RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 CCDC24Q8N4L8 307 aa11.31□□□□□ -0.6
NSMCE1-206ENST00000563900 PI4KAP1Q8N8J0 262 aa11.31□□□□□ -0.6
NSMCE1-206ENST00000563900 METTL22Q9BUU2 404 aaPredicted RBP11.31□□□□□ -0.6
NSMCE1-206ENST00000563900 PDZRN3Q9UPQ7 1066 aa11.31□□□□□ -0.6
NSMCE1-206ENST00000563900 ARFGEF1Q9Y6D6 1849 aa11.3□□□□□ -0.6
NSMCE1-206ENST00000563900 DDX58O95786 925 aaKnown RBP11.3□□□□□ -0.6
NSMCE1-206ENST00000563900 SRGNP10124 158 aa11.3□□□□□ -0.6
NSMCE1-206ENST00000563900 PDE6BP35913 854 aa11.3□□□□□ -0.6
NSMCE1-206ENST00000563900 CRY2Q49AN0 593 aa11.3□□□□□ -0.6
NSMCE1-206ENST00000563900 SLC10A5Q5PT55 438 aa11.3□□□□□ -0.6
NSMCE1-206ENST00000563900 PPP1R42Q7Z4L9 355 aa11.3□□□□□ -0.6
NSMCE1-206ENST00000563900 RIC3Q7Z5B4 369 aa11.3□□□□□ -0.6
NSMCE1-206ENST00000563900 NUTM1Q86Y26 1132 aa11.3□□□□□ -0.6
NSMCE1-206ENST00000563900 FAM177BA6PVY3 158 aa11.29□□□□□ -0.6
NSMCE1-206ENST00000563900 IGKV5-2P06315 115 aa11.29□□□□□ -0.6
NSMCE1-206ENST00000563900 ALDH1L2Q3SY69 923 aa11.29□□□□□ -0.6
NSMCE1-206ENST00000563900 ERFEQ4G0M1 354 aa11.29□□□□□ -0.6
NSMCE1-206ENST00000563900 MRPL50Q8N5N7 158 aaKnown RBP11.29□□□□□ -0.6
NSMCE1-206ENST00000563900 SSH1Q8WYL5 1049 aa11.29□□□□□ -0.6
NSMCE1-206ENST00000563900 UTP14AQ9BVJ6 771 aaKnown RBP11.29□□□□□ -0.6
NSMCE1-206ENST00000563900 MAP3K2Q9Y2U5 619 aa11.29□□□□□ -0.6
NSMCE1-206ENST00000563900 LAMB2P55268 1798 aa11.28□□□□□ -0.6
NSMCE1-206ENST00000563900 ATP5J2-PTCD1G3V325 749 aa11.28□□□□□ -0.6
NSMCE1-206ENST00000563900 BRPF1P55201 1214 aaPredicted RBP11.28□□□□□ -0.6
NSMCE1-206ENST00000563900 C2CD5Q86YS7 1000 aa11.28□□□□□ -0.6
NSMCE1-206ENST00000563900 CCDC191Q8NCU4 936 aa11.28□□□□□ -0.6
NSMCE1-206ENST00000563900 MYD88Q99836 296 aa11.28□□□□□ -0.6
NSMCE1-206ENST00000563900 PIM2Q9P1W9 311 aa11.28□□□□□ -0.6
NSMCE1-206ENST00000563900 DDX60Q8IY21 1712 aaKnown RBP11.28□□□□□ -0.6
NSMCE1-206ENST00000563900 SH3TC1Q8TE82 1336 aa11.28□□□□□ -0.6
NSMCE1-206ENST00000563900 H0YIN7 160 aa11.27□□□□□ -0.61
NSMCE1-206ENST00000563900 FKBP5Q13451 457 aaPredicted RBP11.27□□□□□ -0.61
NSMCE1-206ENST00000563900 GPR162Q16538 588 aa11.27□□□□□ -0.61
NSMCE1-206ENST00000563900 STYK1Q6J9G0 422 aa11.27□□□□□ -0.61
NSMCE1-206ENST00000563900 C3orf67Q6ZVT6 689 aa11.27□□□□□ -0.61
NSMCE1-206ENST00000563900 SYNE4Q8N205 404 aa11.27□□□□□ -0.61
NSMCE1-206ENST00000563900 DNAAF4Q8WXU2 420 aa11.27□□□□□ -0.61
NSMCE1-206ENST00000563900 NEURL1BA8MQ27 555 aa11.26□□□□□ -0.61
NSMCE1-206ENST00000563900 NPHP1O15259 732 aa11.26□□□□□ -0.61
NSMCE1-206ENST00000563900 GRIN3BO60391 1043 aa11.26□□□□□ -0.61
NSMCE1-206ENST00000563900 NPR1P16066 1061 aa11.26□□□□□ -0.61
NSMCE1-206ENST00000563900 HOXA10P31260 410 aaPredicted RBP11.26□□□□□ -0.61
NSMCE1-206ENST00000563900 RARSP54136 660 aaKnown RBP11.26□□□□□ -0.61
NSMCE1-206ENST00000563900 ZBTB38Q8NAP3 1195 aaPredicted RBP11.26□□□□□ -0.61
NSMCE1-206ENST00000563900 MASTLQ96GX5 879 aa11.26□□□□□ -0.61
NSMCE1-206ENST00000563900 TRMT112Q9UI30 125 aaKnown RBP11.26□□□□□ -0.61
NSMCE1-206ENST00000563900 WWC3Q9ULE0 1092 aa11.26□□□□□ -0.61
NSMCE1-206ENST00000563900 SNED1Q8TER0 1413 aa11.26□□□□□ -0.61
NSMCE1-206ENST00000563900 SLX4Q8IY92 1834 aa11.25□□□□□ -0.61
NSMCE1-206ENST00000563900 F6X3S4 739 aa11.25□□□□□ -0.61
NSMCE1-206ENST00000563900 PCCAP05165 728 aaPredicted RBP11.25□□□□□ -0.61
NSMCE1-206ENST00000563900 GTF2E1P29083 439 aaPredicted RBP11.25□□□□□ -0.61
NSMCE1-206ENST00000563900 DALRD3Q5D0E6 543 aaKnown RBP11.25□□□□□ -0.61
NSMCE1-206ENST00000563900 BEND3Q5T5X7 828 aa11.25□□□□□ -0.61
NSMCE1-206ENST00000563900 TTLL6Q8N841 843 aa11.25□□□□□ -0.61
NSMCE1-206ENST00000563900 LINS1Q8NG48 757 aa11.25□□□□□ -0.61
NSMCE1-206ENST00000563900 C7orf43Q8WVR3 580 aa11.25□□□□□ -0.61
NSMCE1-206ENST00000563900 FAM89AQ96GI7 184 aa11.25□□□□□ -0.61
NSMCE1-206ENST00000563900 BCL2L13Q9BXK5 485 aa11.25□□□□□ -0.61
NSMCE1-206ENST00000563900 CWC25Q9NXE8 425 aaPredicted RBP11.25□□□□□ -0.61
NSMCE1-206ENST00000563900 BCS1LQ9Y276 419 aa11.25□□□□□ -0.61
NSMCE1-206ENST00000563900 PTPRCP08575 1304 aa11.25□□□□□ -0.61
NSMCE1-206ENST00000563900 DCAF8L1A6NGE4 600 aa11.24□□□□□ -0.61
NSMCE1-206ENST00000563900 HCLS1P14317 486 aaPredicted RBP11.24□□□□□ -0.61
NSMCE1-206ENST00000563900 CASP7P55210 303 aa11.24□□□□□ -0.61
NSMCE1-206ENST00000563900 NEXNQ0ZGT2 675 aa11.24□□□□□ -0.61
NSMCE1-206ENST00000563900 CWF19L2Q2TBE0 894 aaKnown RBP11.24□□□□□ -0.61
NSMCE1-206ENST00000563900 PELP1Q8IZL8 1130 aaKnown RBP11.24□□□□□ -0.61
NSMCE1-206ENST00000563900 CNKSR1Q969H4 720 aa11.24□□□□□ -0.61
NSMCE1-206ENST00000563900 SMC4Q9NTJ3 1288 aa11.24□□□□□ -0.61
NSMCE1-206ENST00000563900 CHD4Q14839 1912 aa11.24□□□□□ -0.61
NSMCE1-206ENST00000563900 CDHR2Q9BYE9 1310 aa11.24□□□□□ -0.61
NSMCE1-206ENST00000563900 H7C1W4 665 aa11.23□□□□□ -0.61
NSMCE1-206ENST00000563900 GCKRQ14397 625 aa11.23□□□□□ -0.61
NSMCE1-206ENST00000563900 SF3B3Q15393 1217 aaKnown RBP11.23□□□□□ -0.61
NSMCE1-206ENST00000563900 PRPF40BQ6NWY9 871 aaKnown RBP11.23□□□□□ -0.61
NSMCE1-206ENST00000563900 ZNF622Q969S3 477 aaKnown RBP eCLIP11.23□□□□□ -0.61
NSMCE1-206ENST00000563900 NLRP3Q96P20 1036 aa11.23□□□□□ -0.61
NSMCE1-206ENST00000563900 CRAMP1Q96RY5 1269 aa11.23□□□□□ -0.61
NSMCE1-206ENST00000563900 IRS4O14654 1257 aaPredicted RBP11.22□□□□□ -0.61
NSMCE1-206ENST00000563900 COL4A1P02462 1669 aa11.22□□□□□ -0.61
NSMCE1-206ENST00000563900 CACNA1SQ13698 1873 aa11.22□□□□□ -0.61
NSMCE1-206ENST00000563900 FER1L6Q2WGJ9 1857 aa11.22□□□□□ -0.61
NSMCE1-206ENST00000563900 ABCC4O15439 1325 aa11.21□□□□□ -0.61
NSMCE1-206ENST00000563900 ALDH1L1O75891 902 aa11.21□□□□□ -0.61
NSMCE1-206ENST00000563900 RTL5Q5HYW3 569 aaPredicted RBP11.21□□□□□ -0.61
NSMCE1-206ENST00000563900 PLA2G12BQ9BX93 195 aa11.21□□□□□ -0.61
NSMCE1-206ENST00000563900 UTYO14607 1347 aa11.2□□□□□ -0.62
NSMCE1-206ENST00000563900 KIF16BQ96L93 1317 aa11.2□□□□□ -0.62
NSMCE1-206ENST00000563900 LTBP3Q9NS15 1303 aa11.2□□□□□ -0.62
NSMCE1-206ENST00000563900 MYH3P11055 1940 aa11.2□□□□□ -0.62
NSMCE1-206ENST00000563900 NFKBIEO00221 500 aa11.2□□□□□ -0.62
NSMCE1-206ENST00000563900 PDE8AO60658 829 aa11.2□□□□□ -0.62
NSMCE1-206ENST00000563900 ALDH1B1P30837 517 aa11.2□□□□□ -0.62
NSMCE1-206ENST00000563900 ARHGAP45Q92619 1136 aa11.2□□□□□ -0.62
NSMCE1-206ENST00000563900 JARID2Q92833 1246 aaPredicted RBP11.2□□□□□ -0.62
NSMCE1-206ENST00000563900 RPGRQ92834 1020 aaKnown RBP11.2□□□□□ -0.62
NSMCE1-206ENST00000563900 RBM17Q96I25 401 aaKnown RBP11.2□□□□□ -0.62
NSMCE1-206ENST00000563900 SRCIN1Q9C0H9 1055 aa11.2□□□□□ -0.62
NSMCE1-206ENST00000563900 NOB1Q9ULX3 412 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms