RNA–Protein interactions for RNA: ENST00000562373.1

NR4A1-219, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 838 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-219ENST00000562373 OLFM4Q6UX06 510 aa27.24■■□□□ 1.95
NR4A1-219ENST00000562373 NLRP10Q86W26 655 aa27.24■■□□□ 1.95
NR4A1-219ENST00000562373 ATP5J2-PTCD1G3V325 749 aa27.23■■□□□ 1.95
NR4A1-219ENST00000562373 SPINK5Q9NQ38 1064 aaPredicted RBP27.23■■□□□ 1.95
NR4A1-219ENST00000562373 IL16Q14005 1332 aa27.22■■□□□ 1.95
NR4A1-219ENST00000562373 IBTKQ9P2D0 1353 aaPredicted RBP27.22■■□□□ 1.95
NR4A1-219ENST00000562373 CCDC30Q5VVM6 783 aa27.21■■□□□ 1.95
NR4A1-219ENST00000562373 WDR63Q8IWG1 891 aa27.21■■□□□ 1.95
NR4A1-219ENST00000562373 C7orf43Q8WVR3 580 aa27.21■■□□□ 1.95
NR4A1-219ENST00000562373 HCLS1P14317 486 aaPredicted RBP27.2■■□□□ 1.94
NR4A1-219ENST00000562373 LMNB1P20700 586 aa27.2■■□□□ 1.94
NR4A1-219ENST00000562373 TWISTNBQ3B726 338 aaPredicted RBP27.2■■□□□ 1.94
NR4A1-219ENST00000562373 RIC3Q7Z5B4 369 aa27.2■■□□□ 1.94
NR4A1-219ENST00000562373 TRMT112Q9UI30 125 aaKnown RBP27.2■■□□□ 1.94
NR4A1-219ENST00000562373 FANCIQ9NVI1 1328 aa27.19■■□□□ 1.94
NR4A1-219ENST00000562373 CCDC88AQ3V6T2 1871 aa27.19■■□□□ 1.94
NR4A1-219ENST00000562373 CRY2Q49AN0 593 aa27.19■■□□□ 1.94
NR4A1-219ENST00000562373 ISCA1Q9BUE6 129 aa27.19■■□□□ 1.94
NR4A1-219ENST00000562373 ANKRD36CQ5JPF3 1778 aa27.19■■□□□ 1.94
NR4A1-219ENST00000562373 ALDH1B1P30837 517 aa27.18■■□□□ 1.94
NR4A1-219ENST00000562373 C1QTNF8P60827 252 aa27.18■■□□□ 1.94
NR4A1-219ENST00000562373 SLC10A5Q5PT55 438 aa27.18■■□□□ 1.94
NR4A1-219ENST00000562373 SLC51AQ86UW1 340 aa27.18■■□□□ 1.94
NR4A1-219ENST00000562373 RPGRQ92834 1020 aaKnown RBP27.18■■□□□ 1.94
NR4A1-219ENST00000562373 NLRP3Q96P20 1036 aa27.17■■□□□ 1.94
NR4A1-219ENST00000562373 EXOSC9Q06265 439 aaKnown RBP27.16■■□□□ 1.94
NR4A1-219ENST00000562373 GOLGA2Q08379 1002 aa27.16■■□□□ 1.94
NR4A1-219ENST00000562373 RTL5Q5HYW3 569 aaPredicted RBP27.16■■□□□ 1.94
NR4A1-219ENST00000562373 NMRK2Q9NPI5 230 aa27.16■■□□□ 1.94
NR4A1-219ENST00000562373 ARFGEF2Q9Y6D5 1785 aa27.16■■□□□ 1.94
NR4A1-219ENST00000562373 FER1L6Q2WGJ9 1857 aa27.15■■□□□ 1.94
NR4A1-219ENST00000562373 G2E3Q7L622 706 aa27.15■■□□□ 1.94
NR4A1-219ENST00000562373 MYD88Q99836 296 aa27.15■■□□□ 1.94
NR4A1-219ENST00000562373 KIF3CO14782 793 aa27.14■■□□□ 1.94
NR4A1-219ENST00000562373 CCDC93Q567U6 631 aa27.14■■□□□ 1.94
NR4A1-219ENST00000562373 FAM89AQ96GI7 184 aa27.14■■□□□ 1.94
NR4A1-219ENST00000562373 RBM17Q96I25 401 aaKnown RBP27.14■■□□□ 1.94
NR4A1-219ENST00000562373 TAOK3Q9H2K8 898 aa27.14■■□□□ 1.94
NR4A1-219ENST00000562373 HOXA10P31260 410 aaPredicted RBP27.13■■□□□ 1.93
NR4A1-219ENST00000562373 RIC1Q4ADV7 1423 aa27.13■■□□□ 1.93
NR4A1-219ENST00000562373 SH3TC1Q8TE82 1336 aa27.13■■□□□ 1.93
NR4A1-219ENST00000562373 VAMP4O75379 141 aa27.12■■□□□ 1.93
NR4A1-219ENST00000562373 SOGA3Q5TF21 947 aa27.12■■□□□ 1.93
NR4A1-219ENST00000562373 STK31Q9BXU1 1019 aa27.12■■□□□ 1.93
NR4A1-219ENST00000562373 SLC4A2P04920 1241 aa27.11■■□□□ 1.93
NR4A1-219ENST00000562373 JARID2Q92833 1246 aaPredicted RBP27.11■■□□□ 1.93
NR4A1-219ENST00000562373 CRAMP1Q96RY5 1269 aa27.11■■□□□ 1.93
NR4A1-219ENST00000562373 CHMP4AQ9BY43 222 aa27.11■■□□□ 1.93
NR4A1-219ENST00000562373 RRAGCQ9HB90 399 aa27.1■■□□□ 1.93
NR4A1-219ENST00000562373 MAP3K2Q9Y2U5 619 aa27.1■■□□□ 1.93
NR4A1-219ENST00000562373 ZNF277Q9NRM2 450 aaPredicted RBP27.09■■□□□ 1.93
NR4A1-219ENST00000562373 RNF123Q5XPI4 1314 aa27.09■■□□□ 1.93
NR4A1-219ENST00000562373 LTBP3Q9NS15 1303 aa27.09■■□□□ 1.93
NR4A1-219ENST00000562373 PI4KAP2A4QPH2 592 aa27.08■■□□□ 1.93
NR4A1-219ENST00000562373 DDX58O95786 925 aaKnown RBP27.08■■□□□ 1.93
NR4A1-219ENST00000562373 FKBP4Q02790 459 aaKnown RBP eCLIP27.08■■□□□ 1.93
NR4A1-219ENST00000562373 TRIM28Q13263 835 aaKnown RBP27.08■■□□□ 1.93
NR4A1-219ENST00000562373 PI4KAP1Q8N8J0 262 aa27.08■■□□□ 1.93
NR4A1-219ENST00000562373 METTL22Q9BUU2 404 aaPredicted RBP27.08■■□□□ 1.93
NR4A1-219ENST00000562373 PPEF1O14829 653 aaPredicted RBP27.07■■□□□ 1.92
NR4A1-219ENST00000562373 KSR2Q6VAB6 950 aa27.07■■□□□ 1.92
NR4A1-219ENST00000562373 RTKN2Q8IZC4 609 aa27.07■■□□□ 1.92
NR4A1-219ENST00000562373 ABCC4O15439 1325 aa27.07■■□□□ 1.92
NR4A1-219ENST00000562373 LAMB2P55268 1798 aa27.07■■□□□ 1.92
NR4A1-219ENST00000562373 KDM2BQ8NHM5 1336 aa27.06■■□□□ 1.92
NR4A1-219ENST00000562373 ZNF521Q96K83 1311 aa27.06■■□□□ 1.92
NR4A1-219ENST00000562373 CCER2I3L3R5 266 aa27.05■■□□□ 1.92
NR4A1-219ENST00000562373 MYH16Q9H6N6 1097 aa27.05■■□□□ 1.92
NR4A1-219ENST00000562373 GLTPD2A6NH11 291 aa27.04■■□□□ 1.92
NR4A1-219ENST00000562373 IRS4O14654 1257 aaPredicted RBP27.04■■□□□ 1.92
NR4A1-219ENST00000562373 TIAM2Q8IVF5 1701 aa27.04■■□□□ 1.92
NR4A1-219ENST00000562373 TAF1P21675 1872 aa27.04■■□□□ 1.92
NR4A1-219ENST00000562373 DDX46Q7L014 1031 aaKnown RBP27.03■■□□□ 1.92
NR4A1-219ENST00000562373 DDX60Q8IY21 1712 aaKnown RBP27.03■■□□□ 1.92
NR4A1-219ENST00000562373 DICER1Q9UPY3 1922 aaKnown RBP27.02■■□□□ 1.92
NR4A1-219ENST00000562373 ZC3H4Q9UPT8 1303 aaKnown RBP27.02■■□□□ 1.92
NR4A1-219ENST00000562373 IGKV5-2P06315 115 aa27.02■■□□□ 1.92
NR4A1-219ENST00000562373 FLIIQ13045 1269 aa27.02■■□□□ 1.92
NR4A1-219ENST00000562373 ZBTB38Q8NAP3 1195 aaPredicted RBP27.02■■□□□ 1.92
NR4A1-219ENST00000562373 CCDC191Q8NCU4 936 aa27.02■■□□□ 1.92
NR4A1-219ENST00000562373 CWC25Q9NXE8 425 aaPredicted RBP27.02■■□□□ 1.92
NR4A1-219ENST00000562373 SNED1Q8TER0 1413 aa27.01■■□□□ 1.91
NR4A1-219ENST00000562373 IARSP41252 1262 aaKnown RBP27■■□□□ 1.91
NR4A1-219ENST00000562373 CWF19L2Q2TBE0 894 aaKnown RBP27■■□□□ 1.91
NR4A1-219ENST00000562373 ATP6V0A2Q9Y487 856 aa27■■□□□ 1.91
NR4A1-219ENST00000562373 DDNO94850 711 aaPredicted RBP26.99■■□□□ 1.91
NR4A1-219ENST00000562373 PCCAP05165 728 aaPredicted RBP26.99■■□□□ 1.91
NR4A1-219ENST00000562373 FKBP5Q13451 457 aaPredicted RBP26.99■■□□□ 1.91
NR4A1-219ENST00000562373 GRAPQ13588 217 aa26.99■■□□□ 1.91
NR4A1-219ENST00000562373 SF3B3Q15393 1217 aaKnown RBP26.99■■□□□ 1.91
NR4A1-219ENST00000562373 DIEXFQ68CQ4 756 aaKnown RBP26.99■■□□□ 1.91
NR4A1-219ENST00000562373 CC2D2BQ6DHV5 1058 aa26.99■■□□□ 1.91
NR4A1-219ENST00000562373 DPY19L2Q6NUT2 758 aa26.99■■□□□ 1.91
NR4A1-219ENST00000562373 MIER1Q8N108 512 aa26.99■■□□□ 1.91
NR4A1-219ENST00000562373 GRAPLQ8TC17 118 aaPredicted RBP26.99■■□□□ 1.91
NR4A1-219ENST00000562373 BBOX1O75936 387 aa26.98■■□□□ 1.91
NR4A1-219ENST00000562373 CELF1Q92879 486 aaKnown RBP26.98■■□□□ 1.91
NR4A1-219ENST00000562373 CDCA7LQ96GN5 454 aa26.98■■□□□ 1.91
NR4A1-219ENST00000562373 PSMD1Q99460 953 aa26.98■■□□□ 1.91
NR4A1-219ENST00000562373 POTECB2RU33 542 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms