RNA–Protein interactions for RNA: ENST00000563904.1

HERC2P4-201, Transcript of hect domain and RLD 2 pseudogene 4, humanhuman

TSL 5

Gene HERC2P4, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P4-201ENST00000563904 CCDC93Q567U6 631 aa20.54■□□□□ 0.88
HERC2P4-201ENST00000563904 UTP14AQ9BVJ6 771 aaKnown RBP20.54■□□□□ 0.88
HERC2P4-201ENST00000563904 CCDC88AQ3V6T2 1871 aa20.54■□□□□ 0.88
HERC2P4-201ENST00000563904 RPGRQ92834 1020 aaKnown RBP20.53■□□□□ 0.88
HERC2P4-201ENST00000563904 HYPKQ9NX55 129 aa20.53■□□□□ 0.88
HERC2P4-201ENST00000563904 RNF123Q5XPI4 1314 aa20.53■□□□□ 0.88
HERC2P4-201ENST00000563904 ELL2O00472 640 aaPredicted RBP20.52■□□□□ 0.88
HERC2P4-201ENST00000563904 TCIRG1Q13488 830 aa20.52■□□□□ 0.88
HERC2P4-201ENST00000563904 OLFM4Q6UX06 510 aa20.52■□□□□ 0.88
HERC2P4-201ENST00000563904 C3orf67Q6ZVT6 689 aa20.52■□□□□ 0.88
HERC2P4-201ENST00000563904 NLRP10Q86W26 655 aa20.52■□□□□ 0.88
HERC2P4-201ENST00000563904 PLBD2Q8NHP8 589 aa20.52■□□□□ 0.88
HERC2P4-201ENST00000563904 TOMM70O94826 608 aa20.51■□□□□ 0.87
HERC2P4-201ENST00000563904 HOXA10P31260 410 aaPredicted RBP20.51■□□□□ 0.87
HERC2P4-201ENST00000563904 WWC1Q8IX03 1113 aa20.51■□□□□ 0.87
HERC2P4-201ENST00000563904 C8orf58Q8NAV2 365 aa20.51■□□□□ 0.87
HERC2P4-201ENST00000563904 DICER1Q9UPY3 1922 aaKnown RBP20.51■□□□□ 0.87
HERC2P4-201ENST00000563904 GLTPD2A6NH11 291 aa20.5■□□□□ 0.87
HERC2P4-201ENST00000563904 ANKRD13DQ6ZTN6 518 aa20.5■□□□□ 0.87
HERC2P4-201ENST00000563904 PIAS4Q8N2W9 510 aaPredicted RBP20.5■□□□□ 0.87
HERC2P4-201ENST00000563904 TSR2Q969E8 191 aaKnown RBP20.5■□□□□ 0.87
HERC2P4-201ENST00000563904 SNED1Q8TER0 1413 aa20.5■□□□□ 0.87
HERC2P4-201ENST00000563904 FKBP4Q02790 459 aaKnown RBP eCLIP20.49■□□□□ 0.87
HERC2P4-201ENST00000563904 SLC10A5Q5PT55 438 aa20.49■□□□□ 0.87
HERC2P4-201ENST00000563904 RRAGCQ9HB90 399 aa20.49■□□□□ 0.87
HERC2P4-201ENST00000563904 NCBP3Q53F19 620 aaKnown RBP20.48■□□□□ 0.87
HERC2P4-201ENST00000563904 RTKN2Q8IZC4 609 aa20.48■□□□□ 0.87
HERC2P4-201ENST00000563904 RBM17Q96I25 401 aaKnown RBP20.48■□□□□ 0.87
HERC2P4-201ENST00000563904 NLRP3Q96P20 1036 aa20.48■□□□□ 0.87
HERC2P4-201ENST00000563904 TRMT112Q9UI30 125 aaKnown RBP20.48■□□□□ 0.87
HERC2P4-201ENST00000563904 SH3TC1Q8TE82 1336 aa20.48■□□□□ 0.87
HERC2P4-201ENST00000563904 LAMB2P55268 1798 aa20.47■□□□□ 0.87
HERC2P4-201ENST00000563904 HSPA6P17066 643 aa20.47■□□□□ 0.87
HERC2P4-201ENST00000563904 C16orf71Q8IYS4 520 aaPredicted RBP20.47■□□□□ 0.87
HERC2P4-201ENST00000563904 TSPYL6Q8N831 410 aa20.47■□□□□ 0.87
HERC2P4-201ENST00000563904 CRAMP1Q96RY5 1269 aa20.47■□□□□ 0.87
HERC2P4-201ENST00000563904 IL16Q14005 1332 aa20.47■□□□□ 0.87
HERC2P4-201ENST00000563904 GOLGA2Q08379 1002 aa20.46■□□□□ 0.87
HERC2P4-201ENST00000563904 SYNE4Q8N205 404 aa20.46■□□□□ 0.87
HERC2P4-201ENST00000563904 RBM46Q8TBY0 533 aaKnown RBP20.46■□□□□ 0.87
HERC2P4-201ENST00000563904 ISCA1Q9BUE6 129 aa20.46■□□□□ 0.87
HERC2P4-201ENST00000563904 PHAXQ9H814 394 aaKnown RBP20.46■□□□□ 0.87
HERC2P4-201ENST00000563904 ZNF277Q9NRM2 450 aaPredicted RBP20.46■□□□□ 0.87
HERC2P4-201ENST00000563904 WDR90Q96KV7 1748 aa20.46■□□□□ 0.87
HERC2P4-201ENST00000563904 ATP5J2-PTCD1G3V325 749 aa20.45■□□□□ 0.86
HERC2P4-201ENST00000563904 PPEF1O14829 653 aaPredicted RBP20.45■□□□□ 0.86
HERC2P4-201ENST00000563904 HCLS1P14317 486 aaPredicted RBP20.45■□□□□ 0.86
HERC2P4-201ENST00000563904 CCDC30Q5VVM6 783 aa20.45■□□□□ 0.86
HERC2P4-201ENST00000563904 DPY19L2Q6NUT2 758 aa20.45■□□□□ 0.86
HERC2P4-201ENST00000563904 ZNF428Q96B54 188 aa20.45■□□□□ 0.86
HERC2P4-201ENST00000563904 CC2D2BQ6DHV5 1058 aa20.44■□□□□ 0.86
HERC2P4-201ENST00000563904 SLC51AQ86UW1 340 aa20.44■□□□□ 0.86
HERC2P4-201ENST00000563904 CHMP4AQ9BY43 222 aa20.44■□□□□ 0.86
HERC2P4-201ENST00000563904 ABCC4O15439 1325 aa20.44■□□□□ 0.86
HERC2P4-201ENST00000563904 DDX60Q8IY21 1712 aaKnown RBP20.44■□□□□ 0.86
HERC2P4-201ENST00000563904 VEGFAP15692 232 aaPredicted RBP20.43■□□□□ 0.86
HERC2P4-201ENST00000563904 RIC3Q7Z5B4 369 aa20.43■□□□□ 0.86
HERC2P4-201ENST00000563904 PSMD1Q99460 953 aa20.43■□□□□ 0.86
HERC2P4-201ENST00000563904 FAM9BQ8IZU0 186 aa20.42■□□□□ 0.86
HERC2P4-201ENST00000563904 SALL2Q9Y467 1007 aaPredicted RBP20.42■□□□□ 0.86
HERC2P4-201ENST00000563904 FANCIQ9NVI1 1328 aa20.42■□□□□ 0.86
HERC2P4-201ENST00000563904 TCERG1O14776 1098 aaKnown RBP20.41■□□□□ 0.86
HERC2P4-201ENST00000563904 IARSP41252 1262 aaKnown RBP20.41■□□□□ 0.86
HERC2P4-201ENST00000563904 TRIM28Q13263 835 aaKnown RBP20.41■□□□□ 0.86
HERC2P4-201ENST00000563904 TWISTNBQ3B726 338 aaPredicted RBP20.41■□□□□ 0.86
HERC2P4-201ENST00000563904 POTECB2RU33 542 aa20.4■□□□□ 0.86
HERC2P4-201ENST00000563904 DDNO94850 711 aaPredicted RBP20.4■□□□□ 0.86
HERC2P4-201ENST00000563904 GRIPAP1Q4V328 841 aa20.4■□□□□ 0.86
HERC2P4-201ENST00000563904 FAM89AQ96GI7 184 aa20.4■□□□□ 0.86
HERC2P4-201ENST00000563904 ATP6V0A2Q9Y487 856 aa20.4■□□□□ 0.86
HERC2P4-201ENST00000563904 COL4A5P29400 1685 aa20.39■□□□□ 0.86
HERC2P4-201ENST00000563904 ZNF541Q9H0D2 1346 aa20.39■□□□□ 0.85
HERC2P4-201ENST00000563904 DDX58O95786 925 aaKnown RBP20.39■□□□□ 0.85
HERC2P4-201ENST00000563904 FSTL1Q12841 308 aa20.39■□□□□ 0.85
HERC2P4-201ENST00000563904 WDR63Q8IWG1 891 aa20.39■□□□□ 0.85
HERC2P4-201ENST00000563904 MYD88Q99836 296 aa20.39■□□□□ 0.85
HERC2P4-201ENST00000563904 STK31Q9BXU1 1019 aa20.39■□□□□ 0.85
HERC2P4-201ENST00000563904 DDX46Q7L014 1031 aaKnown RBP20.38■□□□□ 0.85
HERC2P4-201ENST00000563904 SMC1BQ8NDV3 1235 aa20.38■□□□□ 0.85
HERC2P4-201ENST00000563904 GRAPQ13588 217 aa20.37■□□□□ 0.85
HERC2P4-201ENST00000563904 RTL5Q5HYW3 569 aaPredicted RBP20.37■□□□□ 0.85
HERC2P4-201ENST00000563904 GRAPLQ8TC17 118 aaPredicted RBP20.37■□□□□ 0.85
HERC2P4-201ENST00000563904 TMX4Q9H1E5 349 aaPredicted RBP20.37■□□□□ 0.85
HERC2P4-201ENST00000563904 BBOX1O75936 387 aa20.36■□□□□ 0.85
HERC2P4-201ENST00000563904 APLP1P51693 650 aa20.36■□□□□ 0.85
HERC2P4-201ENST00000563904 ZBTB38Q8NAP3 1195 aaPredicted RBP20.36■□□□□ 0.85
HERC2P4-201ENST00000563904 METTL22Q9BUU2 404 aaPredicted RBP20.36■□□□□ 0.85
HERC2P4-201ENST00000563904 MAP3K2Q9Y2U5 619 aa20.36■□□□□ 0.85
HERC2P4-201ENST00000563904 LRRC37AA6NMS7 1700 aa20.36■□□□□ 0.85
HERC2P4-201ENST00000563904 FZD9O00144 591 aa20.35■□□□□ 0.85
HERC2P4-201ENST00000563904 IRS4O14654 1257 aaPredicted RBP20.35■□□□□ 0.85
HERC2P4-201ENST00000563904 SF3B3Q15393 1217 aaKnown RBP20.35■□□□□ 0.85
HERC2P4-201ENST00000563904 CCDC191Q8NCU4 936 aa20.35■□□□□ 0.85
HERC2P4-201ENST00000563904 JDP2Q8WYK2 163 aa20.35■□□□□ 0.85
HERC2P4-201ENST00000563904 L3MBTL3Q96JM7 780 aaPredicted RBP20.35■□□□□ 0.85
HERC2P4-201ENST00000563904 KSR2Q6VAB6 950 aa20.34■□□□□ 0.85
HERC2P4-201ENST00000563904 SP8Q8IXZ3 490 aa20.34■□□□□ 0.85
HERC2P4-201ENST00000563904 LARGE2Q8N3Y3 721 aa20.34■□□□□ 0.85
HERC2P4-201ENST00000563904 CWC25Q9NXE8 425 aaPredicted RBP20.34■□□□□ 0.85
HERC2P4-201ENST00000563904 COL4A1P02462 1669 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms