RNA–Protein interactions for RNA: ENST00000563510.5

FANCA-211, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-211ENST00000563510 RSPH6AQ9H0K4 717 aa14.29□□□□□ -0.12
FANCA-211ENST00000563510 NUDCQ9Y266 331 aa14.29□□□□□ -0.12
FANCA-211ENST00000563510 FARP1Q9Y4F1 1045 aaPredicted RBP14.29□□□□□ -0.12
FANCA-211ENST00000563510 SNRPA1P09661 255 aaKnown RBP14.28□□□□□ -0.12
FANCA-211ENST00000563510 NPR1P16066 1061 aa14.28□□□□□ -0.12
FANCA-211ENST00000563510 DDNO94850 711 aaPredicted RBP14.27□□□□□ -0.13
FANCA-211ENST00000563510 CNGB1Q14028 1251 aaPredicted RBP14.27□□□□□ -0.13
FANCA-211ENST00000563510 LDHDQ86WU2 507 aa14.27□□□□□ -0.13
FANCA-211ENST00000563510 L3MBTL3Q96JM7 780 aaPredicted RBP14.27□□□□□ -0.13
FANCA-211ENST00000563510 PHACTR3Q96KR7 559 aa14.27□□□□□ -0.13
FANCA-211ENST00000563510 USP16Q9Y5T5 823 aa14.27□□□□□ -0.13
FANCA-211ENST00000563510 KCNQ3O43525 872 aa14.26□□□□□ -0.13
FANCA-211ENST00000563510 ZNF467Q7Z7K2 595 aaPredicted RBP14.26□□□□□ -0.13
FANCA-211ENST00000563510 TRPM7Q96QT4 1865 aa14.25□□□□□ -0.13
FANCA-211ENST00000563510 FKBP4Q02790 459 aaKnown RBP eCLIP14.25□□□□□ -0.13
FANCA-211ENST00000563510 TPTE2Q6XPS3 522 aa14.25□□□□□ -0.13
FANCA-211ENST00000563510 CNTNAP1P78357 1384 aa14.24□□□□□ -0.13
FANCA-211ENST00000563510 KLRG2A4D1S0 409 aaPredicted RBP14.24□□□□□ -0.13
FANCA-211ENST00000563510 HTATSF1O43719 755 aaKnown RBP14.24□□□□□ -0.13
FANCA-211ENST00000563510 U2AF1L5P0DN76 240 aaPredicted RBP14.24□□□□□ -0.13
FANCA-211ENST00000563510 PIP4K2AP48426 406 aaPredicted RBP14.24□□□□□ -0.13
FANCA-211ENST00000563510 U2AF1Q01081 240 aaKnown RBP eCLIP14.24□□□□□ -0.13
FANCA-211ENST00000563510 RTKN2Q8IZC4 609 aa14.24□□□□□ -0.13
FANCA-211ENST00000563510 C7orf43Q8WVR3 580 aa14.24□□□□□ -0.13
FANCA-211ENST00000563510 MKRN1Q9UHC7 482 aaKnown RBP14.24□□□□□ -0.13
FANCA-211ENST00000563510 NIP7Q9Y221 180 aaKnown RBP eCLIP14.24□□□□□ -0.13
FANCA-211ENST00000563510 PASKQ96RG2 1323 aa14.23□□□□□ -0.13
FANCA-211ENST00000563510 POTEIP0CG38 1075 aa14.23□□□□□ -0.13
FANCA-211ENST00000563510 POTEJP0CG39 1038 aa14.23□□□□□ -0.13
FANCA-211ENST00000563510 ALDH1B1P30837 517 aa14.23□□□□□ -0.13
FANCA-211ENST00000563510 MCM10Q7L590 875 aa14.23□□□□□ -0.13
FANCA-211ENST00000563510 TAF1DQ9H5J8 278 aaPredicted RBP14.23□□□□□ -0.13
FANCA-211ENST00000563510 ANKRD36CQ5JPF3 1778 aa14.22□□□□□ -0.13
FANCA-211ENST00000563510 PRAMEF22A3QJZ6 481 aa14.22□□□□□ -0.13
FANCA-211ENST00000563510 HACL1Q9UJ83 578 aa14.22□□□□□ -0.13
FANCA-211ENST00000563510 RIC1Q4ADV7 1423 aa14.22□□□□□ -0.13
FANCA-211ENST00000563510 TMEM88BA6NKF7 163 aa14.21□□□□□ -0.13
FANCA-211ENST00000563510 GTF2E1P29083 439 aaPredicted RBP14.21□□□□□ -0.13
FANCA-211ENST00000563510 PNMA8AQ86V59 439 aaPredicted RBP14.21□□□□□ -0.13
FANCA-211ENST00000563510 NYXQ9GZU5 481 aa14.21□□□□□ -0.13
FANCA-211ENST00000563510 ZNF277Q9NRM2 450 aaPredicted RBP14.21□□□□□ -0.13
FANCA-211ENST00000563510 ZNF541Q9H0D2 1346 aa14.2□□□□□ -0.14
FANCA-211ENST00000563510 THSD7BQ9C0I4 1608 aa14.2□□□□□ -0.14
FANCA-211ENST00000563510 NBPF26B4DH59 902 aa14.2□□□□□ -0.14
FANCA-211ENST00000563510 NEFMP07197 916 aa14.2□□□□□ -0.14
FANCA-211ENST00000563510 IARSP41252 1262 aaKnown RBP14.2□□□□□ -0.14
FANCA-211ENST00000563510 TAF7Q15545 349 aaPredicted RBP14.2□□□□□ -0.14
FANCA-211ENST00000563510 EAPPQ56P03 285 aaPredicted RBP14.2□□□□□ -0.14
FANCA-211ENST00000563510 NBPF10Q6P3W6 841 aaKnown RBP14.2□□□□□ -0.14
FANCA-211ENST00000563510 NBPF15Q8N660 670 aa14.2□□□□□ -0.14
FANCA-211ENST00000563510 AIDAQ96BJ3 306 aa14.2□□□□□ -0.14
FANCA-211ENST00000563510 IBTKQ9P2D0 1353 aaPredicted RBP14.2□□□□□ -0.14
FANCA-211ENST00000563510 LAMB2P55268 1798 aa14.19□□□□□ -0.14
FANCA-211ENST00000563510 SNED1Q8TER0 1413 aa14.19□□□□□ -0.14
FANCA-211ENST00000563510 PRKAR2AP13861 404 aaKnown RBP14.19□□□□□ -0.14
FANCA-211ENST00000563510 PPP2R1AP30153 589 aa14.19□□□□□ -0.14
FANCA-211ENST00000563510 EPHX2P34913 555 aa14.19□□□□□ -0.14
FANCA-211ENST00000563510 PDAP1Q13442 181 aaKnown RBP14.19□□□□□ -0.14
FANCA-211ENST00000563510 GPC2Q8N158 579 aa14.19□□□□□ -0.14
FANCA-211ENST00000563510 PSMD1Q99460 953 aa14.19□□□□□ -0.14
FANCA-211ENST00000563510 PCDHB8Q9UN66 801 aa14.19□□□□□ -0.14
FANCA-211ENST00000563510 PCDHB13Q9Y5F0 798 aa14.19□□□□□ -0.14
FANCA-211ENST00000563510 FAM177BA6PVY3 158 aa14.18□□□□□ -0.14
FANCA-211ENST00000563510 ERVV-1B6SEH8 477 aa14.18□□□□□ -0.14
FANCA-211ENST00000563510 FZD9O00144 591 aa14.18□□□□□ -0.14
FANCA-211ENST00000563510 DCTN1Q14203 1278 aa14.18□□□□□ -0.14
FANCA-211ENST00000563510 CRY2Q49AN0 593 aa14.18□□□□□ -0.14
FANCA-211ENST00000563510 GRIPAP1Q4V328 841 aa14.18□□□□□ -0.14
FANCA-211ENST00000563510 CC2D2BQ6DHV5 1058 aa14.18□□□□□ -0.14
FANCA-211ENST00000563510 PNISRQ8TF01 805 aaKnown RBP14.18□□□□□ -0.14
FANCA-211ENST00000563510 JDP2Q8WYK2 163 aa14.18□□□□□ -0.14
FANCA-211ENST00000563510 PRDM10Q9NQV6 1147 aa14.18□□□□□ -0.14
FANCA-211ENST00000563510 LTBP1Q14766 1721 aa14.18□□□□□ -0.14
FANCA-211ENST00000563510 RNF123Q5XPI4 1314 aa14.17□□□□□ -0.14
FANCA-211ENST00000563510 FOXN1O15353 648 aa14.17□□□□□ -0.14
FANCA-211ENST00000563510 ITGBL1O95965 494 aaPredicted RBP14.17□□□□□ -0.14
FANCA-211ENST00000563510 CTCFP49711 727 aaPredicted RBP14.17□□□□□ -0.14
FANCA-211ENST00000563510 HLFQ16534 295 aa14.17□□□□□ -0.14
FANCA-211ENST00000563510 KIF6Q6ZMV9 814 aa14.17□□□□□ -0.14
FANCA-211ENST00000563510 SYNE4Q8N205 404 aa14.17□□□□□ -0.14
FANCA-211ENST00000563510 ABCC12Q96J65 1359 aa14.17□□□□□ -0.14
FANCA-211ENST00000563510 MAP3K15Q6ZN16 1313 aa14.16□□□□□ -0.14
FANCA-211ENST00000563510 VEGFBP49765 207 aa14.16□□□□□ -0.14
FANCA-211ENST00000563510 OLFM4Q6UX06 510 aa14.16□□□□□ -0.14
FANCA-211ENST00000563510 RPGRQ92834 1020 aaKnown RBP14.16□□□□□ -0.14
FANCA-211ENST00000563510 COL4A5P29400 1685 aa14.15□□□□□ -0.14
FANCA-211ENST00000563510 LMOD1P29536 600 aaPredicted RBP14.15□□□□□ -0.14
FANCA-211ENST00000563510 EIF6P56537 245 aaKnown RBP14.15□□□□□ -0.14
FANCA-211ENST00000563510 RASSF10A6NK89 507 aa14.14□□□□□ -0.15
FANCA-211ENST00000563510 CNTROBQ8N137 903 aa14.14□□□□□ -0.15
FANCA-211ENST00000563510 ERBB4Q15303 1308 aa14.14□□□□□ -0.15
FANCA-211ENST00000563510 HOXA10P31260 410 aaPredicted RBP14.13□□□□□ -0.15
FANCA-211ENST00000563510 DEFB115Q30KQ5 88 aa14.13□□□□□ -0.15
FANCA-211ENST00000563510 MAP1SQ66K74 1059 aaPredicted RBP14.13□□□□□ -0.15
FANCA-211ENST00000563510 NUTM1Q86Y26 1132 aa14.13□□□□□ -0.15
FANCA-211ENST00000563510 MAP2K1Q02750 393 aaPredicted RBP14.12□□□□□ -0.15
FANCA-211ENST00000563510 LARGE2Q8N3Y3 721 aa14.12□□□□□ -0.15
FANCA-211ENST00000563510 NGEFQ8N5V2 710 aa14.12□□□□□ -0.15
FANCA-211ENST00000563510 RBM17Q96I25 401 aaKnown RBP14.12□□□□□ -0.15
FANCA-211ENST00000563510 CRAMP1Q96RY5 1269 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms