RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 PPP1R42Q7Z4L9 355 aa19.81■□□□□ 0.76
CCNDBP1-203ENST00000562553 ZNF428Q96B54 188 aa19.81■□□□□ 0.76
CCNDBP1-203ENST00000562553 MYH16Q9H6N6 1097 aa19.81■□□□□ 0.76
CCNDBP1-203ENST00000562553 SBF1O95248 1867 aa19.81■□□□□ 0.76
CCNDBP1-203ENST00000562553 LAMB2P55268 1798 aa19.8■□□□□ 0.76
CCNDBP1-203ENST00000562553 RIC1Q4ADV7 1423 aa19.8■□□□□ 0.76
CCNDBP1-203ENST00000562553 VAMP4O75379 141 aa19.8■□□□□ 0.76
CCNDBP1-203ENST00000562553 STYK1Q6J9G0 422 aa19.8■□□□□ 0.76
CCNDBP1-203ENST00000562553 ZNF526Q8TF50 670 aaPredicted RBP19.8■□□□□ 0.76
CCNDBP1-203ENST00000562553 MASTLQ96GX5 879 aa19.8■□□□□ 0.76
CCNDBP1-203ENST00000562553 UTP14AQ9BVJ6 771 aaKnown RBP19.8■□□□□ 0.76
CCNDBP1-203ENST00000562553 ATP5J2-PTCD1G3V325 749 aa19.79■□□□□ 0.76
CCNDBP1-203ENST00000562553 G2E3Q7L622 706 aa19.79■□□□□ 0.76
CCNDBP1-203ENST00000562553 ISCA1Q9BUE6 129 aa19.79■□□□□ 0.76
CCNDBP1-203ENST00000562553 STK31Q9BXU1 1019 aa19.79■□□□□ 0.76
CCNDBP1-203ENST00000562553 CHMP4AQ9BY43 222 aa19.79■□□□□ 0.76
CCNDBP1-203ENST00000562553 KIF3CO14782 793 aa19.78■□□□□ 0.76
CCNDBP1-203ENST00000562553 C3orf67Q6ZVT6 689 aa19.78■□□□□ 0.76
CCNDBP1-203ENST00000562553 RIC3Q7Z5B4 369 aa19.78■□□□□ 0.76
CCNDBP1-203ENST00000562553 SYNE4Q8N205 404 aa19.78■□□□□ 0.76
CCNDBP1-203ENST00000562553 ZNF219Q9P2Y4 722 aaPredicted RBP19.78■□□□□ 0.76
CCNDBP1-203ENST00000562553 DDX60Q8IY21 1712 aaKnown RBP19.78■□□□□ 0.76
CCNDBP1-203ENST00000562553 FER1L6Q2WGJ9 1857 aa19.77■□□□□ 0.76
CCNDBP1-203ENST00000562553 CCDC88AQ3V6T2 1871 aa19.77■□□□□ 0.76
CCNDBP1-203ENST00000562553 NPR1P16066 1061 aa19.77■□□□□ 0.76
CCNDBP1-203ENST00000562553 CRY2Q49AN0 593 aa19.77■□□□□ 0.76
CCNDBP1-203ENST00000562553 PRPF40BQ6NWY9 871 aaKnown RBP19.77■□□□□ 0.76
CCNDBP1-203ENST00000562553 CNKSR1Q969H4 720 aa19.77■□□□□ 0.76
CCNDBP1-203ENST00000562553 C21orf2O43822 256 aa19.76■□□□□ 0.75
CCNDBP1-203ENST00000562553 SLC4A2P04920 1241 aa19.76■□□□□ 0.75
CCNDBP1-203ENST00000562553 RASSF7Q02833 373 aa19.76■□□□□ 0.75
CCNDBP1-203ENST00000562553 TRMT112Q9UI30 125 aaKnown RBP19.76■□□□□ 0.75
CCNDBP1-203ENST00000562553 CDCA7LQ96GN5 454 aa19.75■□□□□ 0.75
CCNDBP1-203ENST00000562553 MYD88Q99836 296 aa19.75■□□□□ 0.75
CCNDBP1-203ENST00000562553 RNF123Q5XPI4 1314 aa19.75■□□□□ 0.75
CCNDBP1-203ENST00000562553 E9PSI1 815 aa19.74■□□□□ 0.75
CCNDBP1-203ENST00000562553 DDX58O95786 925 aaKnown RBP19.74■□□□□ 0.75
CCNDBP1-203ENST00000562553 SLFN5Q08AF3 891 aa19.74■□□□□ 0.75
CCNDBP1-203ENST00000562553 SLC10A5Q5PT55 438 aa19.74■□□□□ 0.75
CCNDBP1-203ENST00000562553 MAP3K2Q9Y2U5 619 aa19.74■□□□□ 0.75
CCNDBP1-203ENST00000562553 SH3TC1Q8TE82 1336 aa19.74■□□□□ 0.75
CCNDBP1-203ENST00000562553 PI4KAP2A4QPH2 592 aa19.73■□□□□ 0.75
CCNDBP1-203ENST00000562553 NFKBIEO00221 500 aa19.73■□□□□ 0.75
CCNDBP1-203ENST00000562553 HCLS1P14317 486 aaPredicted RBP19.73■□□□□ 0.75
CCNDBP1-203ENST00000562553 HSPA6P17066 643 aa19.73■□□□□ 0.75
CCNDBP1-203ENST00000562553 PRELPP51888 382 aa19.73■□□□□ 0.75
CCNDBP1-203ENST00000562553 FLIIQ13045 1269 aa19.73■□□□□ 0.75
CCNDBP1-203ENST00000562553 TRIM28Q13263 835 aaKnown RBP19.73■□□□□ 0.75
CCNDBP1-203ENST00000562553 KSR2Q6VAB6 950 aa19.73■□□□□ 0.75
CCNDBP1-203ENST00000562553 PI4KAP1Q8N8J0 262 aa19.73■□□□□ 0.75
CCNDBP1-203ENST00000562553 METTL22Q9BUU2 404 aaPredicted RBP19.73■□□□□ 0.75
CCNDBP1-203ENST00000562553 TAF1P21675 1872 aa19.72■□□□□ 0.75
CCNDBP1-203ENST00000562553 C9orf131Q5VYM1 1079 aa19.72■□□□□ 0.75
CCNDBP1-203ENST00000562553 C7orf43Q8WVR3 580 aa19.72■□□□□ 0.75
CCNDBP1-203ENST00000562553 FAM89AQ96GI7 184 aa19.72■□□□□ 0.75
CCNDBP1-203ENST00000562553 RTL5Q5HYW3 569 aaPredicted RBP19.71■□□□□ 0.75
CCNDBP1-203ENST00000562553 OLFM4Q6UX06 510 aa19.71■□□□□ 0.75
CCNDBP1-203ENST00000562553 RPGRQ92834 1020 aaKnown RBP19.71■□□□□ 0.75
CCNDBP1-203ENST00000562553 NLRP3Q96P20 1036 aa19.71■□□□□ 0.75
CCNDBP1-203ENST00000562553 HOXA10P31260 410 aaPredicted RBP19.7■□□□□ 0.74
CCNDBP1-203ENST00000562553 SLC51AQ86UW1 340 aa19.7■□□□□ 0.74
CCNDBP1-203ENST00000562553 RNF181Q9P0P0 153 aa19.7■□□□□ 0.74
CCNDBP1-203ENST00000562553 TIAM2Q8IVF5 1701 aa19.7■□□□□ 0.74
CCNDBP1-203ENST00000562553 DICER1Q9UPY3 1922 aaKnown RBP19.69■□□□□ 0.74
CCNDBP1-203ENST00000562553 TOMM70O94826 608 aa19.69■□□□□ 0.74
CCNDBP1-203ENST00000562553 IGKV5-2P06315 115 aa19.69■□□□□ 0.74
CCNDBP1-203ENST00000562553 ALDH1B1P30837 517 aa19.69■□□□□ 0.74
CCNDBP1-203ENST00000562553 FKBP5Q13451 457 aaPredicted RBP19.68■□□□□ 0.74
CCNDBP1-203ENST00000562553 TRMT2AQ8IZ69 625 aaKnown RBP19.68■□□□□ 0.74
CCNDBP1-203ENST00000562553 CCDC191Q8NCU4 936 aa19.68■□□□□ 0.74
CCNDBP1-203ENST00000562553 JARID2Q92833 1246 aaPredicted RBP19.68■□□□□ 0.74
CCNDBP1-203ENST00000562553 RBM17Q96I25 401 aaKnown RBP19.68■□□□□ 0.74
CCNDBP1-203ENST00000562553 CWC25Q9NXE8 425 aaPredicted RBP19.68■□□□□ 0.74
CCNDBP1-203ENST00000562553 CWF19L2Q2TBE0 894 aaKnown RBP19.67■□□□□ 0.74
CCNDBP1-203ENST00000562553 ZBTB38Q8NAP3 1195 aaPredicted RBP19.67■□□□□ 0.74
CCNDBP1-203ENST00000562553 CRAMP1Q96RY5 1269 aa19.67■□□□□ 0.74
CCNDBP1-203ENST00000562553 COL4A1P02462 1669 aa19.67■□□□□ 0.74
CCNDBP1-203ENST00000562553 ABCC4O15439 1325 aa19.67■□□□□ 0.74
CCNDBP1-203ENST00000562553 SNED1Q8TER0 1413 aa19.67■□□□□ 0.74
CCNDBP1-203ENST00000562553 IRS4O14654 1257 aaPredicted RBP19.66■□□□□ 0.74
CCNDBP1-203ENST00000562553 LMNB1P20700 586 aa19.66■□□□□ 0.74
CCNDBP1-203ENST00000562553 CCDC93Q567U6 631 aa19.66■□□□□ 0.74
CCNDBP1-203ENST00000562553 SOGA3Q5TF21 947 aa19.66■□□□□ 0.74
CCNDBP1-203ENST00000562553 NMRK2Q9NPI5 230 aa19.66■□□□□ 0.74
CCNDBP1-203ENST00000562553 ZC3H4Q9UPT8 1303 aaKnown RBP19.66■□□□□ 0.74
CCNDBP1-203ENST00000562553 NEURL1BA8MQ27 555 aa19.65■□□□□ 0.74
CCNDBP1-203ENST00000562553 PCCAP05165 728 aaPredicted RBP19.65■□□□□ 0.74
CCNDBP1-203ENST00000562553 NEXNQ0ZGT2 675 aa19.65■□□□□ 0.74
CCNDBP1-203ENST00000562553 DNAAF4Q8WXU2 420 aa19.65■□□□□ 0.74
CCNDBP1-203ENST00000562553 TAOK3Q9H2K8 898 aa19.65■□□□□ 0.74
CCNDBP1-203ENST00000562553 KDM2BQ8NHM5 1336 aa19.65■□□□□ 0.74
CCNDBP1-203ENST00000562553 LTBP3Q9NS15 1303 aa19.65■□□□□ 0.74
CCNDBP1-203ENST00000562553 MYH3P11055 1940 aa19.64■□□□□ 0.74
CCNDBP1-203ENST00000562553 F6X3S4 739 aa19.64■□□□□ 0.73
CCNDBP1-203ENST00000562553 PPEF1O14829 653 aaPredicted RBP19.64■□□□□ 0.73
CCNDBP1-203ENST00000562553 HNRNPUQ00839 825 aaKnown RBP eCLIP19.63■□□□□ 0.73
CCNDBP1-203ENST00000562553 MRPL50Q8N5N7 158 aaKnown RBP19.63■□□□□ 0.73
CCNDBP1-203ENST00000562553 RBM46Q8TBY0 533 aaKnown RBP19.63■□□□□ 0.73
CCNDBP1-203ENST00000562553 SF3B3Q15393 1217 aaKnown RBP19.62■□□□□ 0.73
CCNDBP1-203ENST00000562553 DDX46Q7L014 1031 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms