RNA–Protein interactions for RNA: ENST00000563835.1

PTPN9-203, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-203ENST00000563835 GNAI1P63096 354 aa11.99□□□□□ -0.49
PTPN9-203ENST00000563835 CRY2Q49AN0 593 aa11.99□□□□□ -0.49
PTPN9-203ENST00000563835 C8orf58Q8NAV2 365 aa11.99□□□□□ -0.49
PTPN9-203ENST00000563835 C7orf43Q8WVR3 580 aa11.99□□□□□ -0.49
PTPN9-203ENST00000563835 TAOK3Q9H2K8 898 aa11.99□□□□□ -0.49
PTPN9-203ENST00000563835 COL4A5P29400 1685 aa11.99□□□□□ -0.49
PTPN9-203ENST00000563835 LTBP3Q9NS15 1303 aa11.98□□□□□ -0.49
PTPN9-203ENST00000563835 SYNE4Q8N205 404 aa11.98□□□□□ -0.49
PTPN9-203ENST00000563835 TSPYL6Q8N831 410 aa11.98□□□□□ -0.49
PTPN9-203ENST00000563835 LRRC37AA6NMS7 1700 aa11.97□□□□□ -0.49
PTPN9-203ENST00000563835 KDM2BQ8NHM5 1336 aa11.97□□□□□ -0.49
PTPN9-203ENST00000563835 ZC3H4Q9UPT8 1303 aaKnown RBP11.97□□□□□ -0.49
PTPN9-203ENST00000563835 CALD1Q05682 793 aaKnown RBP11.97□□□□□ -0.49
PTPN9-203ENST00000563835 PARP10Q53GL7 1025 aa11.97□□□□□ -0.49
PTPN9-203ENST00000563835 CCDC93Q567U6 631 aa11.97□□□□□ -0.49
PTPN9-203ENST00000563835 PPP1R42Q7Z4L9 355 aa11.97□□□□□ -0.49
PTPN9-203ENST00000563835 NLRP10Q86W26 655 aa11.97□□□□□ -0.49
PTPN9-203ENST00000563835 WWC1Q8IX03 1113 aa11.97□□□□□ -0.49
PTPN9-203ENST00000563835 UTP14AQ9BVJ6 771 aaKnown RBP11.97□□□□□ -0.49
PTPN9-203ENST00000563835 DBF4Q9UBU7 674 aaPredicted RBP11.97□□□□□ -0.49
PTPN9-203ENST00000563835 TCIRG1Q13488 830 aa11.96□□□□□ -0.49
PTPN9-203ENST00000563835 RPGRQ92834 1020 aaKnown RBP11.96□□□□□ -0.49
PTPN9-203ENST00000563835 PHAXQ9H814 394 aaKnown RBP11.96□□□□□ -0.49
PTPN9-203ENST00000563835 RRAGCQ9HB90 399 aa11.96□□□□□ -0.49
PTPN9-203ENST00000563835 SALL2Q9Y467 1007 aaPredicted RBP11.96□□□□□ -0.49
PTPN9-203ENST00000563835 ATP5J2-PTCD1G3V325 749 aa11.95□□□□□ -0.5
PTPN9-203ENST00000563835 TCERG1O14776 1098 aaKnown RBP11.95□□□□□ -0.5
PTPN9-203ENST00000563835 HCLS1P14317 486 aaPredicted RBP11.95□□□□□ -0.5
PTPN9-203ENST00000563835 CCDC27Q2M243 656 aa11.95□□□□□ -0.5
PTPN9-203ENST00000563835 HSP90AB3PQ58FF7 597 aa11.95□□□□□ -0.5
PTPN9-203ENST00000563835 SOGA3Q5TF21 947 aa11.95□□□□□ -0.5
PTPN9-203ENST00000563835 PLBD2Q8NHP8 589 aa11.95□□□□□ -0.5
PTPN9-203ENST00000563835 ZNF277Q9NRM2 450 aaPredicted RBP11.95□□□□□ -0.5
PTPN9-203ENST00000563835 SPEF2Q9C093 1822 aa11.95□□□□□ -0.5
PTPN9-203ENST00000563835 ABCC4O15439 1325 aa11.94□□□□□ -0.5
PTPN9-203ENST00000563835 ZNF541Q9H0D2 1346 aa11.94□□□□□ -0.5
PTPN9-203ENST00000563835 DUOX1Q9NRD9 1551 aa11.94□□□□□ -0.5
PTPN9-203ENST00000563835 GLTPD2A6NH11 291 aa11.94□□□□□ -0.5
PTPN9-203ENST00000563835 PPEF1O14829 653 aaPredicted RBP11.94□□□□□ -0.5
PTPN9-203ENST00000563835 HOXA10P31260 410 aaPredicted RBP11.94□□□□□ -0.5
PTPN9-203ENST00000563835 FKBP4Q02790 459 aaKnown RBP eCLIP11.94□□□□□ -0.5
PTPN9-203ENST00000563835 ANKRD13DQ6ZTN6 518 aa11.94□□□□□ -0.5
PTPN9-203ENST00000563835 FAM9BQ8IZU0 186 aa11.94□□□□□ -0.5
PTPN9-203ENST00000563835 ISCA1Q9BUE6 129 aa11.94□□□□□ -0.5
PTPN9-203ENST00000563835 HYPKQ9NX55 129 aa11.94□□□□□ -0.5
PTPN9-203ENST00000563835 TRMT112Q9UI30 125 aaKnown RBP11.94□□□□□ -0.5
PTPN9-203ENST00000563835 RNF123Q5XPI4 1314 aa11.93□□□□□ -0.5
PTPN9-203ENST00000563835 SH3TC1Q8TE82 1336 aa11.93□□□□□ -0.5
PTPN9-203ENST00000563835 FANCIQ9NVI1 1328 aa11.93□□□□□ -0.5
PTPN9-203ENST00000563835 TOMM70O94826 608 aa11.93□□□□□ -0.5
PTPN9-203ENST00000563835 HSPA6P17066 643 aa11.93□□□□□ -0.5
PTPN9-203ENST00000563835 ALDH1B1P30837 517 aa11.93□□□□□ -0.5
PTPN9-203ENST00000563835 RTL5Q5HYW3 569 aaPredicted RBP11.93□□□□□ -0.5
PTPN9-203ENST00000563835 LTBP1Q14766 1721 aa11.93□□□□□ -0.5
PTPN9-203ENST00000563835 MYH3P11055 1940 aa11.92□□□□□ -0.5
PTPN9-203ENST00000563835 POTECB2RU33 542 aa11.92□□□□□ -0.5
PTPN9-203ENST00000563835 GOLGA2Q08379 1002 aa11.92□□□□□ -0.5
PTPN9-203ENST00000563835 SLC10A5Q5PT55 438 aa11.92□□□□□ -0.5
PTPN9-203ENST00000563835 FAM89AQ96GI7 184 aa11.92□□□□□ -0.5
PTPN9-203ENST00000563835 RBM17Q96I25 401 aaKnown RBP11.92□□□□□ -0.5
PTPN9-203ENST00000563835 NLRP3Q96P20 1036 aa11.92□□□□□ -0.5
PTPN9-203ENST00000563835 CRAMP1Q96RY5 1269 aa11.92□□□□□ -0.5
PTPN9-203ENST00000563835 SCN4AP35499 1836 aa11.92□□□□□ -0.5
PTPN9-203ENST00000563835 IL16Q14005 1332 aa11.91□□□□□ -0.5
PTPN9-203ENST00000563835 DDNO94850 711 aaPredicted RBP11.91□□□□□ -0.5
PTPN9-203ENST00000563835 IARSP41252 1262 aaKnown RBP11.91□□□□□ -0.5
PTPN9-203ENST00000563835 TWISTNBQ3B726 338 aaPredicted RBP11.91□□□□□ -0.5
PTPN9-203ENST00000563835 RIC3Q7Z5B4 369 aa11.91□□□□□ -0.5
PTPN9-203ENST00000563835 C16orf71Q8IYS4 520 aaPredicted RBP11.91□□□□□ -0.5
PTPN9-203ENST00000563835 RTKN2Q8IZC4 609 aa11.91□□□□□ -0.5
PTPN9-203ENST00000563835 RBM46Q8TBY0 533 aaKnown RBP11.91□□□□□ -0.5
PTPN9-203ENST00000563835 MYD88Q99836 296 aa11.91□□□□□ -0.5
PTPN9-203ENST00000563835 SPINK5Q9NQ38 1064 aaPredicted RBP11.91□□□□□ -0.5
PTPN9-203ENST00000563835 CACNA1FO60840 1977 aa11.9□□□□□ -0.5
PTPN9-203ENST00000563835 ADAMTSL1Q8N6G6 1762 aa11.9□□□□□ -0.5
PTPN9-203ENST00000563835 CCDC30Q5VVM6 783 aa11.9□□□□□ -0.5
PTPN9-203ENST00000563835 G2E3Q7L622 706 aa11.9□□□□□ -0.5
PTPN9-203ENST00000563835 PSMD1Q99460 953 aa11.9□□□□□ -0.5
PTPN9-203ENST00000563835 JARID2Q92833 1246 aaPredicted RBP11.89□□□□□ -0.51
PTPN9-203ENST00000563835 IRS4O14654 1257 aaPredicted RBP11.88□□□□□ -0.51
PTPN9-203ENST00000563835 POTEIP0CG38 1075 aa11.88□□□□□ -0.51
PTPN9-203ENST00000563835 POTEJP0CG39 1038 aa11.88□□□□□ -0.51
PTPN9-203ENST00000563835 VEGFAP15692 232 aaPredicted RBP11.88□□□□□ -0.51
PTPN9-203ENST00000563835 HTRA3P83110 453 aa11.88□□□□□ -0.51
PTPN9-203ENST00000563835 GRAPQ13588 217 aa11.88□□□□□ -0.51
PTPN9-203ENST00000563835 NCBP3Q53F19 620 aaKnown RBP11.88□□□□□ -0.51
PTPN9-203ENST00000563835 DPY19L2Q6NUT2 758 aa11.88□□□□□ -0.51
PTPN9-203ENST00000563835 GRAPLQ8TC17 118 aaPredicted RBP11.88□□□□□ -0.51
PTPN9-203ENST00000563835 MAP3K2Q9Y2U5 619 aa11.88□□□□□ -0.51
PTPN9-203ENST00000563835 ATP6V0A2Q9Y487 856 aa11.88□□□□□ -0.51
PTPN9-203ENST00000563835 FZD9O00144 591 aa11.87□□□□□ -0.51
PTPN9-203ENST00000563835 EXOSC9Q06265 439 aaKnown RBP11.87□□□□□ -0.51
PTPN9-203ENST00000563835 CC2D2BQ6DHV5 1058 aa11.87□□□□□ -0.51
PTPN9-203ENST00000563835 DDX46Q7L014 1031 aaKnown RBP11.87□□□□□ -0.51
PTPN9-203ENST00000563835 WDR63Q8IWG1 891 aa11.87□□□□□ -0.51
PTPN9-203ENST00000563835 CELF1Q92879 486 aaKnown RBP11.87□□□□□ -0.51
PTPN9-203ENST00000563835 STK31Q9BXU1 1019 aa11.87□□□□□ -0.51
PTPN9-203ENST00000563835 PI4KAP2A4QPH2 592 aa11.86□□□□□ -0.51
PTPN9-203ENST00000563835 DDX58O95786 925 aaKnown RBP11.86□□□□□ -0.51
PTPN9-203ENST00000563835 IGKV5-2P06315 115 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms