RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-205ENST00000563293 MLLT1Q03111 559 aaPredicted RBP12.42□□□□□ -0.42
RPAP1-205ENST00000563293 CCDC184Q52MB2 194 aa12.42□□□□□ -0.42
RPAP1-205ENST00000563293 RTKN2Q8IZC4 609 aa12.42□□□□□ -0.42
RPAP1-205ENST00000563293 GPC2Q8N158 579 aa12.42□□□□□ -0.42
RPAP1-205ENST00000563293 CAPNS2Q96L46 248 aa12.42□□□□□ -0.42
RPAP1-205ENST00000563293 GJA3Q9Y6H8 435 aa12.42□□□□□ -0.42
RPAP1-205ENST00000563293 COL3A1P02461 1466 aaPredicted RBP12.41□□□□□ -0.42
RPAP1-205ENST00000563293 SCNN1DP51172 638 aa12.41□□□□□ -0.42
RPAP1-205ENST00000563293 CLEC4GQ6UXB4 293 aa12.41□□□□□ -0.42
RPAP1-205ENST00000563293 GPR101Q96P66 508 aaPredicted RBP12.41□□□□□ -0.42
RPAP1-205ENST00000563293 NIP7Q9Y221 180 aaKnown RBP eCLIP12.41□□□□□ -0.42
RPAP1-205ENST00000563293 CEMIPQ8WUJ3 1361 aa12.41□□□□□ -0.42
RPAP1-205ENST00000563293 THSD7BQ9C0I4 1608 aa12.4□□□□□ -0.42
RPAP1-205ENST00000563293 U2SURPO15042 1029 aaKnown RBP12.4□□□□□ -0.42
RPAP1-205ENST00000563293 TPTE2Q6XPS3 522 aa12.4□□□□□ -0.42
RPAP1-205ENST00000563293 PAXIP1Q6ZW49 1069 aaPredicted RBP12.4□□□□□ -0.42
RPAP1-205ENST00000563293 FAM9BQ8IZU0 186 aa12.4□□□□□ -0.42
RPAP1-205ENST00000563293 NPM2Q86SE8 214 aaKnown RBP12.39□□□□□ -0.43
RPAP1-205ENST00000563293 NUTM1Q86Y26 1132 aa12.39□□□□□ -0.43
RPAP1-205ENST00000563293 NGEFQ8N5V2 710 aa12.39□□□□□ -0.43
RPAP1-205ENST00000563293 GAS2L2Q8NHY3 880 aa12.39□□□□□ -0.43
RPAP1-205ENST00000563293 TRPM7Q96QT4 1865 aa12.39□□□□□ -0.43
RPAP1-205ENST00000563293 ABCC12Q96J65 1359 aa12.39□□□□□ -0.43
RPAP1-205ENST00000563293 PSMD1Q99460 953 aa12.38□□□□□ -0.43
RPAP1-205ENST00000563293 TCERG1O14776 1098 aaKnown RBP12.37□□□□□ -0.43
RPAP1-205ENST00000563293 NEFMP07197 916 aa12.37□□□□□ -0.43
RPAP1-205ENST00000563293 U2AF1L5P0DN76 240 aaPredicted RBP12.37□□□□□ -0.43
RPAP1-205ENST00000563293 ALDH1B1P30837 517 aa12.37□□□□□ -0.43
RPAP1-205ENST00000563293 U2AF1Q01081 240 aaKnown RBP eCLIP12.37□□□□□ -0.43
RPAP1-205ENST00000563293 CRY2Q49AN0 593 aa12.37□□□□□ -0.43
RPAP1-205ENST00000563293 NCBP3Q53F19 620 aaKnown RBP12.37□□□□□ -0.43
RPAP1-205ENST00000563293 C3orf67Q6ZVT6 689 aa12.37□□□□□ -0.43
RPAP1-205ENST00000563293 MCM10Q7L590 875 aa12.37□□□□□ -0.43
RPAP1-205ENST00000563293 JDP2Q8WYK2 163 aa12.37□□□□□ -0.43
RPAP1-205ENST00000563293 ZIC5Q96T25 663 aa12.37□□□□□ -0.43
RPAP1-205ENST00000563293 MCOLN1Q9GZU1 580 aa12.37□□□□□ -0.43
RPAP1-205ENST00000563293 ADAMTS8Q9UP79 889 aa12.37□□□□□ -0.43
RPAP1-205ENST00000563293 TLL2Q9Y6L7 1015 aa12.37□□□□□ -0.43
RPAP1-205ENST00000563293 PDE4DIPQ5VU43 2346 aa12.37□□□□□ -0.43
RPAP1-205ENST00000563293 SNRPA1P09661 255 aaKnown RBP12.36□□□□□ -0.43
RPAP1-205ENST00000563293 EIF6P56537 245 aaKnown RBP12.36□□□□□ -0.43
RPAP1-205ENST00000563293 DCTN1Q14203 1278 aa12.36□□□□□ -0.43
RPAP1-205ENST00000563293 MIS18AQ9NYP9 233 aa12.36□□□□□ -0.43
RPAP1-205ENST00000563293 ZNF652Q9Y2D9 606 aa12.36□□□□□ -0.43
RPAP1-205ENST00000563293 LMOD1P29536 600 aaPredicted RBP12.35□□□□□ -0.43
RPAP1-205ENST00000563293 PRKAR2BP31323 418 aa12.35□□□□□ -0.43
RPAP1-205ENST00000563293 ECE1P42892 770 aa12.35□□□□□ -0.43
RPAP1-205ENST00000563293 DLK2Q6UY11 383 aa12.35□□□□□ -0.43
RPAP1-205ENST00000563293 SAPCD2Q86UD0 394 aa12.35□□□□□ -0.43
RPAP1-205ENST00000563293 CFAP44Q96MT7 982 aa12.35□□□□□ -0.43
RPAP1-205ENST00000563293 BEGAINQ9BUH8 593 aa12.35□□□□□ -0.43
RPAP1-205ENST00000563293 RSPH6AQ9H0K4 717 aa12.35□□□□□ -0.43
RPAP1-205ENST00000563293 GTF2E1P29083 439 aaPredicted RBP12.34□□□□□ -0.43
RPAP1-205ENST00000563293 USP50Q70EL3 339 aaPredicted RBP12.34□□□□□ -0.43
RPAP1-205ENST00000563293 LARGE2Q8N3Y3 721 aa12.34□□□□□ -0.43
RPAP1-205ENST00000563293 RUNDC1Q96C34 613 aa12.34□□□□□ -0.43
RPAP1-205ENST00000563293 GLIS2Q9BZE0 524 aaPredicted RBP12.34□□□□□ -0.43
RPAP1-205ENST00000563293 NUP98P52948 1817 aa12.34□□□□□ -0.43
RPAP1-205ENST00000563293 SHTN1A0MZ66 631 aa12.33□□□□□ -0.44
RPAP1-205ENST00000563293 CELF2O95319 508 aaKnown RBP12.33□□□□□ -0.44
RPAP1-205ENST00000563293 HOXA10P31260 410 aaPredicted RBP12.33□□□□□ -0.44
RPAP1-205ENST00000563293 MAP2K2P36507 400 aa12.33□□□□□ -0.44
RPAP1-205ENST00000563293 HIRAP54198 1017 aaPredicted RBP12.33□□□□□ -0.44
RPAP1-205ENST00000563293 TTLL7Q6ZT98 887 aa12.33□□□□□ -0.44
RPAP1-205ENST00000563293 GPRC5DQ9NZD1 345 aa12.33□□□□□ -0.44
RPAP1-205ENST00000563293 UBN2Q6ZU65 1347 aa12.33□□□□□ -0.44
RPAP1-205ENST00000563293 GPTP24298 496 aa12.32□□□□□ -0.44
RPAP1-205ENST00000563293 CXCL9Q07325 125 aa12.32□□□□□ -0.44
RPAP1-205ENST00000563293 AOC3Q16853 763 aa12.32□□□□□ -0.44
RPAP1-205ENST00000563293 SUSD4Q5VX71 490 aa12.32□□□□□ -0.44
RPAP1-205ENST00000563293 CIAPIN1Q6FI81 312 aa12.32□□□□□ -0.44
RPAP1-205ENST00000563293 PCDH10Q9P2E7 1040 aa12.32□□□□□ -0.44
RPAP1-205ENST00000563293 DGKZQ13574 1117 aa12.31□□□□□ -0.44
RPAP1-205ENST00000563293 MAPK8IP3Q9UPT6 1336 aa12.31□□□□□ -0.44
RPAP1-205ENST00000563293 PPEF1O14829 653 aaPredicted RBP12.3□□□□□ -0.44
RPAP1-205ENST00000563293 RGL2O15211 777 aa12.3□□□□□ -0.44
RPAP1-205ENST00000563293 PPIP5K2O43314 1243 aa12.3□□□□□ -0.44
RPAP1-205ENST00000563293 GMPSP49915 693 aaPredicted RBP12.3□□□□□ -0.44
RPAP1-205ENST00000563293 CC2D2BQ6DHV5 1058 aa12.3□□□□□ -0.44
RPAP1-205ENST00000563293 NIM1KQ8IY84 436 aa12.3□□□□□ -0.44
RPAP1-205ENST00000563293 RPGRQ92834 1020 aaKnown RBP12.3□□□□□ -0.44
RPAP1-205ENST00000563293 PLEKHF1Q96S99 279 aa12.3□□□□□ -0.44
RPAP1-205ENST00000563293 ZNF408Q9H9D4 720 aa12.3□□□□□ -0.44
RPAP1-205ENST00000563293 ADARB2Q9NS39 739 aaKnown RBP12.3□□□□□ -0.44
RPAP1-205ENST00000563293 PGAP2Q9UHJ9 254 aa12.3□□□□□ -0.44
RPAP1-205ENST00000563293 POLR2AP24928 1970 aaKnown RBP12.29□□□□□ -0.44
RPAP1-205ENST00000563293 BRPF1P55201 1214 aaPredicted RBP12.29□□□□□ -0.44
RPAP1-205ENST00000563293 HNRNPUQ00839 825 aaKnown RBP eCLIP12.29□□□□□ -0.44
RPAP1-205ENST00000563293 TRPM4Q8TD43 1214 aa12.29□□□□□ -0.44
RPAP1-205ENST00000563293 CRAMP1Q96RY5 1269 aa12.29□□□□□ -0.44
RPAP1-205ENST00000563293 ZBTB3Q9H5J0 574 aa12.29□□□□□ -0.44
RPAP1-205ENST00000563293 RRP7AQ9Y3A4 280 aaKnown RBP12.29□□□□□ -0.44
RPAP1-205ENST00000563293 MAP3K15Q6ZN16 1313 aa12.29□□□□□ -0.44
RPAP1-205ENST00000563293 RIC1Q4ADV7 1423 aa12.28□□□□□ -0.44
RPAP1-205ENST00000563293 ERVV-1B6SEH8 477 aa12.28□□□□□ -0.44
RPAP1-205ENST00000563293 MYL6BP14649 208 aa12.28□□□□□ -0.44
RPAP1-205ENST00000563293 CCDC27Q2M243 656 aa12.28□□□□□ -0.44
RPAP1-205ENST00000563293 ZNF34Q8IZ26 560 aa12.28□□□□□ -0.44
RPAP1-205ENST00000563293 RBM17Q96I25 401 aaKnown RBP12.28□□□□□ -0.44
RPAP1-205ENST00000563293 NYXQ9GZU5 481 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms