RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 KLHDC4Q8TBB5 520 aa25.82■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 TMX3Q96JJ7 454 aa25.82■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 DISP2A7MBM2 1401 aa25.81■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 JARID2Q92833 1246 aaPredicted RBP25.8■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 ROBO1Q9Y6N7 1651 aa25.8■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 CUL4AQ13619 759 aa25.79■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 AEBP2Q6ZN18 517 aaPredicted RBP25.79■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 INTS4Q96HW7 963 aaKnown RBP25.79■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 CYP2E1P05181 493 aaPredicted RBP25.79■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.79■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 PLCH1Q4KWH8 1693 aa25.78■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 FOXO4P98177 505 aa25.78■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 TNNI3KQ59H18 835 aa25.78■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 L1TD1Q5T7N2 865 aaKnown RBP25.78■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 LMBR1LQ6UX01 489 aa25.78■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 SNX14Q9Y5W7 946 aa25.78■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 FPGT-TNNI3KV9GXZ4 949 aa25.78■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 LRP6O75581 1613 aa25.77■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 TLR7Q9NYK1 1049 aaKnown RBP25.77■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 STARD3NLO95772 234 aa25.77■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 ATP5JP18859 108 aa25.77■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 PIGBQ92521 554 aa25.77■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 ZBTB3Q9H5J0 574 aa25.77■■□□□ 1.72
VPS9D1-AS1-202ENST00000562866 TJP1Q07157 1748 aa25.76■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 BAG4O95429 457 aaKnown RBP25.76■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 TFCP2Q12800 502 aa25.76■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 ZGPATQ8N5A5 531 aaKnown RBP25.76■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 FSD1Q9BTV5 496 aa25.75■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 BOLA2Q9H3K6 86 aa25.75■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 SNRKQ9NRH2 765 aa25.75■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 KIF6Q6ZMV9 814 aa25.74■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 UPF3BQ9BZI7 483 aaKnown RBP25.74■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 ISCA1Q9BUE6 129 aa25.74■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 ATG3Q9NT62 314 aa25.74■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 CHMP3Q9Y3E7 222 aa25.74■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 RFX7Q2KHR2 1363 aa25.73■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 TRIM28Q13263 835 aaKnown RBP25.73■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 TCIRG1Q13488 830 aa25.73■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 KCNB2Q92953 911 aa25.73■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 ASAP1Q9ULH1 1129 aa25.73■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 COL16A1Q07092 1604 aaPredicted RBP25.73■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 CCDC171Q6TFL3 1326 aa25.73■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 NMIQ13287 307 aaPredicted RBP25.72■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 GPR108Q9NPR9 543 aa25.72■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 DBNLQ9UJU6 430 aaKnown RBP25.72■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 EXOC5O00471 708 aa25.72■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 DNAJC10Q8IXB1 793 aa25.72■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 IL15P40933 162 aaPredicted RBP25.71■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 CDCA7Q9BWT1 371 aaPredicted RBP25.71■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 TM6SF1Q9BZW5 370 aa25.71■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 BCL9O00512 1426 aa25.71■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 ITGB4P16144 1822 aa25.7■■□□□ 1.71
VPS9D1-AS1-202ENST00000562866 PTH1RQ03431 593 aa25.7■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 ZKSCAN1P17029 563 aaPredicted RBP25.69■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 RASEFQ8IZ41 740 aa25.69■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 GZF1Q9H116 711 aaPredicted RBP25.69■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 ISY1Q9ULR0 285 aaKnown RBP25.69■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 GOLGA6L3A6NEY3 463 aa25.69■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 CIAO1O76071 339 aa25.69■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 TTC14Q96N46 770 aa25.69■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 TICAM2Q86XR7 235 aa25.68■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 FAM227BQ96M60 508 aa25.68■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 WNK3Q9BYP7 1800 aa25.68■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 NECTIN1Q15223 517 aa25.67■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 PRPF40BQ6NWY9 871 aaKnown RBP25.67■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 NOL8Q76FK4 1167 aaKnown RBP25.67■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 MAP4K1Q92918 833 aa25.67■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 HAUS7Q99871 368 aa25.67■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 EYA2O00167 538 aa25.67■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 KCNJ4P48050 445 aa25.67■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 RNF20Q5VTR2 975 aa25.67■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 ATG9AQ7Z3C6 839 aa25.67■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 DBNDD2Q9BQY9 259 aa25.67■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 FBXO3Q9UK99 471 aa25.67■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 LIMCH1Q9UPQ0 1083 aa25.67■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 MED23Q9ULK4 1368 aa25.66■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 FSD2A1L4K1 749 aa25.66■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 PCCAP05165 728 aaPredicted RBP25.66■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 HSP90AB3PQ58FF7 597 aa25.66■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 ZNF330Q9Y3S2 320 aaPredicted RBP25.66■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 RBM8AQ9Y5S9 174 aaKnown RBP25.66■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 MAP3K15Q6ZN16 1313 aa25.66■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 PKP1Q13835 747 aa25.65■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 CYP46A1Q9Y6A2 500 aa25.65■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 A0A0D9SFI3 127 aa25.64■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 CASTP20810 708 aaKnown RBP25.64■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 VPS53Q5VIR6 699 aa25.64■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 PLA2G12BQ9BX93 195 aa25.64■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 ZSWIM6Q9HCJ5 1215 aa25.64■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 THRAP3Q9Y2W1 955 aaKnown RBP25.64■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 ZDHHC9Q9Y397 364 aa25.64■■□□□ 1.7
VPS9D1-AS1-202ENST00000562866 PSMA5P28066 241 aa25.64■■□□□ 1.69
VPS9D1-AS1-202ENST00000562866 CREB3L3Q68CJ9 461 aa25.64■■□□□ 1.69
VPS9D1-AS1-202ENST00000562866 MCTP1Q6DN14 999 aa25.64■■□□□ 1.69
VPS9D1-AS1-202ENST00000562866 JAKMIP1Q96N16 626 aaKnown RBP25.64■■□□□ 1.69
VPS9D1-AS1-202ENST00000562866 JCADQ9P266 1359 aa25.63■■□□□ 1.69
VPS9D1-AS1-202ENST00000562866 BRD1O95696 1058 aa25.63■■□□□ 1.69
VPS9D1-AS1-202ENST00000562866 AK2P54819 239 aa25.63■■□□□ 1.69
VPS9D1-AS1-202ENST00000562866 KLHL40Q2TBA0 621 aa25.63■■□□□ 1.69
VPS9D1-AS1-202ENST00000562866 CYP19A1P11511 503 aaPredicted RBP25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms