RNA–Protein interactions for RNA: ENST00000562065.1

LINC01243-201, Transcript of long intergenic non-protein coding RNA 1243, humanhuman

TSL 1 (best) BASIC

Gene LINC01243, Length 721 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01243-201ENST00000562065 CHRNA4P43681 627 aa10.75□□□□□ -0.69
LINC01243-201ENST00000562065 ZNF280CQ8ND82 737 aa10.75□□□□□ -0.69
LINC01243-201ENST00000562065 SCG3Q8WXD2 468 aaKnown RBP10.75□□□□□ -0.69
LINC01243-201ENST00000562065 MAFBQ9Y5Q3 323 aaPredicted RBP10.75□□□□□ -0.69
LINC01243-201ENST00000562065 HIRAP54198 1017 aaPredicted RBP10.74□□□□□ -0.69
LINC01243-201ENST00000562065 SEC13P55735 322 aa10.74□□□□□ -0.69
LINC01243-201ENST00000562065 LARP1Q6PKG0 1096 aaKnown RBP10.74□□□□□ -0.69
LINC01243-201ENST00000562065 SUSD3Q96L08 255 aa10.74□□□□□ -0.69
LINC01243-201ENST00000562065 LGR5O75473 907 aa10.73□□□□□ -0.69
LINC01243-201ENST00000562065 TYRO3Q06418 890 aa10.73□□□□□ -0.69
LINC01243-201ENST00000562065 TBC1D8BQ0IIM8 1120 aa10.73□□□□□ -0.69
LINC01243-201ENST00000562065 ALDH16A1Q8IZ83 802 aa10.73□□□□□ -0.69
LINC01243-201ENST00000562065 CALR3Q96L12 384 aaKnown RBP10.73□□□□□ -0.69
LINC01243-201ENST00000562065 HINFPQ9BQA5 517 aa10.73□□□□□ -0.69
LINC01243-201ENST00000562065 KCNH4Q9UQ05 1017 aa10.73□□□□□ -0.69
LINC01243-201ENST00000562065 ATAD2Q6PL18 1390 aa10.73□□□□□ -0.69
LINC01243-201ENST00000562065 C21orf2O43822 256 aa10.72□□□□□ -0.69
LINC01243-201ENST00000562065 TMEM132AQ24JP5 1023 aa10.72□□□□□ -0.69
LINC01243-201ENST00000562065 FNBP4Q8N3X1 1017 aaPredicted RBP10.72□□□□□ -0.69
LINC01243-201ENST00000562065 M0R082 166 aa10.71□□□□□ -0.69
LINC01243-201ENST00000562065 DKK1O94907 266 aa10.71□□□□□ -0.69
LINC01243-201ENST00000562065 ADH7P40394 386 aa10.71□□□□□ -0.69
LINC01243-201ENST00000562065 ZNF417Q8TAU3 575 aa10.71□□□□□ -0.69
LINC01243-201ENST00000562065 BHMTQ93088 406 aa10.71□□□□□ -0.69
LINC01243-201ENST00000562065 ZNF587Q96SQ5 575 aaPredicted RBP10.71□□□□□ -0.69
LINC01243-201ENST00000562065 SPDYE3A6NKU9 549 aa10.7□□□□□ -0.7
LINC01243-201ENST00000562065 ADARB2-AS1A8MUL3 147 aa10.7□□□□□ -0.7
LINC01243-201ENST00000562065 SPATA31C1P0DKV0 1188 aa10.7□□□□□ -0.7
LINC01243-201ENST00000562065 PRRT3Q5FWE3 981 aa10.7□□□□□ -0.7
LINC01243-201ENST00000562065 POTEAQ6S8J7 498 aa10.69□□□□□ -0.7
LINC01243-201ENST00000562065 TNFRSF25Q93038 417 aa10.69□□□□□ -0.7
LINC01243-201ENST00000562065 C2orf49Q9BVC5 232 aaPredicted RBP10.69□□□□□ -0.7
LINC01243-201ENST00000562065 IGFLR1Q9H665 355 aa10.69□□□□□ -0.7
LINC01243-201ENST00000562065 ALBP02768 609 aa10.68□□□□□ -0.7
LINC01243-201ENST00000562065 DPYDQ12882 1025 aa10.68□□□□□ -0.7
LINC01243-201ENST00000562065 HIF1AQ16665 826 aa10.68□□□□□ -0.7
LINC01243-201ENST00000562065 CRTC2Q53ET0 693 aaPredicted RBP10.68□□□□□ -0.7
LINC01243-201ENST00000562065 C8orf86Q6ZUL3 223 aa10.68□□□□□ -0.7
LINC01243-201ENST00000562065 MDFIQ99750 246 aa10.68□□□□□ -0.7
LINC01243-201ENST00000562065 PPP1R12CQ9BZL4 782 aa10.68□□□□□ -0.7
LINC01243-201ENST00000562065 FAM229AH3BQW9 127 aa10.67□□□□□ -0.7
LINC01243-201ENST00000562065 BTLAQ7Z6A9 289 aa10.67□□□□□ -0.7
LINC01243-201ENST00000562065 GAS2L2Q8NHY3 880 aa10.67□□□□□ -0.7
LINC01243-201ENST00000562065 UBE2OQ9C0C9 1292 aaKnown RBP10.67□□□□□ -0.7
LINC01243-201ENST00000562065 EIF4G3O43432 1585 aaKnown RBP10.67□□□□□ -0.7
LINC01243-201ENST00000562065 KCNQ4P56696 695 aa10.66□□□□□ -0.7
LINC01243-201ENST00000562065 DOC2BQ14184 412 aa10.66□□□□□ -0.7
LINC01243-201ENST00000562065 STAG2Q8N3U4 1231 aa10.66□□□□□ -0.7
LINC01243-201ENST00000562065 APBA3O96018 575 aa10.65□□□□□ -0.7
LINC01243-201ENST00000562065 LMOD1P29536 600 aaPredicted RBP10.65□□□□□ -0.7
LINC01243-201ENST00000562065 GATA4P43694 442 aa10.65□□□□□ -0.7
LINC01243-201ENST00000562065 MICALL1Q8N3F8 863 aa10.65□□□□□ -0.7
LINC01243-201ENST00000562065 STARD13Q9Y3M8 1113 aa10.65□□□□□ -0.7
LINC01243-201ENST00000562065 USP17L15C9J2P7 530 aa10.64□□□□□ -0.71
LINC01243-201ENST00000562065 USP17L10C9JJH3 530 aa10.64□□□□□ -0.71
LINC01243-201ENST00000562065 USP17L13C9JLJ4 530 aa10.64□□□□□ -0.71
LINC01243-201ENST00000562065 USP17L12C9JPN9 530 aa10.64□□□□□ -0.71
LINC01243-201ENST00000562065 USP17L11C9JVI0 530 aa10.64□□□□□ -0.71
LINC01243-201ENST00000562065 USP17L21D6R901 530 aa10.64□□□□□ -0.71
LINC01243-201ENST00000562065 USP17L18D6R9N7 530 aa10.64□□□□□ -0.71
LINC01243-201ENST00000562065 USP17L22D6RA61 530 aa10.64□□□□□ -0.71
LINC01243-201ENST00000562065 USP17L17D6RBQ6 530 aa10.64□□□□□ -0.71
LINC01243-201ENST00000562065 USP17L19D6RCP7 530 aa10.64□□□□□ -0.71
LINC01243-201ENST00000562065 USP17L20D6RJB6 530 aa10.64□□□□□ -0.71
LINC01243-201ENST00000562065 USP17L24Q0WX57 530 aa10.64□□□□□ -0.71
LINC01243-201ENST00000562065 PTK7Q13308 1070 aa10.64□□□□□ -0.71
LINC01243-201ENST00000562065 PNMA5Q96PV4 448 aa10.64□□□□□ -0.71
LINC01243-201ENST00000562065 VRTNQ9H8Y1 702 aa10.64□□□□□ -0.71
LINC01243-201ENST00000562065 CHD1O14646 1710 aa10.64□□□□□ -0.71
LINC01243-201ENST00000562065 RIMBP3CA6NJZ7 1639 aa10.63□□□□□ -0.71
LINC01243-201ENST00000562065 RIMBP3BA6NNM3 1639 aa10.63□□□□□ -0.71
LINC01243-201ENST00000562065 RIMBP3Q9UFD9 1639 aa10.63□□□□□ -0.71
LINC01243-201ENST00000562065 ANKMY2Q8IV38 441 aa10.63□□□□□ -0.71
LINC01243-201ENST00000562065 CCDC88BA6NC98 1476 aa10.62□□□□□ -0.71
LINC01243-201ENST00000562065 TRIM28Q13263 835 aaKnown RBP10.62□□□□□ -0.71
LINC01243-201ENST00000562065 RTN1Q16799 776 aa10.62□□□□□ -0.71
LINC01243-201ENST00000562065 KANK4Q5T7N3 995 aaPredicted RBP10.62□□□□□ -0.71
LINC01243-201ENST00000562065 DNMBPQ6XZF7 1577 aa10.61□□□□□ -0.71
LINC01243-201ENST00000562065 A6NJR5 290 aa10.61□□□□□ -0.71
LINC01243-201ENST00000562065 TOPBP1Q92547 1522 aa10.61□□□□□ -0.71
LINC01243-201ENST00000562065 ZNF608Q9ULD9 1512 aaPredicted RBP10.61□□□□□ -0.71
LINC01243-201ENST00000562065 TARBP1Q13395 1621 aaKnown RBP10.61□□□□□ -0.71
LINC01243-201ENST00000562065 FAM196BA6NMK8 535 aa10.6□□□□□ -0.71
LINC01243-201ENST00000562065 TGFBR3LH3BV60 316 aa10.6□□□□□ -0.71
LINC01243-201ENST00000562065 LILRB5O75023 590 aa10.6□□□□□ -0.71
LINC01243-201ENST00000562065 IGFBP4P22692 258 aa10.6□□□□□ -0.71
LINC01243-201ENST00000562065 TRAPPC3LQ5T215 181 aa10.6□□□□□ -0.71
LINC01243-201ENST00000562065 VTI1AQ96AJ9 217 aa10.6□□□□□ -0.71
LINC01243-201ENST00000562065 SEMA6BQ9H3T3 888 aa10.6□□□□□ -0.71
LINC01243-201ENST00000562065 PRDM6Q9NQX0 595 aa10.6□□□□□ -0.71
LINC01243-201ENST00000562065 NID1P14543 1247 aa10.59□□□□□ -0.71
LINC01243-201ENST00000562065 NFKB1P19838 968 aa10.59□□□□□ -0.71
LINC01243-201ENST00000562065 COL9A3Q14050 684 aaPredicted RBP10.59□□□□□ -0.71
LINC01243-201ENST00000562065 NUDT8Q8WV74 236 aa10.59□□□□□ -0.71
LINC01243-201ENST00000562065 JPH1Q9HDC5 661 aaPredicted RBP10.59□□□□□ -0.71
LINC01243-201ENST00000562065 KLK14Q9P0G3 267 aa10.59□□□□□ -0.71
LINC01243-201ENST00000562065 SLC6A14Q9UN76 642 aa10.59□□□□□ -0.71
LINC01243-201ENST00000562065 IFT140Q96RY7 1462 aa10.59□□□□□ -0.71
LINC01243-201ENST00000562065 IER5Q5VY09 327 aa10.58□□□□□ -0.72
LINC01243-201ENST00000562065 C20orf204Q6ZNR8 217 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms