RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 HYPKQ9NX55 129 aa19.19■□□□□ 0.66
RPUSD1-204ENST00000563560 TAF1P21675 1872 aa19.19■□□□□ 0.66
RPUSD1-204ENST00000563560 COL4A1P02462 1669 aa19.18■□□□□ 0.66
RPUSD1-204ENST00000563560 NPR1P16066 1061 aa19.17■□□□□ 0.66
RPUSD1-204ENST00000563560 RASSF7Q02833 373 aa19.17■□□□□ 0.66
RPUSD1-204ENST00000563560 PRPF40BQ6NWY9 871 aaKnown RBP19.17■□□□□ 0.66
RPUSD1-204ENST00000563560 ANKRD13DQ6ZTN6 518 aa19.17■□□□□ 0.66
RPUSD1-204ENST00000563560 ZNF622Q969S3 477 aaKnown RBP eCLIP19.17■□□□□ 0.66
RPUSD1-204ENST00000563560 RNF123Q5XPI4 1314 aa19.17■□□□□ 0.66
RPUSD1-204ENST00000563560 CCER2I3L3R5 266 aa19.16■□□□□ 0.66
RPUSD1-204ENST00000563560 HOXA10P31260 410 aaPredicted RBP19.16■□□□□ 0.66
RPUSD1-204ENST00000563560 SYNE4Q8N205 404 aa19.16■□□□□ 0.66
RPUSD1-204ENST00000563560 CNKSR1Q969H4 720 aa19.16■□□□□ 0.66
RPUSD1-204ENST00000563560 LRRC37AA6NMS7 1700 aa19.15■□□□□ 0.66
RPUSD1-204ENST00000563560 C21orf2O43822 256 aa19.15■□□□□ 0.66
RPUSD1-204ENST00000563560 TRIM28Q13263 835 aaKnown RBP19.15■□□□□ 0.66
RPUSD1-204ENST00000563560 HSP90AB3PQ58FF7 597 aa19.15■□□□□ 0.66
RPUSD1-204ENST00000563560 C9orf131Q5VYM1 1079 aa19.15■□□□□ 0.66
RPUSD1-204ENST00000563560 SALL2Q9Y467 1007 aaPredicted RBP19.15■□□□□ 0.66
RPUSD1-204ENST00000563560 LTBP3Q9NS15 1303 aa19.15■□□□□ 0.66
RPUSD1-204ENST00000563560 VAMP4O75379 141 aa19.14■□□□□ 0.65
RPUSD1-204ENST00000563560 TWISTNBQ3B726 338 aaPredicted RBP19.14■□□□□ 0.65
RPUSD1-204ENST00000563560 PPP1R42Q7Z4L9 355 aa19.14■□□□□ 0.65
RPUSD1-204ENST00000563560 CCDC30Q5VVM6 783 aa19.13■□□□□ 0.65
RPUSD1-204ENST00000563560 SLC51AQ86UW1 340 aa19.13■□□□□ 0.65
RPUSD1-204ENST00000563560 UTP14AQ9BVJ6 771 aaKnown RBP19.13■□□□□ 0.65
RPUSD1-204ENST00000563560 NPHP1O15259 732 aa19.12■□□□□ 0.65
RPUSD1-204ENST00000563560 EXOSC9Q06265 439 aaKnown RBP19.11■□□□□ 0.65
RPUSD1-204ENST00000563560 OLFM4Q6UX06 510 aa19.11■□□□□ 0.65
RPUSD1-204ENST00000563560 G2E3Q7L622 706 aa19.11■□□□□ 0.65
RPUSD1-204ENST00000563560 COL4A5P29400 1685 aa19.11■□□□□ 0.65
RPUSD1-204ENST00000563560 MYH3P11055 1940 aa19.1■□□□□ 0.65
RPUSD1-204ENST00000563560 ZC3H4Q9UPT8 1303 aaKnown RBP19.1■□□□□ 0.65
RPUSD1-204ENST00000563560 ATP5J2-PTCD1G3V325 749 aa19.1■□□□□ 0.65
RPUSD1-204ENST00000563560 LMNB1P20700 586 aa19.1■□□□□ 0.65
RPUSD1-204ENST00000563560 CRAMP1Q96RY5 1269 aa19.1■□□□□ 0.65
RPUSD1-204ENST00000563560 RNF181Q9P0P0 153 aa19.1■□□□□ 0.65
RPUSD1-204ENST00000563560 LTBP1Q14766 1721 aa19.1■□□□□ 0.65
RPUSD1-204ENST00000563560 WDR90Q96KV7 1748 aa19.09■□□□□ 0.65
RPUSD1-204ENST00000563560 KIF3CO14782 793 aa19.09■□□□□ 0.65
RPUSD1-204ENST00000563560 GTF2E1P29083 439 aaPredicted RBP19.09■□□□□ 0.65
RPUSD1-204ENST00000563560 SH3TC1Q8TE82 1336 aa19.08■□□□□ 0.65
RPUSD1-204ENST00000563560 TCERG1O14776 1098 aaKnown RBP19.08■□□□□ 0.64
RPUSD1-204ENST00000563560 ALDH1B1P30837 517 aa19.08■□□□□ 0.64
RPUSD1-204ENST00000563560 METTL22Q9BUU2 404 aaPredicted RBP19.08■□□□□ 0.64
RPUSD1-204ENST00000563560 CHMP4AQ9BY43 222 aa19.08■□□□□ 0.64
RPUSD1-204ENST00000563560 ZNF219Q9P2Y4 722 aaPredicted RBP19.08■□□□□ 0.64
RPUSD1-204ENST00000563560 DUOX1Q9NRD9 1551 aa19.07■□□□□ 0.64
RPUSD1-204ENST00000563560 IGKV5-2P06315 115 aa19.07■□□□□ 0.64
RPUSD1-204ENST00000563560 HCLS1P14317 486 aaPredicted RBP19.07■□□□□ 0.64
RPUSD1-204ENST00000563560 GOLGA2Q08379 1002 aa19.07■□□□□ 0.64
RPUSD1-204ENST00000563560 TRMT112Q9UI30 125 aaKnown RBP19.07■□□□□ 0.64
RPUSD1-204ENST00000563560 CEP350Q5VT06 3117 aa19.07■□□□□ 0.64
RPUSD1-204ENST00000563560 ABCC4O15439 1325 aa19.06■□□□□ 0.64
RPUSD1-204ENST00000563560 SOGA3Q5TF21 947 aa19.06■□□□□ 0.64
RPUSD1-204ENST00000563560 KSR2Q6VAB6 950 aa19.06■□□□□ 0.64
RPUSD1-204ENST00000563560 TRMT2AQ8IZ69 625 aaKnown RBP19.06■□□□□ 0.64
RPUSD1-204ENST00000563560 ZNF428Q96B54 188 aa19.06■□□□□ 0.64
RPUSD1-204ENST00000563560 FAM89AQ96GI7 184 aa19.06■□□□□ 0.64
RPUSD1-204ENST00000563560 NLRP3Q96P20 1036 aa19.06■□□□□ 0.64
RPUSD1-204ENST00000563560 GPBP1L1Q9HC44 474 aaPredicted RBP19.06■□□□□ 0.64
RPUSD1-204ENST00000563560 PI4KAP2A4QPH2 592 aa19.05■□□□□ 0.64
RPUSD1-204ENST00000563560 SLC4A2P04920 1241 aa19.05■□□□□ 0.64
RPUSD1-204ENST00000563560 CCDC93Q567U6 631 aa19.05■□□□□ 0.64
RPUSD1-204ENST00000563560 RIC3Q7Z5B4 369 aa19.05■□□□□ 0.64
RPUSD1-204ENST00000563560 PI4KAP1Q8N8J0 262 aa19.05■□□□□ 0.64
RPUSD1-204ENST00000563560 ZNF526Q8TF50 670 aaPredicted RBP19.05■□□□□ 0.64
RPUSD1-204ENST00000563560 TAOK3Q9H2K8 898 aa19.05■□□□□ 0.64
RPUSD1-204ENST00000563560 MAP3K2Q9Y2U5 619 aa19.05■□□□□ 0.64
RPUSD1-204ENST00000563560 FKBP4Q02790 459 aaKnown RBP eCLIP19.04■□□□□ 0.64
RPUSD1-204ENST00000563560 SF3B3Q15393 1217 aaKnown RBP19.04■□□□□ 0.64
RPUSD1-204ENST00000563560 CCDC191Q8NCU4 936 aa19.04■□□□□ 0.64
RPUSD1-204ENST00000563560 MYD88Q99836 296 aa19.04■□□□□ 0.64
RPUSD1-204ENST00000563560 MYH16Q9H6N6 1097 aa19.04■□□□□ 0.64
RPUSD1-204ENST00000563560 C1QTNF8P60827 252 aa19.03■□□□□ 0.64
RPUSD1-204ENST00000563560 SLFN5Q08AF3 891 aa19.03■□□□□ 0.64
RPUSD1-204ENST00000563560 FLIIQ13045 1269 aa19.03■□□□□ 0.64
RPUSD1-204ENST00000563560 ZBTB38Q8NAP3 1195 aaPredicted RBP19.03■□□□□ 0.64
RPUSD1-204ENST00000563560 RPGRQ92834 1020 aaKnown RBP19.03■□□□□ 0.64
RPUSD1-204ENST00000563560 RBM17Q96I25 401 aaKnown RBP19.03■□□□□ 0.64
RPUSD1-204ENST00000563560 PSMD1Q99460 953 aa19.03■□□□□ 0.64
RPUSD1-204ENST00000563560 STK31Q9BXU1 1019 aa19.03■□□□□ 0.64
RPUSD1-204ENST00000563560 NMRK2Q9NPI5 230 aa19.03■□□□□ 0.64
RPUSD1-204ENST00000563560 PCCAP05165 728 aaPredicted RBP19.02■□□□□ 0.64
RPUSD1-204ENST00000563560 RTKN2Q8IZC4 609 aa19.02■□□□□ 0.64
RPUSD1-204ENST00000563560 MIER1Q8N108 512 aa19.02■□□□□ 0.64
RPUSD1-204ENST00000563560 POTECB2RU33 542 aa19.01■□□□□ 0.63
RPUSD1-204ENST00000563560 PPEF1O14829 653 aaPredicted RBP19.01■□□□□ 0.63
RPUSD1-204ENST00000563560 DDX58O95786 925 aaKnown RBP19.01■□□□□ 0.63
RPUSD1-204ENST00000563560 DIEXFQ68CQ4 756 aaKnown RBP19.01■□□□□ 0.63
RPUSD1-204ENST00000563560 ATP6V0A2Q9Y487 856 aa19.01■□□□□ 0.63
RPUSD1-204ENST00000563560 CDHR2Q9BYE9 1310 aa19■□□□□ 0.63
RPUSD1-204ENST00000563560 GLTPD2A6NH11 291 aa19■□□□□ 0.63
RPUSD1-204ENST00000563560 NEURL1BA8MQ27 555 aa19■□□□□ 0.63
RPUSD1-204ENST00000563560 IRS4O14654 1257 aaPredicted RBP19■□□□□ 0.63
RPUSD1-204ENST00000563560 CC2D2BQ6DHV5 1058 aa19■□□□□ 0.63
RPUSD1-204ENST00000563560 CDCA7LQ96GN5 454 aa19■□□□□ 0.63
RPUSD1-204ENST00000563560 SPEF2Q9C093 1822 aa19■□□□□ 0.63
RPUSD1-204ENST00000563560 E9PSI1 815 aa18.99■□□□□ 0.63
RPUSD1-204ENST00000563560 CASP7P55210 303 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms