RNA–Protein interactions for RNA: ENST00000564257.1

NEIL1-203, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-203ENST00000564257 ANP32CO43423 234 aa28.1■■■□□ 2.09
NEIL1-203ENST00000564257 GNAI1P63096 354 aa28.1■■■□□ 2.09
NEIL1-203ENST00000564257 CRY2Q49AN0 593 aa28.1■■■□□ 2.09
NEIL1-203ENST00000564257 DUSP27Q5VZP5 1158 aa28.1■■■□□ 2.09
NEIL1-203ENST00000564257 IFT57Q9NWB7 429 aa28.1■■■□□ 2.09
NEIL1-203ENST00000564257 DPY19L2Q6NUT2 758 aa28.09■■■□□ 2.09
NEIL1-203ENST00000564257 RBM46Q8TBY0 533 aaKnown RBP28.09■■■□□ 2.09
NEIL1-203ENST00000564257 UTP14AQ9BVJ6 771 aaKnown RBP28.09■■■□□ 2.09
NEIL1-203ENST00000564257 DBF4Q9UBU7 674 aaPredicted RBP28.09■■■□□ 2.09
NEIL1-203ENST00000564257 ZNF853P0CG23 659 aa28.07■■■□□ 2.08
NEIL1-203ENST00000564257 OLFM4Q6UX06 510 aa28.07■■■□□ 2.08
NEIL1-203ENST00000564257 FKBP4Q02790 459 aaKnown RBP eCLIP28.06■■■□□ 2.08
NEIL1-203ENST00000564257 RTKN2Q8IZC4 609 aa28.06■■■□□ 2.08
NEIL1-203ENST00000564257 MRS2Q9HD23 443 aa28.06■■■□□ 2.08
NEIL1-203ENST00000564257 VEGFAP15692 232 aaPredicted RBP28.05■■■□□ 2.08
NEIL1-203ENST00000564257 TCIRG1Q13488 830 aa28.05■■■□□ 2.08
NEIL1-203ENST00000564257 RBM17Q96I25 401 aaKnown RBP28.05■■■□□ 2.08
NEIL1-203ENST00000564257 NLRP3Q96P20 1036 aa28.05■■■□□ 2.08
NEIL1-203ENST00000564257 WDR90Q96KV7 1748 aa28.04■■■□□ 2.08
NEIL1-203ENST00000564257 RNF123Q5XPI4 1314 aa28.04■■■□□ 2.08
NEIL1-203ENST00000564257 HYPKQ9NX55 129 aa28.04■■■□□ 2.08
NEIL1-203ENST00000564257 CEP350Q5VT06 3117 aa28.04■■■□□ 2.08
NEIL1-203ENST00000564257 ELL2O00472 640 aaPredicted RBP28.03■■■□□ 2.08
NEIL1-203ENST00000564257 HOXA10P31260 410 aaPredicted RBP28.03■■■□□ 2.08
NEIL1-203ENST00000564257 NLRP10Q86W26 655 aa28.03■■■□□ 2.08
NEIL1-203ENST00000564257 PLBD2Q8NHP8 589 aa28.03■■■□□ 2.08
NEIL1-203ENST00000564257 ZNF277Q9NRM2 450 aaPredicted RBP28.03■■■□□ 2.08
NEIL1-203ENST00000564257 LAMB2P55268 1798 aa28.03■■■□□ 2.08
NEIL1-203ENST00000564257 ANKRD13DQ6ZTN6 518 aa28.02■■■□□ 2.08
NEIL1-203ENST00000564257 C3orf67Q6ZVT6 689 aa28.02■■■□□ 2.08
NEIL1-203ENST00000564257 TRMT112Q9UI30 125 aaKnown RBP28.02■■■□□ 2.08
NEIL1-203ENST00000564257 FSTL1Q12841 308 aa28.01■■■□□ 2.07
NEIL1-203ENST00000564257 CRAMP1Q96RY5 1269 aa28.01■■■□□ 2.07
NEIL1-203ENST00000564257 APLP1P51693 650 aa28■■■□□ 2.07
NEIL1-203ENST00000564257 TCERG1O14776 1098 aaKnown RBP27.99■■■□□ 2.07
NEIL1-203ENST00000564257 PPEF1O14829 653 aaPredicted RBP27.99■■■□□ 2.07
NEIL1-203ENST00000564257 SLC10A5Q5PT55 438 aa27.99■■■□□ 2.07
NEIL1-203ENST00000564257 CC2D2BQ6DHV5 1058 aa27.99■■■□□ 2.07
NEIL1-203ENST00000564257 SH3TC1Q8TE82 1336 aa27.98■■■□□ 2.07
NEIL1-203ENST00000564257 SYNE4Q8N205 404 aa27.98■■■□□ 2.07
NEIL1-203ENST00000564257 SMC1BQ8NDV3 1235 aa27.98■■■□□ 2.07
NEIL1-203ENST00000564257 ZNF428Q96B54 188 aa27.98■■■□□ 2.07
NEIL1-203ENST00000564257 DDNO94850 711 aaPredicted RBP27.97■■■□□ 2.07
NEIL1-203ENST00000564257 HCLS1P14317 486 aaPredicted RBP27.97■■■□□ 2.07
NEIL1-203ENST00000564257 IARSP41252 1262 aaKnown RBP27.97■■■□□ 2.07
NEIL1-203ENST00000564257 C8orf58Q8NAV2 365 aa27.97■■■□□ 2.07
NEIL1-203ENST00000564257 TMX4Q9H1E5 349 aaPredicted RBP27.97■■■□□ 2.07
NEIL1-203ENST00000564257 GOLGA2Q08379 1002 aa27.96■■■□□ 2.07
NEIL1-203ENST00000564257 PSMD1Q99460 953 aa27.96■■■□□ 2.07
NEIL1-203ENST00000564257 SNED1Q8TER0 1413 aa27.95■■■□□ 2.07
NEIL1-203ENST00000564257 ATP5J2-PTCD1G3V325 749 aa27.95■■■□□ 2.06
NEIL1-203ENST00000564257 CCDC27Q2M243 656 aa27.95■■■□□ 2.06
NEIL1-203ENST00000564257 POTECB2RU33 542 aa27.94■■■□□ 2.06
NEIL1-203ENST00000564257 GRIPAP1Q4V328 841 aa27.94■■■□□ 2.06
NEIL1-203ENST00000564257 RIC3Q7Z5B4 369 aa27.94■■■□□ 2.06
NEIL1-203ENST00000564257 WWC1Q8IX03 1113 aa27.94■■■□□ 2.06
NEIL1-203ENST00000564257 TSR2Q969E8 191 aaKnown RBP27.94■■■□□ 2.06
NEIL1-203ENST00000564257 CHMP4AQ9BY43 222 aa27.94■■■□□ 2.06
NEIL1-203ENST00000564257 DDX60Q8IY21 1712 aaKnown RBP27.94■■■□□ 2.06
NEIL1-203ENST00000564257 ABCC4O15439 1325 aa27.93■■■□□ 2.06
NEIL1-203ENST00000564257 ISCA1Q9BUE6 129 aa27.93■■■□□ 2.06
NEIL1-203ENST00000564257 PHAXQ9H814 394 aaKnown RBP27.93■■■□□ 2.06
NEIL1-203ENST00000564257 CCDC30Q5VVM6 783 aa27.92■■■□□ 2.06
NEIL1-203ENST00000564257 JDP2Q8WYK2 163 aa27.92■■■□□ 2.06
NEIL1-203ENST00000564257 DDX46Q7L014 1031 aaKnown RBP27.91■■■□□ 2.06
NEIL1-203ENST00000564257 ZNF541Q9H0D2 1346 aa27.91■■■□□ 2.06
NEIL1-203ENST00000564257 SCN4AP35499 1836 aa27.9■■■□□ 2.06
NEIL1-203ENST00000564257 SLC51AQ86UW1 340 aa27.9■■■□□ 2.06
NEIL1-203ENST00000564257 TSPYL6Q8N831 410 aa27.9■■■□□ 2.06
NEIL1-203ENST00000564257 FAM89AQ96GI7 184 aa27.9■■■□□ 2.06
NEIL1-203ENST00000564257 IQCA1LA6NCM1 817 aa27.89■■■□□ 2.06
NEIL1-203ENST00000564257 ATP6V0A2Q9Y487 856 aa27.89■■■□□ 2.06
NEIL1-203ENST00000564257 TAF1P21675 1872 aa27.89■■■□□ 2.05
NEIL1-203ENST00000564257 RTL5Q5HYW3 569 aaPredicted RBP27.88■■■□□ 2.05
NEIL1-203ENST00000564257 SALL2Q9Y467 1007 aaPredicted RBP27.88■■■□□ 2.05
NEIL1-203ENST00000564257 FZD9O00144 591 aa27.87■■■□□ 2.05
NEIL1-203ENST00000564257 BBOX1O75936 387 aa27.87■■■□□ 2.05
NEIL1-203ENST00000564257 DDX58O95786 925 aaKnown RBP27.87■■■□□ 2.05
NEIL1-203ENST00000564257 LARGE2Q8N3Y3 721 aa27.87■■■□□ 2.05
NEIL1-203ENST00000564257 IL16Q14005 1332 aa27.87■■■□□ 2.05
NEIL1-203ENST00000564257 GRAPQ13588 217 aa27.86■■■□□ 2.05
NEIL1-203ENST00000564257 NCBP3Q53F19 620 aaKnown RBP27.86■■■□□ 2.05
NEIL1-203ENST00000564257 GRAPLQ8TC17 118 aaPredicted RBP27.86■■■□□ 2.05
NEIL1-203ENST00000564257 L3MBTL3Q96JM7 780 aaPredicted RBP27.86■■■□□ 2.05
NEIL1-203ENST00000564257 MYD88Q99836 296 aa27.86■■■□□ 2.05
NEIL1-203ENST00000564257 STK31Q9BXU1 1019 aa27.86■■■□□ 2.05
NEIL1-203ENST00000564257 TRIM28Q13263 835 aaKnown RBP27.85■■■□□ 2.05
NEIL1-203ENST00000564257 COL4A5P29400 1685 aa27.84■■■□□ 2.05
NEIL1-203ENST00000564257 EIF6P56537 245 aaKnown RBP27.84■■■□□ 2.05
NEIL1-203ENST00000564257 HTRA3P83110 453 aa27.84■■■□□ 2.05
NEIL1-203ENST00000564257 TWISTNBQ3B726 338 aaPredicted RBP27.84■■■□□ 2.05
NEIL1-203ENST00000564257 IRS4O14654 1257 aaPredicted RBP27.83■■■□□ 2.05
NEIL1-203ENST00000564257 PPIP5K2O43314 1243 aa27.83■■■□□ 2.05
NEIL1-203ENST00000564257 DPP8Q6V1X1 898 aaPredicted RBP27.83■■■□□ 2.05
NEIL1-203ENST00000564257 SP8Q8IXZ3 490 aa27.83■■■□□ 2.05
NEIL1-203ENST00000564257 FAM9BQ8IZU0 186 aa27.83■■■□□ 2.05
NEIL1-203ENST00000564257 NIM1KQ8IY84 436 aa27.82■■■□□ 2.04
NEIL1-203ENST00000564257 GPC2Q8N158 579 aa27.82■■■□□ 2.04
NEIL1-203ENST00000564257 SUPT20HQ8NEM7 779 aa27.82■■■□□ 2.04
NEIL1-203ENST00000564257 HACL1Q9UJ83 578 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms