RNA–Protein interactions for RNA: ENST00000562884.1

CYLD-204, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-204ENST00000562884 SALL2Q9Y467 1007 aaPredicted RBP11.44□□□□□ -0.58
CYLD-204ENST00000562884 COL11A2P13942 1736 aaPredicted RBP11.43□□□□□ -0.58
CYLD-204ENST00000562884 SUSD4Q5VX71 490 aa11.43□□□□□ -0.58
CYLD-204ENST00000562884 RIC3Q7Z5B4 369 aa11.43□□□□□ -0.58
CYLD-204ENST00000562884 CCDC24Q8N4L8 307 aa11.43□□□□□ -0.58
CYLD-204ENST00000562884 NLRP3Q96P20 1036 aa11.43□□□□□ -0.58
CYLD-204ENST00000562884 SLX4Q8IY92 1834 aa11.43□□□□□ -0.58
CYLD-204ENST00000562884 FER1L6Q2WGJ9 1857 aa11.42□□□□□ -0.58
CYLD-204ENST00000562884 UBN2Q6ZU65 1347 aa11.42□□□□□ -0.58
CYLD-204ENST00000562884 NTSR2O95665 410 aa11.42□□□□□ -0.58
CYLD-204ENST00000562884 HSP90B1P14625 803 aaKnown RBP11.42□□□□□ -0.58
CYLD-204ENST00000562884 TRIM28Q13263 835 aaKnown RBP11.42□□□□□ -0.58
CYLD-204ENST00000562884 ERFEQ4G0M1 354 aa11.42□□□□□ -0.58
CYLD-204ENST00000562884 SLC10A5Q5PT55 438 aa11.42□□□□□ -0.58
CYLD-204ENST00000562884 NLRP10Q86W26 655 aa11.42□□□□□ -0.58
CYLD-204ENST00000562884 DICER1Q9UPY3 1922 aaKnown RBP11.42□□□□□ -0.58
CYLD-204ENST00000562884 FANCIQ9NVI1 1328 aa11.41□□□□□ -0.58
CYLD-204ENST00000562884 CRY2Q49AN0 593 aa11.41□□□□□ -0.58
CYLD-204ENST00000562884 GRIPAP1Q4V328 841 aa11.41□□□□□ -0.58
CYLD-204ENST00000562884 PRPF40BQ6NWY9 871 aaKnown RBP11.41□□□□□ -0.58
CYLD-204ENST00000562884 NUTM1Q86Y26 1132 aa11.41□□□□□ -0.58
CYLD-204ENST00000562884 TSPYL6Q8N831 410 aa11.41□□□□□ -0.58
CYLD-204ENST00000562884 CNKSR2Q8WXI2 1034 aa11.41□□□□□ -0.58
CYLD-204ENST00000562884 RPGRQ92834 1020 aaKnown RBP11.41□□□□□ -0.58
CYLD-204ENST00000562884 RBM17Q96I25 401 aaKnown RBP11.41□□□□□ -0.58
CYLD-204ENST00000562884 TRMT112Q9UI30 125 aaKnown RBP11.41□□□□□ -0.58
CYLD-204ENST00000562884 ADCY9O60503 1353 aa11.41□□□□□ -0.58
CYLD-204ENST00000562884 SH3TC1Q8TE82 1336 aa11.4□□□□□ -0.58
CYLD-204ENST00000562884 ZC3H4Q9UPT8 1303 aaKnown RBP11.4□□□□□ -0.58
CYLD-204ENST00000562884 SENP3-EIF4A1A0A087X0R7 540 aa11.4□□□□□ -0.58
CYLD-204ENST00000562884 LMNB1P20700 586 aa11.4□□□□□ -0.58
CYLD-204ENST00000562884 HOXA10P31260 410 aaPredicted RBP11.4□□□□□ -0.58
CYLD-204ENST00000562884 C9orf131Q5VYM1 1079 aa11.4□□□□□ -0.58
CYLD-204ENST00000562884 CC2D2BQ6DHV5 1058 aa11.4□□□□□ -0.58
CYLD-204ENST00000562884 ISCA1Q9BUE6 129 aa11.4□□□□□ -0.58
CYLD-204ENST00000562884 TMX4Q9H1E5 349 aaPredicted RBP11.4□□□□□ -0.58
CYLD-204ENST00000562884 PHAXQ9H814 394 aaKnown RBP11.4□□□□□ -0.58
CYLD-204ENST00000562884 LTBP3Q9NS15 1303 aa11.39□□□□□ -0.59
CYLD-204ENST00000562884 E9PSI1 815 aa11.39□□□□□ -0.59
CYLD-204ENST00000562884 C21orf2O43822 256 aa11.39□□□□□ -0.59
CYLD-204ENST00000562884 VAMP4O75379 141 aa11.39□□□□□ -0.59
CYLD-204ENST00000562884 SLC4A2P04920 1241 aa11.39□□□□□ -0.59
CYLD-204ENST00000562884 NEXNQ0ZGT2 675 aa11.39□□□□□ -0.59
CYLD-204ENST00000562884 KSR2Q6VAB6 950 aa11.39□□□□□ -0.59
CYLD-204ENST00000562884 RTKN2Q8IZC4 609 aa11.39□□□□□ -0.59
CYLD-204ENST00000562884 CCDC191Q8NCU4 936 aa11.39□□□□□ -0.59
CYLD-204ENST00000562884 CRAMP1Q96RY5 1269 aa11.39□□□□□ -0.59
CYLD-204ENST00000562884 GPBP1L1Q9HC44 474 aaPredicted RBP11.39□□□□□ -0.59
CYLD-204ENST00000562884 RNF181Q9P0P0 153 aa11.39□□□□□ -0.59
CYLD-204ENST00000562884 ZNF521Q96K83 1311 aa11.38□□□□□ -0.59
CYLD-204ENST00000562884 EXOSC9Q06265 439 aaKnown RBP11.38□□□□□ -0.59
CYLD-204ENST00000562884 CCDC93Q567U6 631 aa11.38□□□□□ -0.59
CYLD-204ENST00000562884 METTL22Q9BUU2 404 aaPredicted RBP11.38□□□□□ -0.59
CYLD-204ENST00000562884 TAOK3Q9H2K8 898 aa11.38□□□□□ -0.59
CYLD-204ENST00000562884 LAMB2P55268 1798 aa11.38□□□□□ -0.59
CYLD-204ENST00000562884 ABCC12Q96J65 1359 aa11.38□□□□□ -0.59
CYLD-204ENST00000562884 TNRC6CQ9HCJ0 1690 aaKnown RBP11.37□□□□□ -0.59
CYLD-204ENST00000562884 ATP5J2-PTCD1G3V325 749 aa11.37□□□□□ -0.59
CYLD-204ENST00000562884 C7orf43Q8WVR3 580 aa11.37□□□□□ -0.59
CYLD-204ENST00000562884 ZNF219Q9P2Y4 722 aaPredicted RBP11.37□□□□□ -0.59
CYLD-204ENST00000562884 KDM2BQ8NHM5 1336 aa11.36□□□□□ -0.59
CYLD-204ENST00000562884 PI4KAP2A4QPH2 592 aa11.36□□□□□ -0.59
CYLD-204ENST00000562884 NFKBIEO00221 500 aa11.36□□□□□ -0.59
CYLD-204ENST00000562884 BBOX1O75936 387 aa11.36□□□□□ -0.59
CYLD-204ENST00000562884 POTEHQ6S545 545 aa11.36□□□□□ -0.59
CYLD-204ENST00000562884 DDX46Q7L014 1031 aaKnown RBP11.36□□□□□ -0.59
CYLD-204ENST00000562884 TMC4Q7Z404 712 aa11.36□□□□□ -0.59
CYLD-204ENST00000562884 PI4KAP1Q8N8J0 262 aa11.36□□□□□ -0.59
CYLD-204ENST00000562884 ZBTB38Q8NAP3 1195 aaPredicted RBP11.36□□□□□ -0.59
CYLD-204ENST00000562884 ZNF428Q96B54 188 aa11.36□□□□□ -0.59
CYLD-204ENST00000562884 MYD88Q99836 296 aa11.36□□□□□ -0.59
CYLD-204ENST00000562884 CWC25Q9NXE8 425 aaPredicted RBP11.36□□□□□ -0.59
CYLD-204ENST00000562884 MAP3K2Q9Y2U5 619 aa11.36□□□□□ -0.59
CYLD-204ENST00000562884 MYH3P11055 1940 aa11.36□□□□□ -0.59
CYLD-204ENST00000562884 DDX60Q8IY21 1712 aaKnown RBP11.35□□□□□ -0.59
CYLD-204ENST00000562884 PCCAP05165 728 aaPredicted RBP11.35□□□□□ -0.59
CYLD-204ENST00000562884 HCLS1P14317 486 aaPredicted RBP11.35□□□□□ -0.59
CYLD-204ENST00000562884 FKBP4Q02790 459 aaKnown RBP eCLIP11.35□□□□□ -0.59
CYLD-204ENST00000562884 RASSF7Q02833 373 aa11.35□□□□□ -0.59
CYLD-204ENST00000562884 FLIIQ13045 1269 aa11.35□□□□□ -0.59
CYLD-204ENST00000562884 FKBP5Q13451 457 aaPredicted RBP11.35□□□□□ -0.59
CYLD-204ENST00000562884 DPY19L2Q6NUT2 758 aa11.35□□□□□ -0.59
CYLD-204ENST00000562884 FAM89AQ96GI7 184 aa11.35□□□□□ -0.59
CYLD-204ENST00000562884 SPINK5Q9NQ38 1064 aaPredicted RBP11.35□□□□□ -0.59
CYLD-204ENST00000562884 IRS4O14654 1257 aaPredicted RBP11.34□□□□□ -0.59
CYLD-204ENST00000562884 PPEF1O14829 653 aaPredicted RBP11.34□□□□□ -0.59
CYLD-204ENST00000562884 SLFN5Q08AF3 891 aa11.34□□□□□ -0.59
CYLD-204ENST00000562884 SF3B3Q15393 1217 aaKnown RBP11.34□□□□□ -0.59
CYLD-204ENST00000562884 PSMD1Q99460 953 aa11.34□□□□□ -0.59
CYLD-204ENST00000562884 VPS33BQ9H267 617 aa11.34□□□□□ -0.59
CYLD-204ENST00000562884 TIAM2Q8IVF5 1701 aa11.34□□□□□ -0.59
CYLD-204ENST00000562884 TCERG1O14776 1098 aaKnown RBP11.33□□□□□ -0.6
CYLD-204ENST00000562884 CT47B1P0C2W7 299 aaPredicted RBP11.33□□□□□ -0.6
CYLD-204ENST00000562884 MIER1Q8N108 512 aa11.33□□□□□ -0.6
CYLD-204ENST00000562884 DNAAF4Q8WXU2 420 aa11.33□□□□□ -0.6
CYLD-204ENST00000562884 CDHR2Q9BYE9 1310 aa11.33□□□□□ -0.6
CYLD-204ENST00000562884 TAF1P21675 1872 aa11.32□□□□□ -0.6
CYLD-204ENST00000562884 GLTPD2A6NH11 291 aa11.32□□□□□ -0.6
CYLD-204ENST00000562884 PDE8AO60658 829 aa11.32□□□□□ -0.6
CYLD-204ENST00000562884 GRAPQ13588 217 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms