RNA–Protein interactions for RNA: ENST00000563616.1

SLX1A-203, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX1A, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-203ENST00000563616 MCOLN1Q9GZU1 580 aa15.79■□□□□ 0.12
SLX1A-203ENST00000563616 ABCC12Q96J65 1359 aa15.78■□□□□ 0.12
SLX1A-203ENST00000563616 NBPF26B4DH59 902 aa15.78■□□□□ 0.12
SLX1A-203ENST00000563616 SNRPA1P09661 255 aaKnown RBP15.78■□□□□ 0.12
SLX1A-203ENST00000563616 GTF2E1P29083 439 aaPredicted RBP15.78■□□□□ 0.12
SLX1A-203ENST00000563616 CRY2Q49AN0 593 aa15.78■□□□□ 0.12
SLX1A-203ENST00000563616 CC2D2BQ6DHV5 1058 aa15.78■□□□□ 0.12
SLX1A-203ENST00000563616 NBPF10Q6P3W6 841 aaKnown RBP15.78■□□□□ 0.12
SLX1A-203ENST00000563616 USP50Q70EL3 339 aaPredicted RBP15.78■□□□□ 0.12
SLX1A-203ENST00000563616 NBPF15Q8N660 670 aa15.78■□□□□ 0.12
SLX1A-203ENST00000563616 CA12O43570 354 aa15.77■□□□□ 0.12
SLX1A-203ENST00000563616 LARGE2Q8N3Y3 721 aa15.77■□□□□ 0.12
SLX1A-203ENST00000563616 HLFQ16534 295 aa15.76■□□□□ 0.11
SLX1A-203ENST00000563616 CC2D1BQ5T0F9 858 aaKnown RBP15.76■□□□□ 0.11
SLX1A-203ENST00000563616 SAPCD2Q86UD0 394 aa15.76■□□□□ 0.11
SLX1A-203ENST00000563616 NUTM1Q86Y26 1132 aa15.75■□□□□ 0.11
SLX1A-203ENST00000563616 PHACTR3Q96KR7 559 aa15.75■□□□□ 0.11
SLX1A-203ENST00000563616 NUP98P52948 1817 aa15.74■□□□□ 0.11
SLX1A-203ENST00000563616 CELF2O95319 508 aaKnown RBP15.74■□□□□ 0.11
SLX1A-203ENST00000563616 BRPF1P55201 1214 aaPredicted RBP15.74■□□□□ 0.11
SLX1A-203ENST00000563616 DGKZQ13574 1117 aa15.74■□□□□ 0.11
SLX1A-203ENST00000563616 GRIPAP1Q4V328 841 aa15.74■□□□□ 0.11
SLX1A-203ENST00000563616 SLC51AQ86UW1 340 aa15.74■□□□□ 0.11
SLX1A-203ENST00000563616 ADARB2Q9NS39 739 aaKnown RBP15.74■□□□□ 0.11
SLX1A-203ENST00000563616 HOXA10P31260 410 aaPredicted RBP15.73■□□□□ 0.11
SLX1A-203ENST00000563616 NIM1KQ8IY84 436 aa15.73■□□□□ 0.11
SLX1A-203ENST00000563616 RPGRQ92834 1020 aaKnown RBP15.73■□□□□ 0.11
SLX1A-203ENST00000563616 HHIPL1Q96JK4 782 aa15.73■□□□□ 0.11
SLX1A-203ENST00000563616 NYXQ9GZU5 481 aa15.73■□□□□ 0.11
SLX1A-203ENST00000563616 GPRC5DQ9NZD1 345 aa15.73■□□□□ 0.11
SLX1A-203ENST00000563616 CLSPNQ9HAW4 1339 aa15.72■□□□□ 0.11
SLX1A-203ENST00000563616 RIC1Q4ADV7 1423 aa15.72■□□□□ 0.11
SLX1A-203ENST00000563616 PER1O15534 1290 aaPredicted RBP15.72■□□□□ 0.11
SLX1A-203ENST00000563616 PRKAR2BP31323 418 aa15.72■□□□□ 0.11
SLX1A-203ENST00000563616 GLIS2Q9BZE0 524 aaPredicted RBP15.72■□□□□ 0.11
SLX1A-203ENST00000563616 LAMB4A4D0S4 1761 aa15.72■□□□□ 0.11
SLX1A-203ENST00000563616 KIF7Q2M1P5 1343 aa15.71■□□□□ 0.11
SLX1A-203ENST00000563616 TCERG1O14776 1098 aaKnown RBP15.71■□□□□ 0.11
SLX1A-203ENST00000563616 PPEF1O14829 653 aaPredicted RBP15.71■□□□□ 0.11
SLX1A-203ENST00000563616 PPIP5K2O43314 1243 aa15.71■□□□□ 0.11
SLX1A-203ENST00000563616 CIAPIN1Q6FI81 312 aa15.71■□□□□ 0.11
SLX1A-203ENST00000563616 MCM10Q7L590 875 aa15.71■□□□□ 0.11
SLX1A-203ENST00000563616 AOC3Q16853 763 aa15.7■□□□□ 0.1
SLX1A-203ENST00000563616 CRAMP1Q96RY5 1269 aa15.7■□□□□ 0.1
SLX1A-203ENST00000563616 RSPH6AQ9H0K4 717 aa15.7■□□□□ 0.1
SLX1A-203ENST00000563616 ZNF408Q9H9D4 720 aa15.7■□□□□ 0.1
SLX1A-203ENST00000563616 NPC1L1Q9UHC9 1359 aa15.7■□□□□ 0.1
SLX1A-203ENST00000563616 GMPSP49915 693 aaPredicted RBP15.69■□□□□ 0.1
SLX1A-203ENST00000563616 CXCL9Q07325 125 aa15.69■□□□□ 0.1
SLX1A-203ENST00000563616 RTF1Q92541 710 aaKnown RBP15.69■□□□□ 0.1
SLX1A-203ENST00000563616 RBM17Q96I25 401 aaKnown RBP15.69■□□□□ 0.1
SLX1A-203ENST00000563616 IBTKQ9P2D0 1353 aaPredicted RBP15.69■□□□□ 0.1
SLX1A-203ENST00000563616 ERVV-1B6SEH8 477 aa15.68■□□□□ 0.1
SLX1A-203ENST00000563616 GPTP24298 496 aa15.68■□□□□ 0.1
SLX1A-203ENST00000563616 CNGB1Q14028 1251 aaPredicted RBP15.68■□□□□ 0.1
SLX1A-203ENST00000563616 NGEFQ8N5V2 710 aa15.68■□□□□ 0.1
SLX1A-203ENST00000563616 ZIC5Q96T25 663 aa15.68■□□□□ 0.1
SLX1A-203ENST00000563616 PGAP2Q9UHJ9 254 aa15.68■□□□□ 0.1
SLX1A-203ENST00000563616 ZNRF3Q9ULT6 936 aa15.68■□□□□ 0.1
SLX1A-203ENST00000563616 MAP3K15Q6ZN16 1313 aa15.68■□□□□ 0.1
SLX1A-203ENST00000563616 UBN2Q6ZU65 1347 aa15.68■□□□□ 0.1
SLX1A-203ENST00000563616 TRIM26Q12899 539 aaPredicted RBP15.67■□□□□ 0.1
SLX1A-203ENST00000563616 NOGQ13253 232 aa15.67■□□□□ 0.1
SLX1A-203ENST00000563616 DCTN1Q14203 1278 aa15.67■□□□□ 0.1
SLX1A-203ENST00000563616 C3orf67Q6ZVT6 689 aa15.67■□□□□ 0.1
SLX1A-203ENST00000563616 HIRAP54198 1017 aaPredicted RBP15.66■□□□□ 0.1
SLX1A-203ENST00000563616 SUSD4Q5VX71 490 aa15.66■□□□□ 0.1
SLX1A-203ENST00000563616 ZC3H15Q8WU90 426 aaKnown RBP15.66■□□□□ 0.1
SLX1A-203ENST00000563616 VPS33BQ9H267 617 aa15.66■□□□□ 0.1
SLX1A-203ENST00000563616 CDHR2Q9BYE9 1310 aa15.66■□□□□ 0.1
SLX1A-203ENST00000563616 SOX10P56693 466 aa15.65■□□□□ 0.1
SLX1A-203ENST00000563616 KIF6Q6ZMV9 814 aa15.65■□□□□ 0.1
SLX1A-203ENST00000563616 TTLL7Q6ZT98 887 aa15.65■□□□□ 0.1
SLX1A-203ENST00000563616 CDC37L1Q7L3B6 337 aa15.65■□□□□ 0.1
SLX1A-203ENST00000563616 TRPM4Q8TD43 1214 aa15.65■□□□□ 0.1
SLX1A-203ENST00000563616 TMX4Q9H1E5 349 aaPredicted RBP15.65■□□□□ 0.1
SLX1A-203ENST00000563616 ATP6V0A2Q9Y487 856 aa15.65■□□□□ 0.1
SLX1A-203ENST00000563616 POLR2AP24928 1970 aaKnown RBP15.64■□□□□ 0.09
SLX1A-203ENST00000563616 NTSR2O95665 410 aa15.64■□□□□ 0.09
SLX1A-203ENST00000563616 HUNKP57058 714 aa15.64■□□□□ 0.09
SLX1A-203ENST00000563616 SUPT20HQ8NEM7 779 aa15.64■□□□□ 0.09
SLX1A-203ENST00000563616 BCL2L13Q9BXK5 485 aa15.64■□□□□ 0.09
SLX1A-203ENST00000563616 RTFDC1Q9BY42 306 aaPredicted RBP15.64■□□□□ 0.09
SLX1A-203ENST00000563616 ZBTB3Q9H5J0 574 aa15.64■□□□□ 0.09
SLX1A-203ENST00000563616 MIS18AQ9NYP9 233 aa15.64■□□□□ 0.09
SLX1A-203ENST00000563616 RAD17O75943 681 aa15.63■□□□□ 0.09
SLX1A-203ENST00000563616 TAF7Q15545 349 aaPredicted RBP15.63■□□□□ 0.09
SLX1A-203ENST00000563616 ZNF34Q8IZ26 560 aa15.63■□□□□ 0.09
SLX1A-203ENST00000563616 PCGF6Q9BYE7 350 aa15.63■□□□□ 0.09
SLX1A-203ENST00000563616 RRP7AQ9Y3A4 280 aaKnown RBP15.63■□□□□ 0.09
SLX1A-203ENST00000563616 AKAP11Q9UKA4 1901 aa15.62■□□□□ 0.09
SLX1A-203ENST00000563616 KDM3BQ7LBC6 1761 aa15.62■□□□□ 0.09
SLX1A-203ENST00000563616 SHTN1A0MZ66 631 aa15.62■□□□□ 0.09
SLX1A-203ENST00000563616 HTATSF1O43719 755 aaKnown RBP15.62■□□□□ 0.09
SLX1A-203ENST00000563616 U2AF1L5P0DN76 240 aaPredicted RBP15.62■□□□□ 0.09
SLX1A-203ENST00000563616 U2AF1Q01081 240 aaKnown RBP eCLIP15.62■□□□□ 0.09
SLX1A-203ENST00000563616 CFAP53Q96M91 514 aa15.62■□□□□ 0.09
SLX1A-203ENST00000563616 ABCC4O15439 1325 aa15.62■□□□□ 0.09
SLX1A-203ENST00000563616 MYL6BP14649 208 aa15.61■□□□□ 0.09
SLX1A-203ENST00000563616 KIAA2012Q0VF49 1180 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms