RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 BCL2L13Q9BXK5 485 aa9.45□□□□□ -0.9
CHD9-205ENST00000562785 GMPR2Q9P2T1 348 aaKnown RBP9.45□□□□□ -0.9
CHD9-205ENST00000562785 FMR1Q06787 632 aaKnown RBP eCLIP9.44□□□□□ -0.9
CHD9-205ENST00000562785 DSC3Q14574 896 aa9.44□□□□□ -0.9
CHD9-205ENST00000562785 TMC1Q8TDI8 760 aa9.44□□□□□ -0.9
CHD9-205ENST00000562785 ZNF428Q96B54 188 aa9.44□□□□□ -0.9
CHD9-205ENST00000562785 EHHADHQ08426 723 aa9.43□□□□□ -0.9
CHD9-205ENST00000562785 FIGNL1Q6PIW4 674 aa9.43□□□□□ -0.9
CHD9-205ENST00000562785 CCDC155Q8N6L0 562 aa9.43□□□□□ -0.9
CHD9-205ENST00000562785 CEP63Q96MT8 703 aa9.43□□□□□ -0.9
CHD9-205ENST00000562785 LCE2BO14633 110 aa9.42□□□□□ -0.9
CHD9-205ENST00000562785 P4HBP07237 508 aaKnown RBP9.42□□□□□ -0.9
CHD9-205ENST00000562785 FAM157BP0CG42 384 aa9.42□□□□□ -0.9
CHD9-205ENST00000562785 EPB42P16452 691 aa9.42□□□□□ -0.9
CHD9-205ENST00000562785 GRNP28799 593 aaKnown RBP9.42□□□□□ -0.9
CHD9-205ENST00000562785 RBM25P49756 843 aaKnown RBP9.42□□□□□ -0.9
CHD9-205ENST00000562785 UBAP2LQ14157 1087 aaKnown RBP9.42□□□□□ -0.9
CHD9-205ENST00000562785 RIPOR1Q6ZS17 1223 aa9.42□□□□□ -0.9
CHD9-205ENST00000562785 RTCBQ9Y3I0 505 aaKnown RBP9.42□□□□□ -0.9
CHD9-205ENST00000562785 KCNMB2Q9Y691 235 aa9.42□□□□□ -0.9
CHD9-205ENST00000562785 H7C1W4 665 aa9.41□□□□□ -0.9
CHD9-205ENST00000562785 SNRPBP14678 240 aaKnown RBP9.41□□□□□ -0.9
CHD9-205ENST00000562785 ZNF16P17020 682 aaPredicted RBP9.41□□□□□ -0.9
CHD9-205ENST00000562785 TRIP4Q15650 581 aaPredicted RBP9.41□□□□□ -0.9
CHD9-205ENST00000562785 EAPPQ56P03 285 aaPredicted RBP9.41□□□□□ -0.9
CHD9-205ENST00000562785 Q6ZNB5 142 aa9.41□□□□□ -0.9
CHD9-205ENST00000562785 TRIM22Q8IYM9 498 aa9.41□□□□□ -0.9
CHD9-205ENST00000562785 GIPC2Q8TF65 315 aa9.41□□□□□ -0.9
CHD9-205ENST00000562785 ZCCHC2Q9C0B9 1178 aaKnown RBP9.41□□□□□ -0.9
CHD9-205ENST00000562785 NUCKS1Q9H1E3 243 aaKnown RBP9.41□□□□□ -0.9
CHD9-205ENST00000562785 GGNBP2Q9H3C7 697 aa9.41□□□□□ -0.9
CHD9-205ENST00000562785 BRD7Q9NPI1 651 aa9.41□□□□□ -0.9
CHD9-205ENST00000562785 CUEDC1Q9NWM3 386 aaPredicted RBP9.41□□□□□ -0.9
CHD9-205ENST00000562785 ATXN7O15265 892 aaPredicted RBP9.4□□□□□ -0.9
CHD9-205ENST00000562785 EFSO43281 561 aa9.4□□□□□ -0.9
CHD9-205ENST00000562785 KCNQ4P56696 695 aa9.4□□□□□ -0.9
CHD9-205ENST00000562785 GMCL1Q96IK5 515 aa9.4□□□□□ -0.9
CHD9-205ENST00000562785 C11orf16Q9NQ32 467 aa9.4□□□□□ -0.9
CHD9-205ENST00000562785 USP20Q9Y2K6 914 aa9.4□□□□□ -0.9
CHD9-205ENST00000562785 PCDHGC4Q9Y5F7 938 aa9.4□□□□□ -0.9
CHD9-205ENST00000562785 MYO15BQ96JP2 1530 aa9.4□□□□□ -0.91
CHD9-205ENST00000562785 ITGA6P23229 1130 aa9.39□□□□□ -0.91
CHD9-205ENST00000562785 PLCB3Q01970 1234 aa9.39□□□□□ -0.91
CHD9-205ENST00000562785 DBN1Q16643 649 aa9.39□□□□□ -0.91
CHD9-205ENST00000562785 C8orf34Q49A92 452 aa9.39□□□□□ -0.91
CHD9-205ENST00000562785 CMTR1Q8N1G2 835 aaKnown RBP9.39□□□□□ -0.91
CHD9-205ENST00000562785 TTC16Q8NEE8 873 aa9.39□□□□□ -0.91
CHD9-205ENST00000562785 FNDC3AQ9Y2H6 1198 aaKnown RBP9.39□□□□□ -0.91
CHD9-205ENST00000562785 A6NHS1 94 aa9.38□□□□□ -0.91
CHD9-205ENST00000562785 EGFRP00533 1210 aa9.38□□□□□ -0.91
CHD9-205ENST00000562785 PDE12Q6L8Q7 609 aaKnown RBP9.38□□□□□ -0.91
CHD9-205ENST00000562785 XKR5Q6UX68 686 aa9.38□□□□□ -0.91
CHD9-205ENST00000562785 ZNF837Q96EG3 531 aaPredicted RBP9.38□□□□□ -0.91
CHD9-205ENST00000562785 NIF3L1Q9GZT8 377 aa9.38□□□□□ -0.91
CHD9-205ENST00000562785 NDFIP2Q9NV92 336 aa9.38□□□□□ -0.91
CHD9-205ENST00000562785 LAMC2Q13753 1193 aa9.37□□□□□ -0.91
CHD9-205ENST00000562785 ZNF326Q5BKZ1 582 aaKnown RBP9.37□□□□□ -0.91
CHD9-205ENST00000562785 DCDC2BA2VCK2 349 aa9.36□□□□□ -0.91
CHD9-205ENST00000562785 UNCXA6NJT0 531 aa9.36□□□□□ -0.91
CHD9-205ENST00000562785 C11orf95C9JLR9 678 aaPredicted RBP9.36□□□□□ -0.91
CHD9-205ENST00000562785 UBAP1LF5GYI3 381 aa9.36□□□□□ -0.91
CHD9-205ENST00000562785 MAPK8P45983 427 aa9.36□□□□□ -0.91
CHD9-205ENST00000562785 TNP2Q05952 138 aa9.36□□□□□ -0.91
CHD9-205ENST00000562785 ENOX2Q16206 610 aaKnown RBP9.36□□□□□ -0.91
CHD9-205ENST00000562785 KCNH4Q9UQ05 1017 aa9.36□□□□□ -0.91
CHD9-205ENST00000562785 ABCC9O60706 1549 aa9.36□□□□□ -0.91
CHD9-205ENST00000562785 KHNYNO15037 678 aaKnown RBP9.35□□□□□ -0.91
CHD9-205ENST00000562785 BNIP3LO60238 219 aa9.35□□□□□ -0.91
CHD9-205ENST00000562785 XYLBO75191 536 aa9.35□□□□□ -0.91
CHD9-205ENST00000562785 NEFLP07196 543 aa9.35□□□□□ -0.91
CHD9-205ENST00000562785 MAPTP10636 758 aaKnown RBP9.35□□□□□ -0.91
CHD9-205ENST00000562785 TAGLNQ01995 201 aaKnown RBP9.35□□□□□ -0.91
CHD9-205ENST00000562785 SFSWAPQ12872 951 aaKnown RBP9.35□□□□□ -0.91
CHD9-205ENST00000562785 ZNF438Q7Z4V0 828 aa9.35□□□□□ -0.91
CHD9-205ENST00000562785 LDHBP07195 334 aaKnown RBP9.34□□□□□ -0.91
CHD9-205ENST00000562785 FGD1P98174 961 aa9.34□□□□□ -0.91
CHD9-205ENST00000562785 SNX29Q8TEQ0 813 aa9.34□□□□□ -0.91
CHD9-205ENST00000562785 CSRNP1Q96S65 589 aa9.34□□□□□ -0.91
CHD9-205ENST00000562785 PNMA6FA0A0J9YX94 578 aa9.33□□□□□ -0.92
CHD9-205ENST00000562785 PPFIA3O75145 1194 aa9.33□□□□□ -0.92
CHD9-205ENST00000562785 PRPF40AO75400 957 aaKnown RBP9.33□□□□□ -0.92
CHD9-205ENST00000562785 TNFRSF21O75509 655 aa9.33□□□□□ -0.92
CHD9-205ENST00000562785 ORC1Q13415 861 aa9.33□□□□□ -0.92
CHD9-205ENST00000562785 DNAJC25Q9H1X3 360 aa9.33□□□□□ -0.92
CHD9-205ENST00000562785 ELP3Q9H9T3 547 aa9.33□□□□□ -0.92
CHD9-205ENST00000562785 STRN4Q9NRL3 753 aa9.33□□□□□ -0.92
CHD9-205ENST00000562785 HCN2Q9UL51 889 aa9.33□□□□□ -0.92
CHD9-205ENST00000562785 ATXN7L1Q9ULK2 861 aaPredicted RBP9.33□□□□□ -0.92
CHD9-205ENST00000562785 E9PSI1 815 aa9.32□□□□□ -0.92
CHD9-205ENST00000562785 EIF1AYO14602 144 aaKnown RBP9.32□□□□□ -0.92
CHD9-205ENST00000562785 RANGAP1P46060 587 aaPredicted RBP9.32□□□□□ -0.92
CHD9-205ENST00000562785 ATP2B2Q01814 1243 aa9.32□□□□□ -0.92
CHD9-205ENST00000562785 GTPBP3Q969Y2 492 aaKnown RBP9.32□□□□□ -0.92
CHD9-205ENST00000562785 ABHD17AQ96GS6 310 aa9.32□□□□□ -0.92
CHD9-205ENST00000562785 TMEM63CQ9P1W3 806 aa9.32□□□□□ -0.92
CHD9-205ENST00000562785 FOXD3Q9UJU5 478 aaPredicted RBP9.32□□□□□ -0.92
CHD9-205ENST00000562785 NACADO15069 1562 aa9.32□□□□□ -0.92
CHD9-205ENST00000562785 CPNE3O75131 537 aaKnown RBP9.31□□□□□ -0.92
CHD9-205ENST00000562785 ALG1LQ6GMV1 187 aa9.31□□□□□ -0.92
CHD9-205ENST00000562785 NLRP13Q86W25 1043 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms