RNA–Protein interactions for RNA: ENST00000564502.1

NPIPB13-205, Transcript of nuclear pore complex interacting protein family, member B13, human

TSL 4

Gene NPIPB13, Length 543 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB13-205	ENST00000564502	BEGAIN	Q9BUH8	593 aa		12.92	□□□□□ -0.34
NPIPB13-205	ENST00000564502	TMOD3	Q9NYL9	352 aa		12.92	□□□□□ -0.34
NPIPB13-205	ENST00000564502	MRC1	P22897	1456 aa		12.91	□□□□□ -0.34
NPIPB13-205	ENST00000564502	SHANK3	Q9BYB0	1731 aa		12.91	□□□□□ -0.34
NPIPB13-205	ENST00000564502	RARS	P54136	660 aa	Known RBP	12.91	□□□□□ -0.34
NPIPB13-205	ENST00000564502	EIF4A1	P60842	406 aa	Known RBP	12.91	□□□□□ -0.34
NPIPB13-205	ENST00000564502	SKIV2L	Q15477	1246 aa	Known RBP	12.91	□□□□□ -0.34
NPIPB13-205	ENST00000564502	ALDH1L2	Q3SY69	923 aa		12.91	□□□□□ -0.34
NPIPB13-205	ENST00000564502	ZNF790	Q6PG37	636 aa		12.91	□□□□□ -0.34
NPIPB13-205	ENST00000564502	ZNF710	Q8N1W2	664 aa		12.91	□□□□□ -0.34
NPIPB13-205	ENST00000564502	TSPYL6	Q8N831	410 aa		12.91	□□□□□ -0.34
NPIPB13-205	ENST00000564502	RBM46	Q8TBY0	533 aa	Known RBP	12.91	□□□□□ -0.34
NPIPB13-205	ENST00000564502	GPR153	Q6NV75	609 aa		12.9	□□□□□ -0.34
NPIPB13-205	ENST00000564502	SCUBE2	Q9NQ36	999 aa		12.9	□□□□□ -0.34
NPIPB13-205	ENST00000564502	KCNQ3	O43525	872 aa		12.89	□□□□□ -0.35
NPIPB13-205	ENST00000564502	HOXB7	P09629	217 aa		12.89	□□□□□ -0.35
NPIPB13-205	ENST00000564502	RRP1	P56182	461 aa	Known RBP	12.89	□□□□□ -0.35
NPIPB13-205	ENST00000564502	SLC39A6	Q13433	755 aa		12.89	□□□□□ -0.35
NPIPB13-205	ENST00000564502	KRT24	Q2M2I5	525 aa		12.89	□□□□□ -0.35
NPIPB13-205	ENST00000564502	KRT27	Q7Z3Y8	459 aa		12.89	□□□□□ -0.35
NPIPB13-205	ENST00000564502	SYTL4	Q96C24	671 aa	Predicted RBP	12.89	□□□□□ -0.35
NPIPB13-205	ENST00000564502	SMC4	Q9NTJ3	1288 aa		12.89	□□□□□ -0.35
NPIPB13-205	ENST00000564502	VIRMA	Q69YN4	1812 aa	Known RBP	12.89	□□□□□ -0.35
NPIPB13-205	ENST00000564502	RNF123	Q5XPI4	1314 aa		12.88	□□□□□ -0.35
NPIPB13-205	ENST00000564502	BCAR3	O75815	825 aa		12.88	□□□□□ -0.35
NPIPB13-205	ENST00000564502	CANX	P27824	592 aa	Known RBP	12.88	□□□□□ -0.35
NPIPB13-205	ENST00000564502	PPP4R3B	Q5MIZ7	849 aa		12.88	□□□□□ -0.35
NPIPB13-205	ENST00000564502	CCDC30	Q5VVM6	783 aa		12.88	□□□□□ -0.35
NPIPB13-205	ENST00000564502	MAMSTR	Q6ZN01	415 aa		12.88	□□□□□ -0.35
NPIPB13-205	ENST00000564502	FMNL2	Q96PY5	1086 aa		12.88	□□□□□ -0.35
NPIPB13-205	ENST00000564502	THSD7A	Q9UPZ6	1657 aa		12.88	□□□□□ -0.35
NPIPB13-205	ENST00000564502	UTRN	P46939	3433 aa		12.88	□□□□□ -0.35
NPIPB13-205	ENST00000564502	TNS1	Q9HBL0	1735 aa	Known RBP	12.88	□□□□□ -0.35
NPIPB13-205	ENST00000564502	SIPA1L3	O60292	1781 aa	Predicted RBP	12.87	□□□□□ -0.35
NPIPB13-205	ENST00000564502	POTEJ	P0CG39	1038 aa		12.87	□□□□□ -0.35
NPIPB13-205	ENST00000564502	R3HDM1	Q15032	1099 aa	Known RBP	12.87	□□□□□ -0.35
NPIPB13-205	ENST00000564502	NLRP7	Q8WX94	980 aa		12.87	□□□□□ -0.35
NPIPB13-205	ENST00000564502	SSH1	Q8WYL5	1049 aa		12.87	□□□□□ -0.35
NPIPB13-205	ENST00000564502	PIGB	Q92521	554 aa		12.87	□□□□□ -0.35
NPIPB13-205	ENST00000564502	ACSBG1	Q96GR2	724 aa		12.87	□□□□□ -0.35
NPIPB13-205	ENST00000564502	BCL2L13	Q9BXK5	485 aa		12.87	□□□□□ -0.35
NPIPB13-205	ENST00000564502	STK31	Q9BXU1	1019 aa		12.87	□□□□□ -0.35
NPIPB13-205	ENST00000564502	KDM3B	Q7LBC6	1761 aa		12.86	□□□□□ -0.35
NPIPB13-205	ENST00000564502	IPO8	O15397	1037 aa	Known RBP	12.86	□□□□□ -0.35
NPIPB13-205	ENST00000564502	GIGYF1	O75420	1035 aa	Predicted RBP	12.86	□□□□□ -0.35
NPIPB13-205	ENST00000564502	SNRPA1	P09661	255 aa	Known RBP	12.86	□□□□□ -0.35
NPIPB13-205	ENST00000564502	FRAT1	Q92837	279 aa	Predicted RBP	12.86	□□□□□ -0.35
NPIPB13-205	ENST00000564502	BCL9	O00512	1426 aa		12.86	□□□□□ -0.35
NPIPB13-205	ENST00000564502	KIF16B	Q96L93	1317 aa		12.86	□□□□□ -0.35
NPIPB13-205	ENST00000564502	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.85	□□□□□ -0.35
NPIPB13-205	ENST00000564502	BAG6	P46379	1132 aa		12.85	□□□□□ -0.35
NPIPB13-205	ENST00000564502	HDGFL1	Q5TGJ6	251 aa		12.85	□□□□□ -0.35
NPIPB13-205	ENST00000564502	ZNF496	Q96IT1	587 aa	Predicted RBP	12.85	□□□□□ -0.35
NPIPB13-205	ENST00000564502	CAMKK2	Q96RR4	588 aa		12.85	□□□□□ -0.35
NPIPB13-205	ENST00000564502	LHX6	Q9UPM6	363 aa		12.85	□□□□□ -0.35
NPIPB13-205	ENST00000564502	HEG1	Q9ULI3	1381 aa		12.84	□□□□□ -0.35
NPIPB13-205	ENST00000564502	TCERG1	O14776	1098 aa	Known RBP	12.84	□□□□□ -0.35
NPIPB13-205	ENST00000564502	PLIN1	O60240	522 aa		12.84	□□□□□ -0.35
NPIPB13-205	ENST00000564502	EIF2S2	P20042	333 aa	Known RBP	12.84	□□□□□ -0.35
NPIPB13-205	ENST00000564502	SF3B2	Q13435	895 aa	Known RBP	12.84	□□□□□ -0.35
NPIPB13-205	ENST00000564502	DIXDC1	Q155Q3	683 aa		12.84	□□□□□ -0.35
NPIPB13-205	ENST00000564502	FAM182B	Q5T319	152 aa		12.84	□□□□□ -0.35
NPIPB13-205	ENST00000564502	ZKSCAN2	Q63HK3	967 aa		12.84	□□□□□ -0.35
NPIPB13-205	ENST00000564502	MRPL50	Q8N5N7	158 aa	Known RBP	12.84	□□□□□ -0.35
NPIPB13-205	ENST00000564502	SMARCC1	Q92922	1105 aa	Predicted RBP	12.84	□□□□□ -0.35
NPIPB13-205	ENST00000564502	BCL2L12	Q9HB09	334 aa		12.84	□□□□□ -0.35
NPIPB13-205	ENST00000564502	ATG3	Q9NT62	314 aa		12.84	□□□□□ -0.35
NPIPB13-205	ENST00000564502	ASAP1	Q9ULH1	1129 aa		12.84	□□□□□ -0.35
NPIPB13-205	ENST00000564502	TOGARAM1	Q9Y4F4	1720 aa		12.83	□□□□□ -0.36
NPIPB13-205	ENST00000564502	PTCD1	O75127	700 aa	Known RBP	12.83	□□□□□ -0.36
NPIPB13-205	ENST00000564502	YY1	P25490	414 aa		12.83	□□□□□ -0.36
NPIPB13-205	ENST00000564502	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.83	□□□□□ -0.36
NPIPB13-205	ENST00000564502	NOB1	Q9ULX3	412 aa	Known RBP	12.83	□□□□□ -0.36
NPIPB13-205	ENST00000564502	PPP1R3G	B7ZBB8	358 aa		12.82	□□□□□ -0.36
NPIPB13-205	ENST00000564502	EZH2	Q15910	746 aa	Known RBP	12.82	□□□□□ -0.36
NPIPB13-205	ENST00000564502	FAM196A	Q6ZSG2	479 aa		12.82	□□□□□ -0.36
NPIPB13-205	ENST00000564502	NECTIN2	Q92692	538 aa		12.82	□□□□□ -0.36
NPIPB13-205	ENST00000564502	DOT1L	Q8TEK3	1739 aa		12.82	□□□□□ -0.36
NPIPB13-205	ENST00000564502	CEP350	Q5VT06	3117 aa		12.82	□□□□□ -0.36
NPIPB13-205	ENST00000564502	ITGB4	P16144	1822 aa		12.81	□□□□□ -0.36
NPIPB13-205	ENST00000564502	KAT6B	Q8WYB5	2073 aa		12.81	□□□□□ -0.36
NPIPB13-205	ENST00000564502	KCNQ2	O43526	872 aa		12.81	□□□□□ -0.36
NPIPB13-205	ENST00000564502	IRX6	P78412	446 aa	Predicted RBP	12.81	□□□□□ -0.36
NPIPB13-205	ENST00000564502	PDE3A	Q14432	1141 aa		12.81	□□□□□ -0.36
NPIPB13-205	ENST00000564502	ARHGAP45	Q92619	1136 aa		12.81	□□□□□ -0.36
NPIPB13-205	ENST00000564502	DBF4	Q9UBU7	674 aa	Predicted RBP	12.81	□□□□□ -0.36
NPIPB13-205	ENST00000564502	POTEB2	H3BUK9	544 aa		12.8	□□□□□ -0.36
NPIPB13-205	ENST00000564502	PTPRE	P23469	700 aa		12.8	□□□□□ -0.36
NPIPB13-205	ENST00000564502	MYSM1	Q5VVJ2	828 aa		12.8	□□□□□ -0.36
NPIPB13-205	ENST00000564502	ERICH6B	Q5W0A0	696 aa		12.8	□□□□□ -0.36
NPIPB13-205	ENST00000564502	ATF7IP	Q6VMQ6	1270 aa		12.8	□□□□□ -0.36
NPIPB13-205	ENST00000564502	API5	Q9BZZ5	524 aa	Known RBP	12.8	□□□□□ -0.36
NPIPB13-205	ENST00000564502	USP16	Q9Y5T5	823 aa		12.8	□□□□□ -0.36
NPIPB13-205	ENST00000564502	PTPRC	P08575	1304 aa		12.8	□□□□□ -0.36
NPIPB13-205	ENST00000564502	PRAMEF22	A3QJZ6	481 aa		12.79	□□□□□ -0.36
NPIPB13-205	ENST00000564502	CLK2	P49760	499 aa	Known RBP	12.79	□□□□□ -0.36
NPIPB13-205	ENST00000564502	FTSJ3	Q8IY81	847 aa	Known RBP	12.79	□□□□□ -0.36
NPIPB13-205	ENST00000564502	DZIP1L	Q8IYY4	767 aa	Known RBP	12.79	□□□□□ -0.36
NPIPB13-205	ENST00000564502	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
NPIPB13-205	ENST00000564502	POLR3E	Q9NVU0	708 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms