAB40C-208ENST00000564703 H7C1W4 665 aa20.22■□□□□ 0.83
RAB40C-208ENST00000564703 YBX3P16989 372 aaKnown RBP eCLIP20.22■□□□□ 0.83
RAB40C-208ENST00000564703 CRY2Q49AN0 593 aa20.22■□□□□ 0.83
RAB40C-208ENST00000564703 ANKRD31Q8N7Z5 1873 aa20.22■□□□□ 0.83
RAB40C-208ENST00000564703 RIC1Q4ADV7 1423 aa20.21■□□□□ 0.83
RAB40C-208ENST00000564703 PDE8AO60658 829 aa20.21■□□□□ 0.83
RAB40C-208ENST00000564703 ARHGAP27Q6ZUM4 889 aa20.21■□□□□ 0.83
RAB40C-208ENST00000564703 DDX46Q7L014 1031 aaKnown RBP20.21■□□□□ 0.83
RAB40C-208ENST00000564703 UBE3BQ7Z3V4 1068 aa20.21■□□□□ 0.83
RAB40C-208ENST00000564703 TMX4Q9H1E5 349 aaPredicted RBP20.21■□□□□ 0.83
RAB40C-208ENST00000564703 HOXA10P31260 410 aaPredicted RBP20.2■□□□□ 0.82
RAB40C-208ENST00000564703 CRAMP1Q96RY5 1269 aa20.2■□□□□ 0.82
RAB40C-208ENST00000564703 CCT4P50991 539 aaKnown RBP20.19■□□□□ 0.82
RAB40C-208ENST00000564703 ZNF219Q9P2Y4 722 aaPredicted RBP20.19■□□□□ 0.82
RAB40C-208ENST00000564703 CDHR2Q9BYE9 1310 aa20.19■□□□□ 0.82
RAB40C-208ENST00000564703 SF3B3Q15393 1217 aaKnown RBP20.18■□□□□ 0.82
RAB40C-208ENST00000564703 SOGA3Q5TF21 947 aa20.18■□□□□ 0.82
RAB40C-208ENST00000564703 ZKSCAN2Q63HK3 967 aa20.18■□□□□ 0.82
RAB40C-208ENST00000564703 PRPF40BQ6NWY9 871 aaKnown RBP20.18■□□□□ 0.82
RAB40C-208ENST00000564703 C3orf67Q6ZVT6 689 aa20.18■□□□□ 0.82
RAB40C-208ENST00000564703 KIAA1551Q9HCM1 1747 aa20.17■□□□□ 0.82
RAB40C-208ENST00000564703 GRM8O00222 908 aa20.17■□□□□ 0.82
RAB40C-208ENST00000564703 C21orf2O43822 256 aa20.17■□□□□ 0.82
RAB40C-208ENST00000564703 CCDC152Q4G0S7 254 aa20.17■□□□□ 0.82
RAB40C-208ENST00000564703 ATF7IPQ6VMQ6 1270 aa20.17■□□□□ 0.82
RAB40C-208ENST00000564703 RCAN3Q9UKA8 241 aa20.17■□□□□ 0.82
RAB40C-208ENST00000564703 BBOX1O75936 387 aa20.16■□□□□ 0.82
RAB40C-208ENST00000564703 HDAC5Q9UQL6 1122 aa20.15■□□□□ 0.82
RAB40C-208ENST00000564703 CTSWP56202 376 aa20.13■□□□□ 0.81
RAB40C-208ENST00000564703 GRAPQ13588 217 aa20.13■□□□□ 0.81
RAB40C-208ENST00000564703 CC2D2BQ6DHV5 1058 aa20.13■□□□□ 0.81
RAB40C-208ENST00000564703 GRAPLQ8TC17 118 aaPredicted RBP20.13■□□□□ 0.81
RAB40C-208ENST00000564703 CLUAP1Q96AJ1 413 aa20.13■□□□□ 0.81
RAB40C-208ENST00000564703 CCDC85AQ96PX6 553 aaPredicted RBP20.13■□□□□ 0.81
RAB40C-208ENST00000564703 PLA2G12BQ9BX93 195 aa20.13■□□□□ 0.81
RAB40C-208ENST00000564703 BRCA1P38398 1863 aaKnown RBP20.13■□□□□ 0.81
RAB40C-208ENST00000564703 DLEC1Q9Y238 1755 aa20.13■□□□□ 0.81
RAB40C-208ENST00000564703 ABCC4O15439 1325 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms