RNA–Protein interactions for RNA: ENST00000562237.5

UTP4-203, Transcript of UTP4, small subunit processome component, humanhuman

TSL 1 (best)

Gene UTP4, Length 2,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4-203ENST00000562237 EAF2Q96CJ1 260 aaPredicted RBP23.53■■□□□ 1.36
UTP4-203ENST00000562237 UQCRHLA0A096LP55 91 aa23.52■■□□□ 1.36
UTP4-203ENST00000562237 UQCRHP07919 91 aa23.52■■□□□ 1.36
UTP4-203ENST00000562237 DDX21Q9NR30 783 aaKnown RBP eCLIP23.52■■□□□ 1.36
UTP4-203ENST00000562237 MRC1P22897 1456 aa23.52■■□□□ 1.36
UTP4-203ENST00000562237 ADCY5O95622 1261 aa23.51■■□□□ 1.35
UTP4-203ENST00000562237 NMIQ13287 307 aaPredicted RBP23.51■■□□□ 1.35
UTP4-203ENST00000562237 ESCO1Q5FWF5 840 aa23.51■■□□□ 1.35
UTP4-203ENST00000562237 ALDH8A1Q9H2A2 487 aaPredicted RBP23.51■■□□□ 1.35
UTP4-203ENST00000562237 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.51■■□□□ 1.35
UTP4-203ENST00000562237 PRAMEF22A3QJZ6 481 aa23.51■■□□□ 1.35
UTP4-203ENST00000562237 KDM4AO75164 1064 aa23.51■■□□□ 1.35
UTP4-203ENST00000562237 DDX58O95786 925 aaKnown RBP23.51■■□□□ 1.35
UTP4-203ENST00000562237 GCP02774 474 aa23.51■■□□□ 1.35
UTP4-203ENST00000562237 PSMA5P28066 241 aa23.51■■□□□ 1.35
UTP4-203ENST00000562237 G3BP1Q13283 466 aaKnown RBP eCLIP23.51■■□□□ 1.35
UTP4-203ENST00000562237 FAM227BQ96M60 508 aa23.51■■□□□ 1.35
UTP4-203ENST00000562237 BICC1Q9H694 974 aaKnown RBP23.51■■□□□ 1.35
UTP4-203ENST00000562237 TPCN1Q9ULQ1 816 aa23.51■■□□□ 1.35
UTP4-203ENST00000562237 JCADQ9P266 1359 aa23.5■■□□□ 1.35
UTP4-203ENST00000562237 ZBTB7CA1YPR0 619 aa23.5■■□□□ 1.35
UTP4-203ENST00000562237 DYNC1I1O14576 645 aa23.5■■□□□ 1.35
UTP4-203ENST00000562237 SLC27A2O14975 620 aa23.5■■□□□ 1.35
UTP4-203ENST00000562237 PDIA6Q15084 440 aa23.5■■□□□ 1.35
UTP4-203ENST00000562237 PIBF1Q8WXW3 757 aa23.5■■□□□ 1.35
UTP4-203ENST00000562237 MED23Q9ULK4 1368 aa23.49■■□□□ 1.35
UTP4-203ENST00000562237 NPHP4O75161 1426 aaPredicted RBP23.49■■□□□ 1.35
UTP4-203ENST00000562237 MAP7D2Q96T17 732 aa23.49■■□□□ 1.35
UTP4-203ENST00000562237 ANKRD24Q8TF21 1146 aa23.48■■□□□ 1.35
UTP4-203ENST00000562237 GIMAP6Q6P9H5 292 aa23.47■■□□□ 1.35
UTP4-203ENST00000562237 NECAB1Q8N987 351 aa23.47■■□□□ 1.35
UTP4-203ENST00000562237 CCDC8Q9H0W5 538 aaPredicted RBP23.47■■□□□ 1.35
UTP4-203ENST00000562237 ELP1O95163 1332 aa23.47■■□□□ 1.35
UTP4-203ENST00000562237 ANKRD1Q15327 319 aa23.47■■□□□ 1.35
UTP4-203ENST00000562237 TSGA10IPQ3SY00 556 aa23.47■■□□□ 1.35
UTP4-203ENST00000562237 A0A0D9SFI3 127 aa23.46■■□□□ 1.35
UTP4-203ENST00000562237 VPS37CA5D8V6 355 aaPredicted RBP23.46■■□□□ 1.35
UTP4-203ENST00000562237 IGKV5-2P06315 115 aa23.46■■□□□ 1.35
UTP4-203ENST00000562237 KCNJ4P48050 445 aa23.46■■□□□ 1.35
UTP4-203ENST00000562237 RNF20Q5VTR2 975 aa23.46■■□□□ 1.35
UTP4-203ENST00000562237 LARP1BQ659C4 914 aaKnown RBP23.46■■□□□ 1.35
UTP4-203ENST00000562237 TLR7Q9NYK1 1049 aaKnown RBP23.46■■□□□ 1.35
UTP4-203ENST00000562237 PDCP20941 246 aa23.45■■□□□ 1.35
UTP4-203ENST00000562237 ANKLE2Q86XL3 938 aa23.45■■□□□ 1.35
UTP4-203ENST00000562237 C5P01031 1676 aa23.45■■□□□ 1.35
UTP4-203ENST00000562237 DDX54Q8TDD1 881 aaKnown RBP23.45■■□□□ 1.34
UTP4-203ENST00000562237 RPS6KB1P23443 525 aa23.44■■□□□ 1.34
UTP4-203ENST00000562237 KRT85P78386 507 aa23.44■■□□□ 1.34
UTP4-203ENST00000562237 RBM10P98175 930 aaKnown RBP23.44■■□□□ 1.34
UTP4-203ENST00000562237 LARP1Q6PKG0 1096 aaKnown RBP23.44■■□□□ 1.34
UTP4-203ENST00000562237 BLOC1S2Q6QNY1 142 aa23.44■■□□□ 1.34
UTP4-203ENST00000562237 RBM33Q96EV2 1170 aaKnown RBP23.44■■□□□ 1.34
UTP4-203ENST00000562237 TRPM3Q9HCF6 1732 aaPredicted RBP23.44■■□□□ 1.34
UTP4-203ENST00000562237 SCN11AQ9UI33 1791 aa23.44■■□□□ 1.34
UTP4-203ENST00000562237 TTC6Q86TZ1 520 aa23.44■■□□□ 1.34
UTP4-203ENST00000562237 FSD1Q9BTV5 496 aa23.44■■□□□ 1.34
UTP4-203ENST00000562237 HMG20BQ9P0W2 317 aa23.44■■□□□ 1.34
UTP4-203ENST00000562237 ZNF142P52746 1687 aaPredicted RBP23.43■■□□□ 1.34
UTP4-203ENST00000562237 COL9A3Q14050 684 aaPredicted RBP23.43■■□□□ 1.34
UTP4-203ENST00000562237 NOLC1Q14978 699 aaKnown RBP eCLIP23.43■■□□□ 1.34
UTP4-203ENST00000562237 BOLA2Q9H3K6 86 aa23.43■■□□□ 1.34
UTP4-203ENST00000562237 SPTLC3Q9NUV7 552 aa23.43■■□□□ 1.34
UTP4-203ENST00000562237 ZNF830Q96NB3 372 aaPredicted RBP23.42■■□□□ 1.34
UTP4-203ENST00000562237 NEURL1BA8MQ27 555 aa23.42■■□□□ 1.34
UTP4-203ENST00000562237 DTNBO60941 627 aa23.42■■□□□ 1.34
UTP4-203ENST00000562237 TOB2Q14106 344 aaPredicted RBP23.42■■□□□ 1.34
UTP4-203ENST00000562237 TPRNQ4KMQ1 711 aa23.42■■□□□ 1.34
UTP4-203ENST00000562237 CDC37L1Q7L3B6 337 aa23.42■■□□□ 1.34
UTP4-203ENST00000562237 RGPD5Q99666 1765 aa23.42■■□□□ 1.34
UTP4-203ENST00000562237 CCDC192P0DO97 292 aa23.41■■□□□ 1.34
UTP4-203ENST00000562237 AIMP1Q12904 312 aaKnown RBP23.41■■□□□ 1.34
UTP4-203ENST00000562237 USPL1Q5W0Q7 1092 aa23.41■■□□□ 1.34
UTP4-203ENST00000562237 MTERF4Q7Z6M4 381 aaKnown RBP23.41■■□□□ 1.34
UTP4-203ENST00000562237 TTC12Q9H892 705 aaPredicted RBP23.41■■□□□ 1.34
UTP4-203ENST00000562237 FAM13BQ9NYF5 915 aa23.41■■□□□ 1.34
UTP4-203ENST00000562237 AP5Z1O43299 807 aa23.41■■□□□ 1.34
UTP4-203ENST00000562237 RIC3Q7Z5B4 369 aa23.41■■□□□ 1.34
UTP4-203ENST00000562237 AXIN2Q9Y2T1 843 aa23.41■■□□□ 1.34
UTP4-203ENST00000562237 GCKRQ14397 625 aa23.4■■□□□ 1.34
UTP4-203ENST00000562237 ZNF790Q6PG37 636 aa23.4■■□□□ 1.34
UTP4-203ENST00000562237 MYRIPQ8NFW9 859 aa23.4■■□□□ 1.34
UTP4-203ENST00000562237 PRIMPOLQ96LW4 560 aa23.4■■□□□ 1.34
UTP4-203ENST00000562237 TAF5LO75529 589 aa23.4■■□□□ 1.34
UTP4-203ENST00000562237 NEXNQ0ZGT2 675 aa23.4■■□□□ 1.34
UTP4-203ENST00000562237 SIL1Q9H173 461 aa23.4■■□□□ 1.34
UTP4-203ENST00000562237 TAF6LQ9Y6J9 622 aa23.4■■□□□ 1.34
UTP4-203ENST00000562237 RFX7Q2KHR2 1363 aa23.39■■□□□ 1.33
UTP4-203ENST00000562237 TPM3P06753 285 aa23.39■■□□□ 1.33
UTP4-203ENST00000562237 ZNF589Q86UQ0 364 aaPredicted RBP23.39■■□□□ 1.33
UTP4-203ENST00000562237 MPNDQ8N594 471 aa23.39■■□□□ 1.33
UTP4-203ENST00000562237 METTL22Q9BUU2 404 aaPredicted RBP23.39■■□□□ 1.33
UTP4-203ENST00000562237 COPRSQ9NQ92 184 aa23.39■■□□□ 1.33
UTP4-203ENST00000562237 ORAI2Q96SN7 254 aa23.38■■□□□ 1.33
UTP4-203ENST00000562237 SCAND2PQ9GZW5 306 aaPredicted RBP23.38■■□□□ 1.33
UTP4-203ENST00000562237 ATP5JP18859 108 aa23.38■■□□□ 1.33
UTP4-203ENST00000562237 EPHA10Q5JZY3 1008 aa23.38■■□□□ 1.33
UTP4-203ENST00000562237 COL15A1P39059 1388 aa23.37■■□□□ 1.33
UTP4-203ENST00000562237 KLHDC4Q8TBB5 520 aa23.37■■□□□ 1.33
UTP4-203ENST00000562237 NUP62CLQ9H1M0 184 aa23.37■■□□□ 1.33
UTP4-203ENST00000562237 MST1RQ04912 1400 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms