RNA–Protein interactions for RNA: ENST00000562616.1

CCP110-206, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 1,679 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-206ENST00000562616 WNK3Q9BYP7 1800 aa11.72□□□□□ -0.53
CCP110-206ENST00000562616 RBM46Q8TBY0 533 aaKnown RBP11.71□□□□□ -0.53
CCP110-206ENST00000562616 NLRP2Q9NX02 1062 aa11.71□□□□□ -0.53
CCP110-206ENST00000562616 SPATA31A5Q5VU36 1347 aa11.71□□□□□ -0.53
CCP110-206ENST00000562616 SPATA31A7Q8IWB4 1347 aa11.71□□□□□ -0.53
CCP110-206ENST00000562616 ZNF521Q96K83 1311 aa11.71□□□□□ -0.53
CCP110-206ENST00000562616 POM121CA8CG34 1229 aa11.71□□□□□ -0.54
CCP110-206ENST00000562616 SPTLC1O15269 473 aa11.71□□□□□ -0.54
CCP110-206ENST00000562616 SPIRE2Q8WWL2 714 aa11.71□□□□□ -0.54
CCP110-206ENST00000562616 SPATA31A1Q5TZJ5 1347 aa11.7□□□□□ -0.54
CCP110-206ENST00000562616 MAPK8IP3Q9UPT6 1336 aa11.7□□□□□ -0.54
CCP110-206ENST00000562616 MYT1Q01538 1121 aa11.7□□□□□ -0.54
CCP110-206ENST00000562616 KCNC4Q03721 635 aa11.7□□□□□ -0.54
CCP110-206ENST00000562616 DEFB132Q7Z7B7 95 aa11.7□□□□□ -0.54
CCP110-206ENST00000562616 ANKK1Q8NFD2 765 aa11.7□□□□□ -0.54
CCP110-206ENST00000562616 TBC1D2BQ9UPU7 963 aa11.7□□□□□ -0.54
CCP110-206ENST00000562616 E9PSI1 815 aa11.69□□□□□ -0.54
CCP110-206ENST00000562616 NEFMP07197 916 aa11.69□□□□□ -0.54
CCP110-206ENST00000562616 HMOX1P09601 288 aa11.69□□□□□ -0.54
CCP110-206ENST00000562616 PRKAR2BP31323 418 aa11.69□□□□□ -0.54
CCP110-206ENST00000562616 FOSBP53539 338 aa11.69□□□□□ -0.54
CCP110-206ENST00000562616 FAM98CQ17RN3 349 aaKnown RBP11.69□□□□□ -0.54
CCP110-206ENST00000562616 USHBP1Q8N6Y0 703 aa11.69□□□□□ -0.54
CCP110-206ENST00000562616 CCDC27Q2M243 656 aa11.68□□□□□ -0.54
CCP110-206ENST00000562616 NUTM1Q86Y26 1132 aa11.68□□□□□ -0.54
CCP110-206ENST00000562616 RRP7AQ9Y3A4 280 aaKnown RBP11.68□□□□□ -0.54
CCP110-206ENST00000562616 TMPOP42166 694 aaKnown RBP11.68□□□□□ -0.54
CCP110-206ENST00000562616 NYAP1Q6ZVC0 841 aa11.68□□□□□ -0.54
CCP110-206ENST00000562616 CDCA7LQ96GN5 454 aa11.68□□□□□ -0.54
CCP110-206ENST00000562616 CARD10Q9BWT7 1032 aa11.68□□□□□ -0.54
CCP110-206ENST00000562616 THSD7AQ9UPZ6 1657 aa11.68□□□□□ -0.54
CCP110-206ENST00000562616 AP1G2O75843 785 aa11.67□□□□□ -0.54
CCP110-206ENST00000562616 GJA5P36382 358 aa11.67□□□□□ -0.54
CCP110-206ENST00000562616 NBPF6Q5VWK0 638 aa11.67□□□□□ -0.54
CCP110-206ENST00000562616 SULT6B1Q6IMI4 303 aa11.67□□□□□ -0.54
CCP110-206ENST00000562616 RSBN1LQ6PCB5 846 aaPredicted RBP11.67□□□□□ -0.54
CCP110-206ENST00000562616 NBPF4Q96M43 638 aa11.67□□□□□ -0.54
CCP110-206ENST00000562616 RGPD1P0DJD0 1748 aa11.66□□□□□ -0.54
CCP110-206ENST00000562616 BRWD3Q6RI45 1802 aa11.66□□□□□ -0.54
CCP110-206ENST00000562616 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.66□□□□□ -0.54
CCP110-206ENST00000562616 WASHC4Q2M389 1173 aa11.66□□□□□ -0.54
CCP110-206ENST00000562616 TTC13Q8NBP0 860 aa11.66□□□□□ -0.54
CCP110-206ENST00000562616 LRRC37A3O60309 1634 aa11.66□□□□□ -0.54
CCP110-206ENST00000562616 SULF1Q8IWU6 871 aa11.65□□□□□ -0.54
CCP110-206ENST00000562616 SEPT12Q8IYM1 358 aa11.65□□□□□ -0.54
CCP110-206ENST00000562616 PHACTR3Q96KR7 559 aa11.65□□□□□ -0.54
CCP110-206ENST00000562616 EYA1Q99502 592 aa11.65□□□□□ -0.54
CCP110-206ENST00000562616 THRAP3Q9Y2W1 955 aaKnown RBP11.65□□□□□ -0.54
CCP110-206ENST00000562616 IGSF1Q8N6C5 1336 aa11.65□□□□□ -0.54
CCP110-206ENST00000562616 PARP4Q9UKK3 1724 aaKnown RBP11.65□□□□□ -0.54
CCP110-206ENST00000562616 RIPK4P57078 832 aa11.65□□□□□ -0.55
CCP110-206ENST00000562616 SLFN5Q08AF3 891 aa11.65□□□□□ -0.55
CCP110-206ENST00000562616 WDR63Q8IWG1 891 aa11.65□□□□□ -0.55
CCP110-206ENST00000562616 NDUFB9Q9Y6M9 179 aa11.65□□□□□ -0.55
CCP110-206ENST00000562616 DISP2A7MBM2 1401 aa11.64□□□□□ -0.55
CCP110-206ENST00000562616 KDRP35968 1356 aa11.64□□□□□ -0.55
CCP110-206ENST00000562616 CD46P15529 392 aa11.64□□□□□ -0.55
CCP110-206ENST00000562616 NFE2L2Q16236 605 aa11.64□□□□□ -0.55
CCP110-206ENST00000562616 CSPP1Q1MSJ5 1256 aa11.64□□□□□ -0.55
CCP110-206ENST00000562616 C6orf132Q5T0Z8 1188 aa11.64□□□□□ -0.55
CCP110-206ENST00000562616 HDGFL1Q5TGJ6 251 aa11.64□□□□□ -0.55
CCP110-206ENST00000562616 SUPT16HQ9Y5B9 1047 aaKnown RBP11.64□□□□□ -0.55
CCP110-206ENST00000562616 MEGF6O75095 1541 aa11.63□□□□□ -0.55
CCP110-206ENST00000562616 LILRB3O75022 631 aa11.63□□□□□ -0.55
CCP110-206ENST00000562616 USP17L8P0C7I0 530 aa11.63□□□□□ -0.55
CCP110-206ENST00000562616 IL2RBP14784 551 aa11.63□□□□□ -0.55
CCP110-206ENST00000562616 DUSP27Q5VZP5 1158 aa11.63□□□□□ -0.55
CCP110-206ENST00000562616 TRMT2AQ8IZ69 625 aaKnown RBP11.63□□□□□ -0.55
CCP110-206ENST00000562616 ZNF428Q96B54 188 aa11.62□□□□□ -0.55
CCP110-206ENST00000562616 NCAPD2Q15021 1401 aa11.62□□□□□ -0.55
CCP110-206ENST00000562616 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.62□□□□□ -0.55
CCP110-206ENST00000562616 RFX1P22670 979 aa11.62□□□□□ -0.55
CCP110-206ENST00000562616 BCAMP50895 628 aa11.62□□□□□ -0.55
CCP110-206ENST00000562616 ZNF787Q6DD87 383 aa11.62□□□□□ -0.55
CCP110-206ENST00000562616 RAPGEF4Q8WZA2 1011 aa11.62□□□□□ -0.55
CCP110-206ENST00000562616 NRG2O14511 850 aaPredicted RBP11.61□□□□□ -0.55
CCP110-206ENST00000562616 TATP17735 454 aaPredicted RBP11.61□□□□□ -0.55
CCP110-206ENST00000562616 SF3B2Q13435 895 aaKnown RBP11.61□□□□□ -0.55
CCP110-206ENST00000562616 DDB1Q16531 1140 aa11.61□□□□□ -0.55
CCP110-206ENST00000562616 CDCA7Q9BWT1 371 aaPredicted RBP11.61□□□□□ -0.55
CCP110-206ENST00000562616 RABGEF1Q9UJ41 708 aa11.61□□□□□ -0.55
CCP110-206ENST00000562616 SHANK3Q9BYB0 1731 aa11.61□□□□□ -0.55
CCP110-206ENST00000562616 TNS2Q63HR2 1409 aa11.61□□□□□ -0.55
CCP110-206ENST00000562616 SOWAHBA6NEL2 793 aa11.6□□□□□ -0.55
CCP110-206ENST00000562616 NEFLP07196 543 aa11.6□□□□□ -0.55
CCP110-206ENST00000562616 LMOD3Q0VAK6 560 aa11.6□□□□□ -0.55
CCP110-206ENST00000562616 KRT27Q7Z3Y8 459 aa11.6□□□□□ -0.55
CCP110-206ENST00000562616 OVOS2A0A0G2JMS6 1433 aa11.6□□□□□ -0.55
CCP110-206ENST00000562616 PKD1L3Q7Z443 1732 aa11.6□□□□□ -0.55
CCP110-206ENST00000562616 IL16Q14005 1332 aa11.6□□□□□ -0.55
CCP110-206ENST00000562616 MOXD2PA6NHM9 499 aa11.59□□□□□ -0.55
CCP110-206ENST00000562616 EXOC5O00471 708 aa11.59□□□□□ -0.55
CCP110-206ENST00000562616 PRSS12P56730 875 aa11.59□□□□□ -0.55
CCP110-206ENST00000562616 QPCTQ16769 361 aa11.59□□□□□ -0.55
CCP110-206ENST00000562616 FAM182BQ5T319 152 aa11.59□□□□□ -0.55
CCP110-206ENST00000562616 ZDHHC16Q969W1 377 aa11.59□□□□□ -0.55
CCP110-206ENST00000562616 RCAN3Q9UKA8 241 aa11.59□□□□□ -0.55
CCP110-206ENST00000562616 CALD1Q05682 793 aaKnown RBP11.59□□□□□ -0.55
CCP110-206ENST00000562616 PRPF38BQ5VTL8 546 aaKnown RBP11.59□□□□□ -0.55
CCP110-206ENST00000562616 MYH16Q9H6N6 1097 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms