RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 C3orf67Q6ZVT6 689 aa25.9■■□□□ 1.74
SHCBP1-203ENST00000564272 UTP14AQ9BVJ6 771 aaKnown RBP25.9■■□□□ 1.74
SHCBP1-203ENST00000564272 KDM2BQ8NHM5 1336 aa25.89■■□□□ 1.74
SHCBP1-203ENST00000564272 DICER1Q9UPY3 1922 aaKnown RBP25.89■■□□□ 1.74
SHCBP1-203ENST00000564272 CCDC27Q2M243 656 aa25.89■■□□□ 1.74
SHCBP1-203ENST00000564272 CCDC93Q567U6 631 aa25.89■■□□□ 1.74
SHCBP1-203ENST00000564272 C8orf58Q8NAV2 365 aa25.89■■□□□ 1.74
SHCBP1-203ENST00000564272 TSR2Q969E8 191 aaKnown RBP25.89■■□□□ 1.74
SHCBP1-203ENST00000564272 TCIRG1Q13488 830 aa25.88■■□□□ 1.73
SHCBP1-203ENST00000564272 NLRP10Q86W26 655 aa25.88■■□□□ 1.73
SHCBP1-203ENST00000564272 WWC1Q8IX03 1113 aa25.88■■□□□ 1.73
SHCBP1-203ENST00000564272 RPGRQ92834 1020 aaKnown RBP25.88■■□□□ 1.73
SHCBP1-203ENST00000564272 HYPKQ9NX55 129 aa25.88■■□□□ 1.73
SHCBP1-203ENST00000564272 ALDH1B1P30837 517 aa25.87■■□□□ 1.73
SHCBP1-203ENST00000564272 PLBD2Q8NHP8 589 aa25.87■■□□□ 1.73
SHCBP1-203ENST00000564272 ZNF428Q96B54 188 aa25.87■■□□□ 1.73
SHCBP1-203ENST00000564272 HOXA10P31260 410 aaPredicted RBP25.85■■□□□ 1.73
SHCBP1-203ENST00000564272 ANKRD13DQ6ZTN6 518 aa25.85■■□□□ 1.73
SHCBP1-203ENST00000564272 TSPYL6Q8N831 410 aa25.85■■□□□ 1.73
SHCBP1-203ENST00000564272 LAMB2P55268 1798 aa25.84■■□□□ 1.73
SHCBP1-203ENST00000564272 SYNE4Q8N205 404 aa25.84■■□□□ 1.73
SHCBP1-203ENST00000564272 RRAGCQ9HB90 399 aa25.84■■□□□ 1.73
SHCBP1-203ENST00000564272 RNF123Q5XPI4 1314 aa25.84■■□□□ 1.73
SHCBP1-203ENST00000564272 GLTPD2A6NH11 291 aa25.83■■□□□ 1.73
SHCBP1-203ENST00000564272 SLC10A5Q5PT55 438 aa25.83■■□□□ 1.73
SHCBP1-203ENST00000564272 SLC51AQ86UW1 340 aa25.83■■□□□ 1.73
SHCBP1-203ENST00000564272 RBM17Q96I25 401 aaKnown RBP25.83■■□□□ 1.73
SHCBP1-203ENST00000564272 PHAXQ9H814 394 aaKnown RBP25.83■■□□□ 1.73
SHCBP1-203ENST00000564272 TRMT112Q9UI30 125 aaKnown RBP25.83■■□□□ 1.73
SHCBP1-203ENST00000564272 SNED1Q8TER0 1413 aa25.82■■□□□ 1.72
SHCBP1-203ENST00000564272 TOMM70O94826 608 aa25.82■■□□□ 1.72
SHCBP1-203ENST00000564272 HCLS1P14317 486 aaPredicted RBP25.82■■□□□ 1.72
SHCBP1-203ENST00000564272 FKBP4Q02790 459 aaKnown RBP eCLIP25.82■■□□□ 1.72
SHCBP1-203ENST00000564272 NLRP3Q96P20 1036 aa25.82■■□□□ 1.72
SHCBP1-203ENST00000564272 SALL2Q9Y467 1007 aaPredicted RBP25.82■■□□□ 1.72
SHCBP1-203ENST00000564272 ATP5J2-PTCD1G3V325 749 aa25.81■■□□□ 1.72
SHCBP1-203ENST00000564272 RTKN2Q8IZC4 609 aa25.81■■□□□ 1.72
SHCBP1-203ENST00000564272 ISCA1Q9BUE6 129 aa25.81■■□□□ 1.72
SHCBP1-203ENST00000564272 ZNF277Q9NRM2 450 aaPredicted RBP25.81■■□□□ 1.72
SHCBP1-203ENST00000564272 SH3TC1Q8TE82 1336 aa25.81■■□□□ 1.72
SHCBP1-203ENST00000564272 NCBP3Q53F19 620 aaKnown RBP25.8■■□□□ 1.72
SHCBP1-203ENST00000564272 C16orf71Q8IYS4 520 aaPredicted RBP25.8■■□□□ 1.72
SHCBP1-203ENST00000564272 FAM9BQ8IZU0 186 aa25.8■■□□□ 1.72
SHCBP1-203ENST00000564272 CRAMP1Q96RY5 1269 aa25.8■■□□□ 1.72
SHCBP1-203ENST00000564272 IL16Q14005 1332 aa25.8■■□□□ 1.72
SHCBP1-203ENST00000564272 GOLGA2Q08379 1002 aa25.79■■□□□ 1.72
SHCBP1-203ENST00000564272 CCDC30Q5VVM6 783 aa25.79■■□□□ 1.72
SHCBP1-203ENST00000564272 DDX60Q8IY21 1712 aaKnown RBP25.79■■□□□ 1.72
SHCBP1-203ENST00000564272 TCERG1O14776 1098 aaKnown RBP25.78■■□□□ 1.72
SHCBP1-203ENST00000564272 PPEF1O14829 653 aaPredicted RBP25.78■■□□□ 1.72
SHCBP1-203ENST00000564272 HSPA6P17066 643 aa25.78■■□□□ 1.72
SHCBP1-203ENST00000564272 RIC3Q7Z5B4 369 aa25.78■■□□□ 1.72
SHCBP1-203ENST00000564272 ABCC4O15439 1325 aa25.78■■□□□ 1.72
SHCBP1-203ENST00000564272 WDR90Q96KV7 1748 aa25.77■■□□□ 1.72
SHCBP1-203ENST00000564272 RBM46Q8TBY0 533 aaKnown RBP25.77■■□□□ 1.72
SHCBP1-203ENST00000564272 FANCIQ9NVI1 1328 aa25.76■■□□□ 1.71
SHCBP1-203ENST00000564272 TWISTNBQ3B726 338 aaPredicted RBP25.75■■□□□ 1.71
SHCBP1-203ENST00000564272 DPY19L2Q6NUT2 758 aa25.75■■□□□ 1.71
SHCBP1-203ENST00000564272 FAM89AQ96GI7 184 aa25.75■■□□□ 1.71
SHCBP1-203ENST00000564272 IARSP41252 1262 aaKnown RBP25.74■■□□□ 1.71
SHCBP1-203ENST00000564272 CC2D2BQ6DHV5 1058 aa25.74■■□□□ 1.71
SHCBP1-203ENST00000564272 PSMD1Q99460 953 aa25.74■■□□□ 1.71
SHCBP1-203ENST00000564272 MYD88Q99836 296 aa25.74■■□□□ 1.71
SHCBP1-203ENST00000564272 POTECB2RU33 542 aa25.73■■□□□ 1.71
SHCBP1-203ENST00000564272 VEGFAP15692 232 aaPredicted RBP25.73■■□□□ 1.71
SHCBP1-203ENST00000564272 RTL5Q5HYW3 569 aaPredicted RBP25.73■■□□□ 1.71
SHCBP1-203ENST00000564272 CHMP4AQ9BY43 222 aa25.73■■□□□ 1.71
SHCBP1-203ENST00000564272 ZNF541Q9H0D2 1346 aa25.72■■□□□ 1.71
SHCBP1-203ENST00000564272 DDNO94850 711 aaPredicted RBP25.72■■□□□ 1.71
SHCBP1-203ENST00000564272 TRIM28Q13263 835 aaKnown RBP25.72■■□□□ 1.71
SHCBP1-203ENST00000564272 WDR63Q8IWG1 891 aa25.72■■□□□ 1.71
SHCBP1-203ENST00000564272 TAF1P21675 1872 aa25.72■■□□□ 1.71
SHCBP1-203ENST00000564272 COL4A5P29400 1685 aa25.71■■□□□ 1.71
SHCBP1-203ENST00000564272 STK31Q9BXU1 1019 aa25.71■■□□□ 1.71
SHCBP1-203ENST00000564272 DDX46Q7L014 1031 aaKnown RBP25.7■■□□□ 1.7
SHCBP1-203ENST00000564272 ATP6V0A2Q9Y487 856 aa25.7■■□□□ 1.7
SHCBP1-203ENST00000564272 DDX58O95786 925 aaKnown RBP25.69■■□□□ 1.7
SHCBP1-203ENST00000564272 SPINK5Q9NQ38 1064 aaPredicted RBP25.69■■□□□ 1.7
SHCBP1-203ENST00000564272 GRAPQ13588 217 aa25.68■■□□□ 1.7
SHCBP1-203ENST00000564272 GRIPAP1Q4V328 841 aa25.68■■□□□ 1.7
SHCBP1-203ENST00000564272 G2E3Q7L622 706 aa25.68■■□□□ 1.7
SHCBP1-203ENST00000564272 GRAPLQ8TC17 118 aaPredicted RBP25.68■■□□□ 1.7
SHCBP1-203ENST00000564272 METTL22Q9BUU2 404 aaPredicted RBP25.68■■□□□ 1.7
SHCBP1-203ENST00000564272 MAP3K2Q9Y2U5 619 aa25.68■■□□□ 1.7
SHCBP1-203ENST00000564272 COL4A1P02462 1669 aa25.68■■□□□ 1.7
SHCBP1-203ENST00000564272 IRS4O14654 1257 aaPredicted RBP25.67■■□□□ 1.7
SHCBP1-203ENST00000564272 FSTL1Q12841 308 aa25.67■■□□□ 1.7
SHCBP1-203ENST00000564272 PI4KAP2A4QPH2 592 aa25.66■■□□□ 1.7
SHCBP1-203ENST00000564272 BBOX1O75936 387 aa25.66■■□□□ 1.7
SHCBP1-203ENST00000564272 EXOSC9Q06265 439 aaKnown RBP25.66■■□□□ 1.7
SHCBP1-203ENST00000564272 KSR2Q6VAB6 950 aa25.66■■□□□ 1.7
SHCBP1-203ENST00000564272 PI4KAP1Q8N8J0 262 aa25.66■■□□□ 1.7
SHCBP1-203ENST00000564272 ZBTB38Q8NAP3 1195 aaPredicted RBP25.66■■□□□ 1.7
SHCBP1-203ENST00000564272 SMC1BQ8NDV3 1235 aa25.66■■□□□ 1.7
SHCBP1-203ENST00000564272 TMX4Q9H1E5 349 aaPredicted RBP25.66■■□□□ 1.7
SHCBP1-203ENST00000564272 FZD9O00144 591 aa25.65■■□□□ 1.7
SHCBP1-203ENST00000564272 SLC4A2P04920 1241 aa25.65■■□□□ 1.7
SHCBP1-203ENST00000564272 SF3B3Q15393 1217 aaKnown RBP25.65■■□□□ 1.7
SHCBP1-203ENST00000564272 CCDC191Q8NCU4 936 aa25.65■■□□□ 1.7
SHCBP1-203ENST00000564272 JARID2Q92833 1246 aaPredicted RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms