RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 CALD1Q05682 793 aaKnown RBP19.56■□□□□ 0.72
SPG7-210ENST00000564409 CFAP44Q96MT7 982 aa19.56■□□□□ 0.72
SPG7-210ENST00000564409 PSMD1Q99460 953 aa19.56■□□□□ 0.72
SPG7-210ENST00000564409 SCN4AP35499 1836 aa19.55■□□□□ 0.72
SPG7-210ENST00000564409 POTECB2RU33 542 aa19.55■□□□□ 0.72
SPG7-210ENST00000564409 SLC10A5Q5PT55 438 aa19.55■□□□□ 0.72
SPG7-210ENST00000564409 RBM17Q96I25 401 aaKnown RBP19.55■□□□□ 0.72
SPG7-210ENST00000564409 NLRP3Q96P20 1036 aa19.55■□□□□ 0.72
SPG7-210ENST00000564409 UTP14AQ9BVJ6 771 aaKnown RBP19.55■□□□□ 0.72
SPG7-210ENST00000564409 IQCA1LA6NCM1 817 aa19.54■□□□□ 0.72
SPG7-210ENST00000564409 PROSER3Q2NL68 480 aa19.54■□□□□ 0.72
SPG7-210ENST00000564409 COPS6Q7L5N1 327 aa19.54■□□□□ 0.72
SPG7-210ENST00000564409 L3MBTL3Q96JM7 780 aaPredicted RBP19.54■□□□□ 0.72
SPG7-210ENST00000564409 LAS1LQ9Y4W2 734 aaKnown RBP19.54■□□□□ 0.72
SPG7-210ENST00000564409 ZEB1P37275 1124 aaPredicted RBP19.53■□□□□ 0.72
SPG7-210ENST00000564409 DDNO94850 711 aaPredicted RBP19.52■□□□□ 0.72
SPG7-210ENST00000564409 IARSP41252 1262 aaKnown RBP19.52■□□□□ 0.72
SPG7-210ENST00000564409 TCIRG1Q13488 830 aa19.52■□□□□ 0.72
SPG7-210ENST00000564409 HDGFL1Q5TGJ6 251 aa19.52■□□□□ 0.72
SPG7-210ENST00000564409 SYNE4Q8N205 404 aa19.52■□□□□ 0.72
SPG7-210ENST00000564409 XAGE3Q8WTP9 111 aa19.52■□□□□ 0.72
SPG7-210ENST00000564409 ZNF277Q9NRM2 450 aaPredicted RBP19.52■□□□□ 0.72
SPG7-210ENST00000564409 DBF4Q9UBU7 674 aaPredicted RBP19.52■□□□□ 0.72
SPG7-210ENST00000564409 SNED1Q8TER0 1413 aa19.51■□□□□ 0.71
SPG7-210ENST00000564409 ANXA1P04083 346 aa19.51■□□□□ 0.71
SPG7-210ENST00000564409 CHMP4AQ9BY43 222 aa19.51■□□□□ 0.71
SPG7-210ENST00000564409 TMX4Q9H1E5 349 aaPredicted RBP19.51■□□□□ 0.71
SPG7-210ENST00000564409 GNAI1P63096 354 aa19.5■□□□□ 0.71
SPG7-210ENST00000564409 AIMP1Q12904 312 aaKnown RBP19.5■□□□□ 0.71
SPG7-210ENST00000564409 NLRP10Q86W26 655 aa19.5■□□□□ 0.71
SPG7-210ENST00000564409 JDP2Q8WYK2 163 aa19.5■□□□□ 0.71
SPG7-210ENST00000564409 NECTIN2Q92692 538 aa19.5■□□□□ 0.71
SPG7-210ENST00000564409 KLRG1Q96E93 195 aa19.5■□□□□ 0.71
SPG7-210ENST00000564409 IFT57Q9NWB7 429 aa19.5■□□□□ 0.71
SPG7-210ENST00000564409 HYPKQ9NX55 129 aa19.5■□□□□ 0.71
SPG7-210ENST00000564409 FZD9O00144 591 aa19.49■□□□□ 0.71
SPG7-210ENST00000564409 ZNF853P0CG23 659 aa19.49■□□□□ 0.71
SPG7-210ENST00000564409 KRT24Q2M2I5 525 aa19.49■□□□□ 0.71
SPG7-210ENST00000564409 OLFM4Q6UX06 510 aa19.49■□□□□ 0.71
SPG7-210ENST00000564409 PLBD2Q8NHP8 589 aa19.49■□□□□ 0.71
SPG7-210ENST00000564409 VPS33BQ9H267 617 aa19.49■□□□□ 0.71
SPG7-210ENST00000564409 CHPF2Q9P2E5 772 aa19.49■□□□□ 0.71
SPG7-210ENST00000564409 APAF1O14727 1248 aa19.48■□□□□ 0.71
SPG7-210ENST00000564409 PPEF1O14829 653 aaPredicted RBP19.48■□□□□ 0.71
SPG7-210ENST00000564409 IFFO2Q5TF58 517 aa19.48■□□□□ 0.71
SPG7-210ENST00000564409 DUSP27Q5VZP5 1158 aa19.48■□□□□ 0.71
SPG7-210ENST00000564409 CHADLQ6NUI6 762 aa19.48■□□□□ 0.71
SPG7-210ENST00000564409 ANKRD13DQ6ZTN6 518 aa19.48■□□□□ 0.71
SPG7-210ENST00000564409 MBIPQ9NS73 344 aa19.48■□□□□ 0.71
SPG7-210ENST00000564409 SH3TC1Q8TE82 1336 aa19.48■□□□□ 0.71
SPG7-210ENST00000564409 BBOX1O75936 387 aa19.47■□□□□ 0.71
SPG7-210ENST00000564409 GPC2Q8N158 579 aa19.47■□□□□ 0.71
SPG7-210ENST00000564409 JMYQ8N9B5 988 aa19.47■□□□□ 0.71
SPG7-210ENST00000564409 TRMT112Q9UI30 125 aaKnown RBP19.47■□□□□ 0.71
SPG7-210ENST00000564409 LAMB2P55268 1798 aa19.47■□□□□ 0.71
SPG7-210ENST00000564409 TAF1DQ9H5J8 278 aaPredicted RBP19.46■□□□□ 0.71
SPG7-210ENST00000564409 ATP6V0A2Q9Y487 856 aa19.46■□□□□ 0.71
SPG7-210ENST00000564409 EIF6P56537 245 aaKnown RBP19.45■□□□□ 0.7
SPG7-210ENST00000564409 C3orf67Q6ZVT6 689 aa19.45■□□□□ 0.7
SPG7-210ENST00000564409 TMC4Q7Z404 712 aa19.45■□□□□ 0.7
SPG7-210ENST00000564409 LDHDQ86WU2 507 aa19.45■□□□□ 0.7
SPG7-210ENST00000564409 HACL1Q9UJ83 578 aa19.45■□□□□ 0.7
SPG7-210ENST00000564409 ZNF541Q9H0D2 1346 aa19.45■□□□□ 0.7
SPG7-210ENST00000564409 TRIM28Q13263 835 aaKnown RBP19.44■□□□□ 0.7
SPG7-210ENST00000564409 DDX46Q7L014 1031 aaKnown RBP19.44■□□□□ 0.7
SPG7-210ENST00000564409 PNMA8AQ86V59 439 aaPredicted RBP19.44■□□□□ 0.7
SPG7-210ENST00000564409 SUPT20HQ8NEM7 779 aa19.44■□□□□ 0.7
SPG7-210ENST00000564409 SP8Q8IXZ3 490 aa19.43■□□□□ 0.7
SPG7-210ENST00000564409 LARGE2Q8N3Y3 721 aa19.43■□□□□ 0.7
SPG7-210ENST00000564409 ISCA1Q9BUE6 129 aa19.43■□□□□ 0.7
SPG7-210ENST00000564409 ABCC4O15439 1325 aa19.43■□□□□ 0.7
SPG7-210ENST00000564409 HSP90B1P14625 803 aaKnown RBP19.42■□□□□ 0.7
SPG7-210ENST00000564409 HTRA3P83110 453 aa19.42■□□□□ 0.7
SPG7-210ENST00000564409 NCBP3Q53F19 620 aaKnown RBP19.42■□□□□ 0.7
SPG7-210ENST00000564409 RTFDC1Q9BY42 306 aaPredicted RBP19.42■□□□□ 0.7
SPG7-210ENST00000564409 HCLS1P14317 486 aaPredicted RBP19.41■□□□□ 0.7
SPG7-210ENST00000564409 EPHX2P34913 555 aa19.41■□□□□ 0.7
SPG7-210ENST00000564409 NIM1KQ8IY84 436 aa19.41■□□□□ 0.7
SPG7-210ENST00000564409 CREBZFQ9NS37 354 aa19.41■□□□□ 0.7
SPG7-210ENST00000564409 GOLGA2Q08379 1002 aa19.4■□□□□ 0.7
SPG7-210ENST00000564409 GRAPQ13588 217 aa19.4■□□□□ 0.7
SPG7-210ENST00000564409 CCDC27Q2M243 656 aa19.4■□□□□ 0.7
SPG7-210ENST00000564409 GRAPLQ8TC17 118 aaPredicted RBP19.4■□□□□ 0.7
SPG7-210ENST00000564409 DDX60Q8IY21 1712 aaKnown RBP19.39■□□□□ 0.7
SPG7-210ENST00000564409 TCERG1O14776 1098 aaKnown RBP19.39■□□□□ 0.69
SPG7-210ENST00000564409 POTEIP0CG38 1075 aa19.39■□□□□ 0.69
SPG7-210ENST00000564409 POTEJP0CG39 1038 aa19.39■□□□□ 0.69
SPG7-210ENST00000564409 SF3B3Q15393 1217 aaKnown RBP19.39■□□□□ 0.69
SPG7-210ENST00000564409 CCDC30Q5VVM6 783 aa19.39■□□□□ 0.69
SPG7-210ENST00000564409 ADAMTSL1Q8N6G6 1762 aa19.39■□□□□ 0.69
SPG7-210ENST00000564409 PPIP5K2O43314 1243 aa19.38■□□□□ 0.69
SPG7-210ENST00000564409 LMOD1P29536 600 aaPredicted RBP19.38■□□□□ 0.69
SPG7-210ENST00000564409 DPP8Q6V1X1 898 aaPredicted RBP19.38■□□□□ 0.69
SPG7-210ENST00000564409 RIC3Q7Z5B4 369 aa19.38■□□□□ 0.69
SPG7-210ENST00000564409 MPNDQ8N594 471 aa19.38■□□□□ 0.69
SPG7-210ENST00000564409 COL4A5P29400 1685 aa19.37■□□□□ 0.69
SPG7-210ENST00000564409 PASKQ96RG2 1323 aa19.37■□□□□ 0.69
SPG7-210ENST00000564409 DDX58O95786 925 aaKnown RBP19.37■□□□□ 0.69
SPG7-210ENST00000564409 EAPPQ56P03 285 aaPredicted RBP19.37■□□□□ 0.69
SPG7-210ENST00000564409 FAM89AQ96GI7 184 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms