RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 IFT57Q9NWB7 429 aa19.81■□□□□ 0.76
LPCAT4-204ENST00000563240 DBF4Q9UBU7 674 aaPredicted RBP19.81■□□□□ 0.76
LPCAT4-204ENST00000563240 LTBP3Q9NS15 1303 aa19.8■□□□□ 0.76
LPCAT4-204ENST00000563240 CACNA1SQ13698 1873 aa19.8■□□□□ 0.76
LPCAT4-204ENST00000563240 TCIRG1Q13488 830 aa19.8■□□□□ 0.76
LPCAT4-204ENST00000563240 HSP90AB3PQ58FF7 597 aa19.8■□□□□ 0.76
LPCAT4-204ENST00000563240 SYNE4Q8N205 404 aa19.8■□□□□ 0.76
LPCAT4-204ENST00000563240 RBM46Q8TBY0 533 aaKnown RBP19.8■□□□□ 0.76
LPCAT4-204ENST00000563240 ZNF277Q9NRM2 450 aaPredicted RBP19.8■□□□□ 0.76
LPCAT4-204ENST00000563240 TNRC6CQ9HCJ0 1690 aaKnown RBP19.79■□□□□ 0.76
LPCAT4-204ENST00000563240 HOXB7P09629 217 aa19.79■□□□□ 0.76
LPCAT4-204ENST00000563240 VEGFAP15692 232 aaPredicted RBP19.79■□□□□ 0.76
LPCAT4-204ENST00000563240 FKBP4Q02790 459 aaKnown RBP eCLIP19.79■□□□□ 0.76
LPCAT4-204ENST00000563240 ANKRD13DQ6ZTN6 518 aa19.79■□□□□ 0.76
LPCAT4-204ENST00000563240 NLRP10Q86W26 655 aa19.79■□□□□ 0.76
LPCAT4-204ENST00000563240 NLRP3Q96P20 1036 aa19.79■□□□□ 0.76
LPCAT4-204ENST00000563240 IBTKQ9P2D0 1353 aaPredicted RBP19.79■□□□□ 0.76
LPCAT4-204ENST00000563240 RTKN2Q8IZC4 609 aa19.78■□□□□ 0.76
LPCAT4-204ENST00000563240 C8orf58Q8NAV2 365 aa19.78■□□□□ 0.76
LPCAT4-204ENST00000563240 RBM17Q96I25 401 aaKnown RBP19.78■□□□□ 0.76
LPCAT4-204ENST00000563240 TRMT112Q9UI30 125 aaKnown RBP19.78■□□□□ 0.76
LPCAT4-204ENST00000563240 CCDC88AQ3V6T2 1871 aa19.77■□□□□ 0.76
LPCAT4-204ENST00000563240 ATP5J2-PTCD1G3V325 749 aa19.77■□□□□ 0.76
LPCAT4-204ENST00000563240 DDNO94850 711 aaPredicted RBP19.77■□□□□ 0.76
LPCAT4-204ENST00000563240 HCLS1P14317 486 aaPredicted RBP19.77■□□□□ 0.76
LPCAT4-204ENST00000563240 HOXA10P31260 410 aaPredicted RBP19.77■□□□□ 0.76
LPCAT4-204ENST00000563240 SLC51AQ86UW1 340 aa19.77■□□□□ 0.76
LPCAT4-204ENST00000563240 PLBD2Q8NHP8 589 aa19.77■□□□□ 0.76
LPCAT4-204ENST00000563240 FER1L6Q2WGJ9 1857 aa19.77■□□□□ 0.76
LPCAT4-204ENST00000563240 SLC10A5Q5PT55 438 aa19.76■□□□□ 0.75
LPCAT4-204ENST00000563240 HYPKQ9NX55 129 aa19.76■□□□□ 0.75
LPCAT4-204ENST00000563240 SALL2Q9Y467 1007 aaPredicted RBP19.76■□□□□ 0.75
LPCAT4-204ENST00000563240 POTECB2RU33 542 aa19.75■□□□□ 0.75
LPCAT4-204ENST00000563240 PPEF1O14829 653 aaPredicted RBP19.75■□□□□ 0.75
LPCAT4-204ENST00000563240 CRAMP1Q96RY5 1269 aa19.75■□□□□ 0.75
LPCAT4-204ENST00000563240 TIAM2Q8IVF5 1701 aa19.74■□□□□ 0.75
LPCAT4-204ENST00000563240 TSR2Q969E8 191 aaKnown RBP19.74■□□□□ 0.75
LPCAT4-204ENST00000563240 PHAXQ9H814 394 aaKnown RBP19.74■□□□□ 0.75
LPCAT4-204ENST00000563240 SH3TC1Q8TE82 1336 aa19.74■□□□□ 0.75
LPCAT4-204ENST00000563240 ARFGEF2Q9Y6D5 1785 aa19.73■□□□□ 0.75
LPCAT4-204ENST00000563240 IARSP41252 1262 aaKnown RBP19.73■□□□□ 0.75
LPCAT4-204ENST00000563240 APLP1P51693 650 aa19.73■□□□□ 0.75
LPCAT4-204ENST00000563240 HTRA3P83110 453 aa19.73■□□□□ 0.75
LPCAT4-204ENST00000563240 FSTL1Q12841 308 aa19.73■□□□□ 0.75
LPCAT4-204ENST00000563240 RTL5Q5HYW3 569 aaPredicted RBP19.73■□□□□ 0.75
LPCAT4-204ENST00000563240 WWC1Q8IX03 1113 aa19.73■□□□□ 0.75
LPCAT4-204ENST00000563240 TSPYL6Q8N831 410 aa19.73■□□□□ 0.75
LPCAT4-204ENST00000563240 SMC1BQ8NDV3 1235 aa19.73■□□□□ 0.75
LPCAT4-204ENST00000563240 RIC1Q4ADV7 1423 aa19.73■□□□□ 0.75
LPCAT4-204ENST00000563240 CC2D2BQ6DHV5 1058 aa19.72■□□□□ 0.75
LPCAT4-204ENST00000563240 RIC3Q7Z5B4 369 aa19.72■□□□□ 0.75
LPCAT4-204ENST00000563240 GOLGA2Q08379 1002 aa19.71■□□□□ 0.75
LPCAT4-204ENST00000563240 FAM89AQ96GI7 184 aa19.71■□□□□ 0.75
LPCAT4-204ENST00000563240 ISCA1Q9BUE6 129 aa19.71■□□□□ 0.75
LPCAT4-204ENST00000563240 TMX4Q9H1E5 349 aaPredicted RBP19.71■□□□□ 0.75
LPCAT4-204ENST00000563240 ABCC4O15439 1325 aa19.71■□□□□ 0.75
LPCAT4-204ENST00000563240 RNF123Q5XPI4 1314 aa19.71■□□□□ 0.75
LPCAT4-204ENST00000563240 ZNF541Q9H0D2 1346 aa19.71■□□□□ 0.75
LPCAT4-204ENST00000563240 PSMD1Q99460 953 aa19.7■□□□□ 0.74
LPCAT4-204ENST00000563240 CCDC27Q2M243 656 aa19.69■□□□□ 0.74
LPCAT4-204ENST00000563240 CCDC30Q5VVM6 783 aa19.69■□□□□ 0.74
LPCAT4-204ENST00000563240 DDX46Q7L014 1031 aaKnown RBP19.69■□□□□ 0.74
LPCAT4-204ENST00000563240 JDP2Q8WYK2 163 aa19.69■□□□□ 0.74
LPCAT4-204ENST00000563240 FAM9BQ8IZU0 186 aa19.68■□□□□ 0.74
LPCAT4-204ENST00000563240 MYD88Q99836 296 aa19.68■□□□□ 0.74
LPCAT4-204ENST00000563240 ATP6V0A2Q9Y487 856 aa19.68■□□□□ 0.74
LPCAT4-204ENST00000563240 DICER1Q9UPY3 1922 aaKnown RBP19.67■□□□□ 0.74
LPCAT4-204ENST00000563240 POTEIP0CG38 1075 aa19.67■□□□□ 0.74
LPCAT4-204ENST00000563240 POTEJP0CG39 1038 aa19.67■□□□□ 0.74
LPCAT4-204ENST00000563240 LARGE2Q8N3Y3 721 aa19.67■□□□□ 0.74
LPCAT4-204ENST00000563240 SNED1Q8TER0 1413 aa19.67■□□□□ 0.74
LPCAT4-204ENST00000563240 FZD9O00144 591 aa19.66■□□□□ 0.74
LPCAT4-204ENST00000563240 BBOX1O75936 387 aa19.66■□□□□ 0.74
LPCAT4-204ENST00000563240 GRIPAP1Q4V328 841 aa19.66■□□□□ 0.74
LPCAT4-204ENST00000563240 JARID2Q92833 1246 aaPredicted RBP19.66■□□□□ 0.74
LPCAT4-204ENST00000563240 GJA3Q9Y6H8 435 aa19.66■□□□□ 0.74
LPCAT4-204ENST00000563240 WDR90Q96KV7 1748 aa19.65■□□□□ 0.74
LPCAT4-204ENST00000563240 ANKRD36CQ5JPF3 1778 aa19.65■□□□□ 0.74
LPCAT4-204ENST00000563240 IRS4O14654 1257 aaPredicted RBP19.65■□□□□ 0.74
LPCAT4-204ENST00000563240 TWISTNBQ3B726 338 aaPredicted RBP19.65■□□□□ 0.74
LPCAT4-204ENST00000563240 DNAJC5GQ8N7S2 189 aa19.65■□□□□ 0.74
LPCAT4-204ENST00000563240 IQCA1LA6NCM1 817 aa19.64■□□□□ 0.73
LPCAT4-204ENST00000563240 PPIP5K2O43314 1243 aa19.64■□□□□ 0.73
LPCAT4-204ENST00000563240 DDX58O95786 925 aaKnown RBP19.64■□□□□ 0.73
LPCAT4-204ENST00000563240 EIF6P56537 245 aaKnown RBP19.64■□□□□ 0.73
LPCAT4-204ENST00000563240 TRIM28Q13263 835 aaKnown RBP19.64■□□□□ 0.73
LPCAT4-204ENST00000563240 GRAPQ13588 217 aa19.64■□□□□ 0.73
LPCAT4-204ENST00000563240 EAPPQ56P03 285 aaPredicted RBP19.64■□□□□ 0.73
LPCAT4-204ENST00000563240 SP8Q8IXZ3 490 aa19.64■□□□□ 0.73
LPCAT4-204ENST00000563240 GRAPLQ8TC17 118 aaPredicted RBP19.64■□□□□ 0.73
LPCAT4-204ENST00000563240 STK31Q9BXU1 1019 aa19.64■□□□□ 0.73
LPCAT4-204ENST00000563240 CHMP4AQ9BY43 222 aa19.64■□□□□ 0.73
LPCAT4-204ENST00000563240 CEP350Q5VT06 3117 aa19.64■□□□□ 0.73
LPCAT4-204ENST00000563240 AOC3Q16853 763 aa19.63■□□□□ 0.73
LPCAT4-204ENST00000563240 DPP8Q6V1X1 898 aaPredicted RBP19.63■□□□□ 0.73
LPCAT4-204ENST00000563240 NIM1KQ8IY84 436 aa19.63■□□□□ 0.73
LPCAT4-204ENST00000563240 MPNDQ8N594 471 aa19.63■□□□□ 0.73
LPCAT4-204ENST00000563240 L3MBTL3Q96JM7 780 aaPredicted RBP19.63■□□□□ 0.73
LPCAT4-204ENST00000563240 TAF1DQ9H5J8 278 aaPredicted RBP19.63■□□□□ 0.73
LPCAT4-204ENST00000563240 MAP3K2Q9Y2U5 619 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms