RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 ADGRE1Q14246 886 aa6.6□□□□□ -1.35
CHD9-211ENST00000564600 TPCN2Q8NHX9 752 aa6.6□□□□□ -1.35
CHD9-211ENST00000564600 TP53INP1Q96A56 240 aa6.6□□□□□ -1.35
CHD9-211ENST00000564600 CALR3Q96L12 384 aaKnown RBP6.6□□□□□ -1.35
CHD9-211ENST00000564600 PHACTR1Q9C0D0 580 aa6.6□□□□□ -1.35
CHD9-211ENST00000564600 JPH1Q9HDC5 661 aaPredicted RBP6.6□□□□□ -1.35
CHD9-211ENST00000564600 MAFBQ9Y5Q3 323 aaPredicted RBP6.6□□□□□ -1.35
CHD9-211ENST00000564600 HYAL3O43820 417 aaPredicted RBP6.59□□□□□ -1.35
CHD9-211ENST00000564600 DKK1O94907 266 aa6.59□□□□□ -1.35
CHD9-211ENST00000564600 TYRO3Q06418 890 aa6.59□□□□□ -1.35
CHD9-211ENST00000564600 NACC1Q96RE7 527 aa6.59□□□□□ -1.35
CHD9-211ENST00000564600 PPP1R12CQ9BZL4 782 aa6.59□□□□□ -1.35
CHD9-211ENST00000564600 MKRN1Q9UHC7 482 aaKnown RBP6.59□□□□□ -1.35
CHD9-211ENST00000564600 NAGPAQ9UK23 515 aa6.59□□□□□ -1.35
CHD9-211ENST00000564600 LZTS3O60299 673 aaPredicted RBP6.58□□□□□ -1.36
CHD9-211ENST00000564600 LILRB5O75023 590 aa6.58□□□□□ -1.36
CHD9-211ENST00000564600 PLAURQ03405 335 aa6.58□□□□□ -1.36
CHD9-211ENST00000564600 DMRTC2Q8IXT2 367 aaPredicted RBP6.58□□□□□ -1.36
CHD9-211ENST00000564600 OGFOD1Q8N543 542 aa6.58□□□□□ -1.36
CHD9-211ENST00000564600 SUSD3Q96L08 255 aa6.58□□□□□ -1.36
CHD9-211ENST00000564600 PRDM6Q9NQX0 595 aa6.58□□□□□ -1.36
CHD9-211ENST00000564600 SLC6A14Q9UN76 642 aa6.58□□□□□ -1.36
CHD9-211ENST00000564600 KCNH4Q9UQ05 1017 aa6.58□□□□□ -1.36
CHD9-211ENST00000564600 TXNRD3Q86VQ6 643 aa6.57□□□□□ -1.36
CHD9-211ENST00000564600 NGLY1Q96IV0 654 aa6.57□□□□□ -1.36
CHD9-211ENST00000564600 ZNF594Q96JF6 807 aaPredicted RBP6.57□□□□□ -1.36
CHD9-211ENST00000564600 USP21Q9UK80 565 aa6.57□□□□□ -1.36
CHD9-211ENST00000564600 C9orf172C9J069 976 aa6.56□□□□□ -1.36
CHD9-211ENST00000564600 LRP8Q14114 963 aa6.56□□□□□ -1.36
CHD9-211ENST00000564600 CFAP70Q5T0N1 1121 aa6.56□□□□□ -1.36
CHD9-211ENST00000564600 KANK4Q5T7N3 995 aaPredicted RBP6.56□□□□□ -1.36
CHD9-211ENST00000564600 CCDC102BQ68D86 513 aa6.56□□□□□ -1.36
CHD9-211ENST00000564600 PSAPL1Q6NUJ1 521 aa6.56□□□□□ -1.36
CHD9-211ENST00000564600 TSEN2Q8NCE0 465 aaKnown RBP6.56□□□□□ -1.36
CHD9-211ENST00000564600 KRTAP9-9Q9BYP9 154 aa6.56□□□□□ -1.36
CHD9-211ENST00000564600 KRTAP9-4Q9BYQ2 154 aa6.56□□□□□ -1.36
CHD9-211ENST00000564600 GTF3C3Q9Y5Q9 886 aa6.56□□□□□ -1.36
CHD9-211ENST00000564600 ELNP15502 786 aa6.55□□□□□ -1.36
CHD9-211ENST00000564600 LMOD1P29536 600 aaPredicted RBP6.55□□□□□ -1.36
CHD9-211ENST00000564600 AFF1P51825 1210 aaKnown RBP6.55□□□□□ -1.36
CHD9-211ENST00000564600 CRTC2Q53ET0 693 aaPredicted RBP6.55□□□□□ -1.36
CHD9-211ENST00000564600 KRTAP19-1Q8IUB9 90 aa6.55□□□□□ -1.36
CHD9-211ENST00000564600 DNAJB12Q9NXW2 375 aaKnown RBP6.55□□□□□ -1.36
CHD9-211ENST00000564600 PSMA6P60900 246 aaKnown RBP6.54□□□□□ -1.36
CHD9-211ENST00000564600 NEUROD1Q13562 356 aa6.54□□□□□ -1.36
CHD9-211ENST00000564600 TRIM50Q86XT4 487 aa6.54□□□□□ -1.36
CHD9-211ENST00000564600 CHMP7Q8WUX9 453 aaPredicted RBP6.54□□□□□ -1.36
CHD9-211ENST00000564600 C21orf2O43822 256 aa6.53□□□□□ -1.36
CHD9-211ENST00000564600 PPP1R12BO60237 982 aaPredicted RBP6.53□□□□□ -1.36
CHD9-211ENST00000564600 H2AFB1P0C5Y9 115 aa6.53□□□□□ -1.36
CHD9-211ENST00000564600 H2AFB2P0C5Z0 115 aa6.53□□□□□ -1.36
CHD9-211ENST00000564600 CPB1P15086 417 aa6.53□□□□□ -1.36
CHD9-211ENST00000564600 NFKB1P19838 968 aa6.53□□□□□ -1.36
CHD9-211ENST00000564600 RASA1P20936 1047 aa6.53□□□□□ -1.36
CHD9-211ENST00000564600 IREB2P48200 963 aaKnown RBP6.53□□□□□ -1.36
CHD9-211ENST00000564600 RAC1P63000 192 aa6.53□□□□□ -1.36
CHD9-211ENST00000564600 MLLT1Q03111 559 aaPredicted RBP6.53□□□□□ -1.36
CHD9-211ENST00000564600 KRT25Q7Z3Z0 450 aa6.53□□□□□ -1.36
CHD9-211ENST00000564600 FMR1NBQ8N0W7 255 aaPredicted RBP6.53□□□□□ -1.36
CHD9-211ENST00000564600 SIX5Q8N196 739 aa6.53□□□□□ -1.36
CHD9-211ENST00000564600 LARGE2Q8N3Y3 721 aa6.53□□□□□ -1.36
CHD9-211ENST00000564600 LENG1Q96BZ8 264 aaPredicted RBP6.53□□□□□ -1.36
CHD9-211ENST00000564600 ZMYND15Q9H091 742 aa6.53□□□□□ -1.36
CHD9-211ENST00000564600 GRNP28799 593 aaKnown RBP6.52□□□□□ -1.37
CHD9-211ENST00000564600 ATP1A2P50993 1020 aa6.52□□□□□ -1.37
CHD9-211ENST00000564600 KCNQ4P56696 695 aa6.52□□□□□ -1.37
CHD9-211ENST00000564600 PTK7Q13308 1070 aa6.52□□□□□ -1.37
CHD9-211ENST00000564600 CDCA8Q53HL2 280 aa6.52□□□□□ -1.37
CHD9-211ENST00000564600 BTLAQ7Z6A9 289 aa6.52□□□□□ -1.37
CHD9-211ENST00000564600 ALDH16A1Q8IZ83 802 aa6.52□□□□□ -1.37
CHD9-211ENST00000564600 SSBP4Q9BWG4 385 aaPredicted RBP6.52□□□□□ -1.37
CHD9-211ENST00000564600 NOS3P29474 1203 aa6.51□□□□□ -1.37
CHD9-211ENST00000564600 MEGF10Q96KG7 1140 aa6.51□□□□□ -1.37
CHD9-211ENST00000564600 ARID3CA6NKF2 412 aa6.5□□□□□ -1.37
CHD9-211ENST00000564600 RFX1P22670 979 aa6.5□□□□□ -1.37
CHD9-211ENST00000564600 C1orf53Q5VUE5 145 aa6.5□□□□□ -1.37
CHD9-211ENST00000564600 FAM35AQ86V20 835 aa6.5□□□□□ -1.37
CHD9-211ENST00000564600 WFDC12Q8WWY7 111 aa6.5□□□□□ -1.37
CHD9-211ENST00000564600 ARXQ96QS3 562 aa6.5□□□□□ -1.37
CHD9-211ENST00000564600 GSX2Q9BZM3 304 aa6.5□□□□□ -1.37
CHD9-211ENST00000564600 USP17L15C9J2P7 530 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 USP17L10C9JJH3 530 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 USP17L13C9JLJ4 530 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 USP17L12C9JPN9 530 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 USP17L11C9JVI0 530 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 USP17L21D6R901 530 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 USP17L18D6R9N7 530 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 USP17L22D6RA61 530 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 USP17L17D6RBQ6 530 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 USP17L19D6RCP7 530 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 USP17L20D6RJB6 530 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 RGS9O75916 674 aaPredicted RBP6.49□□□□□ -1.37
CHD9-211ENST00000564600 ALX3O95076 343 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 USP17L24Q0WX57 530 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 DPYDQ12882 1025 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 HFE2Q6ZVN8 426 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 SCG3Q8WXD2 468 aaKnown RBP6.49□□□□□ -1.37
CHD9-211ENST00000564600 PNMA5Q96PV4 448 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 ANKIB1Q9P2G1 1089 aa6.49□□□□□ -1.37
CHD9-211ENST00000564600 BCS1LQ9Y276 419 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms