RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 FHDC1Q9C0D6 1143 aaPredicted RBP8.96□□□□□ -0.98
UBR1-203ENST00000562173 ZNF395Q9H8N7 513 aaPredicted RBP8.96□□□□□ -0.98
UBR1-203ENST00000562173 POLMQ9NP87 494 aaPredicted RBP8.96□□□□□ -0.98
UBR1-203ENST00000562173 A2ML1A8K2U0 1454 aa8.96□□□□□ -0.98
UBR1-203ENST00000562173 A2MP01023 1474 aa8.96□□□□□ -0.98
UBR1-203ENST00000562173 GPATCH8Q9UKJ3 1502 aaKnown RBP8.95□□□□□ -0.98
UBR1-203ENST00000562173 IQGAP1P46940 1657 aa8.95□□□□□ -0.98
UBR1-203ENST00000562173 TTLL8A6PVC2 850 aa8.95□□□□□ -0.98
UBR1-203ENST00000562173 MAN1A2O60476 641 aa8.95□□□□□ -0.98
UBR1-203ENST00000562173 GTF2E1P29083 439 aaPredicted RBP8.95□□□□□ -0.98
UBR1-203ENST00000562173 SMTNP53814 917 aa8.95□□□□□ -0.98
UBR1-203ENST00000562173 FOXD4L5Q5VV16 416 aaPredicted RBP8.95□□□□□ -0.98
UBR1-203ENST00000562173 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.95□□□□□ -0.98
UBR1-203ENST00000562173 RNF217Q8TC41 542 aa8.95□□□□□ -0.98
UBR1-203ENST00000562173 SLC16A10Q8TF71 515 aa8.95□□□□□ -0.98
UBR1-203ENST00000562173 STK32AQ8WU08 396 aa8.95□□□□□ -0.98
UBR1-203ENST00000562173 DNMT3LQ9UJW3 386 aa8.95□□□□□ -0.98
UBR1-203ENST00000562173 ERBB4Q15303 1308 aa8.95□□□□□ -0.98
UBR1-203ENST00000562173 LRRC7Q96NW7 1537 aa8.95□□□□□ -0.98
UBR1-203ENST00000562173 A6NJY4 79 aa8.94□□□□□ -0.98
UBR1-203ENST00000562173 TMEM164Q5U3C3 297 aa8.94□□□□□ -0.98
UBR1-203ENST00000562173 CNTLNQ9NXG0 1405 aa8.94□□□□□ -0.98
UBR1-203ENST00000562173 CEP152O94986 1710 aa8.94□□□□□ -0.98
UBR1-203ENST00000562173 SFI1A8K8P3 1242 aa8.93□□□□□ -0.98
UBR1-203ENST00000562173 SPATA31C2B4DYI2 1134 aa8.93□□□□□ -0.98
UBR1-203ENST00000562173 CTSOP43234 321 aaPredicted RBP8.93□□□□□ -0.98
UBR1-203ENST00000562173 CENPCQ03188 943 aa8.93□□□□□ -0.98
UBR1-203ENST00000562173 WDR44Q5JSH3 913 aa8.93□□□□□ -0.98
UBR1-203ENST00000562173 CLP1Q92989 425 aaKnown RBP8.93□□□□□ -0.98
UBR1-203ENST00000562173 ZSCAN10Q96SZ4 725 aaPredicted RBP8.93□□□□□ -0.98
UBR1-203ENST00000562173 GRIP2Q9C0E4 1043 aa8.93□□□□□ -0.98
UBR1-203ENST00000562173 SCHIP1Q9P0W5 487 aaPredicted RBP8.93□□□□□ -0.98
UBR1-203ENST00000562173 SPAG9O60271 1321 aaKnown RBP8.92□□□□□ -0.98
UBR1-203ENST00000562173 CDK2AP1O14519 115 aa8.92□□□□□ -0.98
UBR1-203ENST00000562173 STAU1O95793 577 aaKnown RBP8.92□□□□□ -0.98
UBR1-203ENST00000562173 GMPRP36959 345 aa8.92□□□□□ -0.98
UBR1-203ENST00000562173 FOXK2Q01167 660 aa8.92□□□□□ -0.98
UBR1-203ENST00000562173 SLC27A3Q5K4L6 730 aa8.92□□□□□ -0.98
UBR1-203ENST00000562173 PPARGC1BQ86YN6 1023 aaKnown RBP8.92□□□□□ -0.98
UBR1-203ENST00000562173 RETREG2Q8NC44 543 aa8.92□□□□□ -0.98
UBR1-203ENST00000562173 GAS2L2Q8NHY3 880 aa8.92□□□□□ -0.98
UBR1-203ENST00000562173 SERTAD1Q9UHV2 236 aa8.92□□□□□ -0.98
UBR1-203ENST00000562173 RNF17Q9BXT8 1623 aaKnown RBP8.91□□□□□ -0.98
UBR1-203ENST00000562173 TIAM1Q13009 1591 aa8.91□□□□□ -0.98
UBR1-203ENST00000562173 CPS1P31327 1500 aa8.91□□□□□ -0.98
UBR1-203ENST00000562173 CLIP1P30622 1438 aa8.91□□□□□ -0.98
UBR1-203ENST00000562173 FMN1Q68DA7 1419 aa8.91□□□□□ -0.98
UBR1-203ENST00000562173 TMEM88BA6NKF7 163 aa8.91□□□□□ -0.98
UBR1-203ENST00000562173 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.91□□□□□ -0.98
UBR1-203ENST00000562173 GNASQ5JWF2 1037 aa8.91□□□□□ -0.98
UBR1-203ENST00000562173 B4GALNT3Q6L9W6 998 aa8.91□□□□□ -0.98
UBR1-203ENST00000562173 TSEN2Q8NCE0 465 aaKnown RBP8.91□□□□□ -0.98
UBR1-203ENST00000562173 RHBDD1Q8TEB9 315 aa8.91□□□□□ -0.98
UBR1-203ENST00000562173 IRF7Q92985 503 aa8.91□□□□□ -0.98
UBR1-203ENST00000562173 IQSEC3Q9UPP2 1182 aaPredicted RBP8.91□□□□□ -0.98
UBR1-203ENST00000562173 LYSMD3Q7Z3D4 306 aa8.9□□□□□ -0.98
UBR1-203ENST00000562173 STAG2Q8N3U4 1231 aa8.9□□□□□ -0.98
UBR1-203ENST00000562173 NPHP4O75161 1426 aaPredicted RBP8.89□□□□□ -0.99
UBR1-203ENST00000562173 TNRQ92752 1358 aa8.89□□□□□ -0.99
UBR1-203ENST00000562173 UBR1Q8IWV7 1749 aa8.89□□□□□ -0.99
UBR1-203ENST00000562173 VSIG8P0DPA2 414 aa8.89□□□□□ -0.99
UBR1-203ENST00000562173 IGFBP4P22692 258 aa8.89□□□□□ -0.99
UBR1-203ENST00000562173 PSMA6P60900 246 aaKnown RBP8.89□□□□□ -0.99
UBR1-203ENST00000562173 TMEM214Q6NUQ4 689 aaKnown RBP8.89□□□□□ -0.99
UBR1-203ENST00000562173 ZNF295-AS1Q8N0V1 137 aa8.89□□□□□ -0.99
UBR1-203ENST00000562173 ROBO1Q9Y6N7 1651 aa8.88□□□□□ -0.99
UBR1-203ENST00000562173 TOM1O60784 492 aa8.88□□□□□ -0.99
UBR1-203ENST00000562173 PPFIA3O75145 1194 aa8.88□□□□□ -0.99
UBR1-203ENST00000562173 WEE1P30291 646 aa8.88□□□□□ -0.99
UBR1-203ENST00000562173 HIRAP54198 1017 aaPredicted RBP8.88□□□□□ -0.99
UBR1-203ENST00000562173 INSM1Q01101 510 aaPredicted RBP8.88□□□□□ -0.99
UBR1-203ENST00000562173 TAS1R3Q7RTX0 852 aa8.88□□□□□ -0.99
UBR1-203ENST00000562173 SLC9A9Q8IVB4 645 aa8.88□□□□□ -0.99
UBR1-203ENST00000562173 TNS4Q8IZW8 715 aa8.88□□□□□ -0.99
UBR1-203ENST00000562173 NIFKQ9BYG3 293 aaKnown RBP8.88□□□□□ -0.99
UBR1-203ENST00000562173 CHMP3Q9Y3E7 222 aa8.88□□□□□ -0.99
UBR1-203ENST00000562173 CASKIN1Q8WXD9 1431 aa8.88□□□□□ -0.99
UBR1-203ENST00000562173 FIGNL2A6NMB9 653 aa8.87□□□□□ -0.99
UBR1-203ENST00000562173 FOXO3O43524 673 aa8.87□□□□□ -0.99
UBR1-203ENST00000562173 LORP23490 312 aaPredicted RBP8.87□□□□□ -0.99
UBR1-203ENST00000562173 HINFPQ9BQA5 517 aa8.87□□□□□ -0.99
UBR1-203ENST00000562173 MBD5Q9P267 1494 aa8.87□□□□□ -0.99
UBR1-203ENST00000562173 DEPDC5O75140 1603 aa8.87□□□□□ -0.99
UBR1-203ENST00000562173 MROH1Q8NDA8 1641 aa8.87□□□□□ -0.99
UBR1-203ENST00000562173 UGGT1Q9NYU2 1555 aa8.86□□□□□ -0.99
UBR1-203ENST00000562173 OCLNQ16625 522 aa8.86□□□□□ -0.99
UBR1-203ENST00000562173 NBPF10Q6P3W6 841 aaKnown RBP8.86□□□□□ -0.99
UBR1-203ENST00000562173 C1orf216Q8TAB5 229 aa8.86□□□□□ -0.99
UBR1-203ENST00000562173 TSPAN10Q9H1Z9 355 aaPredicted RBP8.86□□□□□ -0.99
UBR1-203ENST00000562173 MYO5BQ9ULV0 1848 aa8.86□□□□□ -0.99
UBR1-203ENST00000562173 SYNMO15061 1565 aa8.86□□□□□ -0.99
UBR1-203ENST00000562173 PZPP20742 1482 aa8.85□□□□□ -0.99
UBR1-203ENST00000562173 NCOA2Q15596 1464 aa8.85□□□□□ -0.99
UBR1-203ENST00000562173 LRP6O75581 1613 aa8.85□□□□□ -0.99
UBR1-203ENST00000562173 PTSQ03393 145 aa8.85□□□□□ -0.99
UBR1-203ENST00000562173 TEAD4Q15561 434 aa8.85□□□□□ -0.99
UBR1-203ENST00000562173 GPC6Q9Y625 555 aaPredicted RBP8.85□□□□□ -0.99
UBR1-203ENST00000562173 EEA1Q15075 1411 aa8.85□□□□□ -0.99
UBR1-203ENST00000562173 KDM5DQ9BY66 1539 aa8.85□□□□□ -0.99
UBR1-203ENST00000562173 MED14O60244 1454 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms