RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 ANXA1P04083 346 aa9.25□□□□□ -0.93
MAP1LC3B-205ENST00000564638 IL6STP40189 918 aaPredicted RBP9.25□□□□□ -0.93
MAP1LC3B-205ENST00000564638 FLIIQ13045 1269 aa9.25□□□□□ -0.93
MAP1LC3B-205ENST00000564638 HDGFL1Q5TGJ6 251 aa9.25□□□□□ -0.93
MAP1LC3B-205ENST00000564638 USPL1Q5W0Q7 1092 aa9.25□□□□□ -0.93
MAP1LC3B-205ENST00000564638 CHD1LQ86WJ1 897 aa9.25□□□□□ -0.93
MAP1LC3B-205ENST00000564638 TBC1D2BQ9UPU7 963 aa9.25□□□□□ -0.93
MAP1LC3B-205ENST00000564638 NBPF26B4DH59 902 aa9.24□□□□□ -0.93
MAP1LC3B-205ENST00000564638 GYS1P13807 737 aa9.24□□□□□ -0.93
MAP1LC3B-205ENST00000564638 EIF5P55010 431 aaKnown RBP9.24□□□□□ -0.93
MAP1LC3B-205ENST00000564638 FKBP5Q13451 457 aaPredicted RBP9.24□□□□□ -0.93
MAP1LC3B-205ENST00000564638 NBPF10Q6P3W6 841 aaKnown RBP9.24□□□□□ -0.93
MAP1LC3B-205ENST00000564638 G2E3Q7L622 706 aa9.24□□□□□ -0.93
MAP1LC3B-205ENST00000564638 DZIP3Q86Y13 1208 aaKnown RBP9.24□□□□□ -0.93
MAP1LC3B-205ENST00000564638 RPAP2Q8IXW5 612 aaPredicted RBP9.24□□□□□ -0.93
MAP1LC3B-205ENST00000564638 NBPF15Q8N660 670 aa9.24□□□□□ -0.93
MAP1LC3B-205ENST00000564638 ANKRD44Q8N8A2 993 aa9.24□□□□□ -0.93
MAP1LC3B-205ENST00000564638 USP42Q9H9J4 1324 aaKnown RBP9.24□□□□□ -0.93
MAP1LC3B-205ENST00000564638 SCN7AQ01118 1682 aa9.23□□□□□ -0.93
MAP1LC3B-205ENST00000564638 BCORQ6W2J9 1755 aa9.23□□□□□ -0.93
MAP1LC3B-205ENST00000564638 HMMRO75330 724 aa9.23□□□□□ -0.93
MAP1LC3B-205ENST00000564638 AIMP1Q12904 312 aaKnown RBP9.23□□□□□ -0.93
MAP1LC3B-205ENST00000564638 SLC4A10Q6U841 1118 aa9.23□□□□□ -0.93
MAP1LC3B-205ENST00000564638 BICDL1Q6ZP65 573 aa9.23□□□□□ -0.93
MAP1LC3B-205ENST00000564638 LNPKQ9C0E8 428 aa9.23□□□□□ -0.93
MAP1LC3B-205ENST00000564638 GPBP1L1Q9HC44 474 aaPredicted RBP9.23□□□□□ -0.93
MAP1LC3B-205ENST00000564638 CHPF2Q9P2E5 772 aa9.23□□□□□ -0.93
MAP1LC3B-205ENST00000564638 DAXXQ9UER7 740 aaPredicted RBP9.23□□□□□ -0.93
MAP1LC3B-205ENST00000564638 NARFQ9UHQ1 456 aa9.23□□□□□ -0.93
MAP1LC3B-205ENST00000564638 ERBB4Q15303 1308 aa9.23□□□□□ -0.93
MAP1LC3B-205ENST00000564638 GNAI3P08754 354 aa9.22□□□□□ -0.93
MAP1LC3B-205ENST00000564638 MMP10P09238 476 aa9.22□□□□□ -0.93
MAP1LC3B-205ENST00000564638 PROSER3Q2NL68 480 aa9.22□□□□□ -0.93
MAP1LC3B-205ENST00000564638 ANKRD45Q5TZF3 282 aa9.22□□□□□ -0.93
MAP1LC3B-205ENST00000564638 CEP85Q6P2H3 762 aa9.22□□□□□ -0.93
MAP1LC3B-205ENST00000564638 KIF6Q6ZMV9 814 aa9.22□□□□□ -0.93
MAP1LC3B-205ENST00000564638 SIRT2Q8IXJ6 389 aa9.22□□□□□ -0.93
MAP1LC3B-205ENST00000564638 NLGN1Q8N2Q7 840 aa9.22□□□□□ -0.93
MAP1LC3B-205ENST00000564638 JMYQ8N9B5 988 aa9.22□□□□□ -0.93
MAP1LC3B-205ENST00000564638 ZNF526Q8TF50 670 aaPredicted RBP9.22□□□□□ -0.93
MAP1LC3B-205ENST00000564638 MEIS3Q99687 375 aa9.22□□□□□ -0.93
MAP1LC3B-205ENST00000564638 F6X3S4 739 aa9.21□□□□□ -0.94
MAP1LC3B-205ENST00000564638 CAMTA2O94983 1202 aa9.21□□□□□ -0.94
MAP1LC3B-205ENST00000564638 HTRA3P83110 453 aa9.21□□□□□ -0.94
MAP1LC3B-205ENST00000564638 PDIA6Q15084 440 aa9.21□□□□□ -0.94
MAP1LC3B-205ENST00000564638 BMP2KLQ5H9B9 411 aa9.21□□□□□ -0.94
MAP1LC3B-205ENST00000564638 TTLL7Q6ZT98 887 aa9.21□□□□□ -0.94
MAP1LC3B-205ENST00000564638 XAGE3Q8WTP9 111 aa9.21□□□□□ -0.94
MAP1LC3B-205ENST00000564638 ZBTB3Q9H5J0 574 aa9.21□□□□□ -0.94
MAP1LC3B-205ENST00000564638 DCTPP1Q9H773 170 aa9.21□□□□□ -0.94
MAP1LC3B-205ENST00000564638 DDX21Q9NR30 783 aaKnown RBP eCLIP9.21□□□□□ -0.94
MAP1LC3B-205ENST00000564638 PARP3Q9Y6F1 533 aa9.21□□□□□ -0.94
MAP1LC3B-205ENST00000564638 NUP98P52948 1817 aa9.21□□□□□ -0.94
MAP1LC3B-205ENST00000564638 MYCNP04198 464 aaPredicted RBP9.2□□□□□ -0.94
MAP1LC3B-205ENST00000564638 GNAI2P04899 355 aa9.2□□□□□ -0.94
MAP1LC3B-205ENST00000564638 APLP1P51693 650 aa9.2□□□□□ -0.94
MAP1LC3B-205ENST00000564638 TNS4Q8IZW8 715 aa9.2□□□□□ -0.94
MAP1LC3B-205ENST00000564638 BCL2L12Q9HB09 334 aa9.2□□□□□ -0.94
MAP1LC3B-205ENST00000564638 DBF4Q9UBU7 674 aaPredicted RBP9.2□□□□□ -0.94
MAP1LC3B-205ENST00000564638 ZNF652Q9Y2D9 606 aa9.2□□□□□ -0.94
MAP1LC3B-205ENST00000564638 AFDNP55196 1824 aaKnown RBP9.19□□□□□ -0.94
MAP1LC3B-205ENST00000564638 FAM177BA6PVY3 158 aa9.19□□□□□ -0.94
MAP1LC3B-205ENST00000564638 NPHP1O15259 732 aa9.19□□□□□ -0.94
MAP1LC3B-205ENST00000564638 EIF5BO60841 1220 aaKnown RBP9.19□□□□□ -0.94
MAP1LC3B-205ENST00000564638 DDR1Q08345 913 aa9.19□□□□□ -0.94
MAP1LC3B-205ENST00000564638 NFIXQ14938 502 aa9.19□□□□□ -0.94
MAP1LC3B-205ENST00000564638 HLFQ16534 295 aa9.19□□□□□ -0.94
MAP1LC3B-205ENST00000564638 TBC1D9BQ66K14 1250 aa9.19□□□□□ -0.94
MAP1LC3B-205ENST00000564638 COPS6Q7L5N1 327 aa9.19□□□□□ -0.94
MAP1LC3B-205ENST00000564638 HYPKQ9NX55 129 aa9.19□□□□□ -0.94
MAP1LC3B-205ENST00000564638 MAP3K15Q6ZN16 1313 aa9.19□□□□□ -0.94
MAP1LC3B-205ENST00000564638 POLRMTO00411 1230 aaKnown RBP9.18□□□□□ -0.94
MAP1LC3B-205ENST00000564638 UBTFL1P0CB47 393 aaPredicted RBP9.18□□□□□ -0.94
MAP1LC3B-205ENST00000564638 GPTP24298 496 aa9.18□□□□□ -0.94
MAP1LC3B-205ENST00000564638 BECN1Q14457 450 aa9.18□□□□□ -0.94
MAP1LC3B-205ENST00000564638 TBC1D32Q96NH3 1257 aa9.18□□□□□ -0.94
MAP1LC3B-205ENST00000564638 SETDB2Q96T68 719 aa9.18□□□□□ -0.94
MAP1LC3B-205ENST00000564638 SRCIN1Q9C0H9 1055 aa9.18□□□□□ -0.94
MAP1LC3B-205ENST00000564638 PHAXQ9H814 394 aaKnown RBP9.18□□□□□ -0.94
MAP1LC3B-205ENST00000564638 NIP7Q9Y221 180 aaKnown RBP eCLIP9.18□□□□□ -0.94
MAP1LC3B-205ENST00000564638 ANKRD36CQ5JPF3 1778 aa9.17□□□□□ -0.94
MAP1LC3B-205ENST00000564638 WDR90Q96KV7 1748 aa9.17□□□□□ -0.94
MAP1LC3B-205ENST00000564638 GRIN3BO60391 1043 aa9.17□□□□□ -0.94
MAP1LC3B-205ENST00000564638 SEC24BO95487 1268 aa9.17□□□□□ -0.94
MAP1LC3B-205ENST00000564638 SERPINB2P05120 415 aa9.17□□□□□ -0.94
MAP1LC3B-205ENST00000564638 TM4SF1P30408 202 aa9.17□□□□□ -0.94
MAP1LC3B-205ENST00000564638 MFAP1P55081 439 aaKnown RBP9.17□□□□□ -0.94
MAP1LC3B-205ENST00000564638 LRP10Q7Z4F1 713 aa9.17□□□□□ -0.94
MAP1LC3B-205ENST00000564638 DNAAF4Q8WXU2 420 aa9.17□□□□□ -0.94
MAP1LC3B-205ENST00000564638 ARFGEF2Q9Y6D5 1785 aa9.17□□□□□ -0.94
MAP1LC3B-205ENST00000564638 CARMIL3Q8ND23 1372 aa9.16□□□□□ -0.94
MAP1LC3B-205ENST00000564638 ERVV-1B6SEH8 477 aa9.16□□□□□ -0.94
MAP1LC3B-205ENST00000564638 CDC45O75419 566 aa9.16□□□□□ -0.94
MAP1LC3B-205ENST00000564638 CLEC4GQ6UXB4 293 aa9.16□□□□□ -0.94
MAP1LC3B-205ENST00000564638 GIGYF2Q6Y7W6 1299 aaKnown RBP9.16□□□□□ -0.94
MAP1LC3B-205ENST00000564638 RIC3Q7Z5B4 369 aa9.16□□□□□ -0.94
MAP1LC3B-205ENST00000564638 NBPF5PQ86XG9 351 aaPredicted RBP9.16□□□□□ -0.94
MAP1LC3B-205ENST00000564638 CCDC24Q8N4L8 307 aa9.16□□□□□ -0.94
MAP1LC3B-205ENST00000564638 KLRG1Q96E93 195 aa9.16□□□□□ -0.94
MAP1LC3B-205ENST00000564638 WWC3Q9ULE0 1092 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms