RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 VEGFBP49765 207 aa9.95□□□□□ -0.82
DENND4A-204ENST00000562028 TMCO4Q5TGY1 634 aa9.95□□□□□ -0.82
DENND4A-204ENST00000562028 PIK3R5Q8WYR1 880 aa9.95□□□□□ -0.82
DENND4A-204ENST00000562028 DCDC2BA2VCK2 349 aa9.94□□□□□ -0.82
DENND4A-204ENST00000562028 VSIG8P0DPA2 414 aa9.94□□□□□ -0.82
DENND4A-204ENST00000562028 SLC16A10Q8TF71 515 aa9.94□□□□□ -0.82
DENND4A-204ENST00000562028 ABHD17AQ96GS6 310 aa9.94□□□□□ -0.82
DENND4A-204ENST00000562028 BRPF3Q9ULD4 1205 aa9.94□□□□□ -0.82
DENND4A-204ENST00000562028 NDUFB5O43674 189 aa9.93□□□□□ -0.82
DENND4A-204ENST00000562028 RPLP1P05386 114 aaKnown RBP9.93□□□□□ -0.82
DENND4A-204ENST00000562028 CCDC27Q2M243 656 aa9.93□□□□□ -0.82
DENND4A-204ENST00000562028 RGL4Q8IZJ4 473 aa9.93□□□□□ -0.82
DENND4A-204ENST00000562028 GPR152Q8TDT2 470 aa9.93□□□□□ -0.82
DENND4A-204ENST00000562028 EDEM1Q92611 657 aa9.93□□□□□ -0.82
DENND4A-204ENST00000562028 CITED4Q96RK1 184 aa9.93□□□□□ -0.82
DENND4A-204ENST00000562028 DCTN4Q9UJW0 460 aa9.93□□□□□ -0.82
DENND4A-204ENST00000562028 KCNH4Q9UQ05 1017 aa9.93□□□□□ -0.82
DENND4A-204ENST00000562028 RTCBQ9Y3I0 505 aaKnown RBP9.93□□□□□ -0.82
DENND4A-204ENST00000562028 PCSK2P16519 638 aa9.92□□□□□ -0.82
DENND4A-204ENST00000562028 USP5P45974 858 aa9.92□□□□□ -0.82
DENND4A-204ENST00000562028 MARSP56192 900 aaKnown RBP9.92□□□□□ -0.82
DENND4A-204ENST00000562028 DNM1Q05193 864 aaKnown RBP9.92□□□□□ -0.82
DENND4A-204ENST00000562028 CCDC87Q9NVE4 849 aa9.92□□□□□ -0.82
DENND4A-204ENST00000562028 MARK1Q9P0L2 795 aa9.92□□□□□ -0.82
DENND4A-204ENST00000562028 GPR25O00155 361 aa9.91□□□□□ -0.82
DENND4A-204ENST00000562028 PDGFAP04085 211 aa9.91□□□□□ -0.82
DENND4A-204ENST00000562028 GRNP28799 593 aaKnown RBP9.91□□□□□ -0.82
DENND4A-204ENST00000562028 SFSWAPQ12872 951 aaKnown RBP9.91□□□□□ -0.82
DENND4A-204ENST00000562028 FAM182BQ5T319 152 aa9.91□□□□□ -0.82
DENND4A-204ENST00000562028 POLIQ9UNA4 740 aa9.91□□□□□ -0.82
DENND4A-204ENST00000562028 FGFR3P22607 806 aa9.9□□□□□ -0.82
DENND4A-204ENST00000562028 CMTR1Q8N1G2 835 aaKnown RBP9.9□□□□□ -0.82
DENND4A-204ENST00000562028 NUDT16Q96DE0 195 aaKnown RBP9.9□□□□□ -0.82
DENND4A-204ENST00000562028 RBCK1Q9BYM8 510 aa9.9□□□□□ -0.82
DENND4A-204ENST00000562028 STRN4Q9NRL3 753 aa9.9□□□□□ -0.82
DENND4A-204ENST00000562028 HCN2Q9UL51 889 aa9.9□□□□□ -0.82
DENND4A-204ENST00000562028 FNDC3AQ9Y2H6 1198 aaKnown RBP9.9□□□□□ -0.82
DENND4A-204ENST00000562028 KCNMB2Q9Y691 235 aa9.9□□□□□ -0.82
DENND4A-204ENST00000562028 EGFRP00533 1210 aa9.89□□□□□ -0.83
DENND4A-204ENST00000562028 MAPK1P28482 360 aa9.89□□□□□ -0.83
DENND4A-204ENST00000562028 NFX1Q12986 1120 aaKnown RBP9.89□□□□□ -0.83
DENND4A-204ENST00000562028 GPR161Q8N6U8 529 aaKnown RBP9.89□□□□□ -0.83
DENND4A-204ENST00000562028 IRF7Q92985 503 aa9.89□□□□□ -0.83
DENND4A-204ENST00000562028 PODXL2Q9NZ53 605 aa9.89□□□□□ -0.83
DENND4A-204ENST00000562028 USP20Q9Y2K6 914 aa9.89□□□□□ -0.83
DENND4A-204ENST00000562028 CD33P20138 364 aa9.88□□□□□ -0.83
DENND4A-204ENST00000562028 PDE3BQ13370 1112 aa9.88□□□□□ -0.83
DENND4A-204ENST00000562028 GJD3Q8N144 294 aa9.88□□□□□ -0.83
DENND4A-204ENST00000562028 EFCC1Q9HA90 598 aa9.88□□□□□ -0.83
DENND4A-204ENST00000562028 EHHADHQ08426 723 aa9.87□□□□□ -0.83
DENND4A-204ENST00000562028 TTC16Q8NEE8 873 aa9.87□□□□□ -0.83
DENND4A-204ENST00000562028 GSX2Q9BZM3 304 aa9.87□□□□□ -0.83
DENND4A-204ENST00000562028 ERBB4Q15303 1308 aa9.86□□□□□ -0.83
DENND4A-204ENST00000562028 UBAP1LF5GYI3 381 aa9.86□□□□□ -0.83
DENND4A-204ENST00000562028 XYLBO75191 536 aa9.86□□□□□ -0.83
DENND4A-204ENST00000562028 MFAP1P55081 439 aaKnown RBP9.86□□□□□ -0.83
DENND4A-204ENST00000562028 CTBSQ01459 385 aa9.86□□□□□ -0.83
DENND4A-204ENST00000562028 CCINQ13939 588 aa9.86□□□□□ -0.83
DENND4A-204ENST00000562028 GAS6Q14393 721 aa9.86□□□□□ -0.83
DENND4A-204ENST00000562028 TRIP4Q15650 581 aaPredicted RBP9.86□□□□□ -0.83
DENND4A-204ENST00000562028 XKR5Q6UX68 686 aa9.86□□□□□ -0.83
DENND4A-204ENST00000562028 ZSCAN29Q8IWY8 852 aaPredicted RBP9.86□□□□□ -0.83
DENND4A-204ENST00000562028 ASB16Q96NS5 453 aa9.86□□□□□ -0.83
DENND4A-204ENST00000562028 FAM129BQ96TA1 746 aa9.86□□□□□ -0.83
DENND4A-204ENST00000562028 GGNBP2Q9H3C7 697 aa9.86□□□□□ -0.83
DENND4A-204ENST00000562028 MX2P20592 715 aa9.85□□□□□ -0.83
DENND4A-204ENST00000562028 SPEM2Q0P670 501 aa9.85□□□□□ -0.83
DENND4A-204ENST00000562028 C8orf34Q49A92 452 aa9.85□□□□□ -0.83
DENND4A-204ENST00000562028 PDE12Q6L8Q7 609 aaKnown RBP9.85□□□□□ -0.83
DENND4A-204ENST00000562028 DMRTB1Q96MA1 342 aa9.85□□□□□ -0.83
DENND4A-204ENST00000562028 CCDC9Q9Y3X0 531 aaKnown RBP9.85□□□□□ -0.83
DENND4A-204ENST00000562028 DNAJC14Q6Y2X3 702 aaPredicted RBP9.84□□□□□ -0.83
DENND4A-204ENST00000562028 TMC1Q8TDI8 760 aa9.84□□□□□ -0.83
DENND4A-204ENST00000562028 MBIPQ9NS73 344 aa9.84□□□□□ -0.83
DENND4A-204ENST00000562028 NSFL1CQ9UNZ2 370 aaKnown RBP9.84□□□□□ -0.83
DENND4A-204ENST00000562028 C2CD2LO14523 706 aa9.83□□□□□ -0.84
DENND4A-204ENST00000562028 ERCC3P19447 782 aa9.83□□□□□ -0.84
DENND4A-204ENST00000562028 NEUROD1Q13562 356 aa9.83□□□□□ -0.84
DENND4A-204ENST00000562028 GRIN2CQ14957 1233 aa9.83□□□□□ -0.84
DENND4A-204ENST00000562028 TMC7Q7Z402 723 aa9.83□□□□□ -0.84
DENND4A-204ENST00000562028 NLRP13Q86W25 1043 aa9.83□□□□□ -0.84
DENND4A-204ENST00000562028 SLC30A3Q99726 388 aa9.83□□□□□ -0.84
DENND4A-204ENST00000562028 COL25A1Q9BXS0 654 aaPredicted RBP9.83□□□□□ -0.84
DENND4A-204ENST00000562028 IGHA2P01877 340 aa9.82□□□□□ -0.84
DENND4A-204ENST00000562028 BMP4P12644 408 aa9.82□□□□□ -0.84
DENND4A-204ENST00000562028 ALKBH8Q96BT7 664 aaKnown RBP9.82□□□□□ -0.84
DENND4A-204ENST00000562028 ZNF775Q96BV0 537 aaPredicted RBP9.82□□□□□ -0.84
DENND4A-204ENST00000562028 PRR12Q9ULL5 1215 aa9.82□□□□□ -0.84
DENND4A-204ENST00000562028 SASH3O75995 380 aa9.81□□□□□ -0.84
DENND4A-204ENST00000562028 MAP2K3P46734 347 aa9.81□□□□□ -0.84
DENND4A-204ENST00000562028 ZNF438Q7Z4V0 828 aa9.81□□□□□ -0.84
DENND4A-204ENST00000562028 PNMA5Q96PV4 448 aa9.81□□□□□ -0.84
DENND4A-204ENST00000562028 ELP3Q9H9T3 547 aa9.81□□□□□ -0.84
DENND4A-204ENST00000562028 AVENQ9NQS1 362 aaPredicted RBP9.81□□□□□ -0.84
DENND4A-204ENST00000562028 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.81□□□□□ -0.84
DENND4A-204ENST00000562028 A6NHS1 94 aa9.8□□□□□ -0.84
DENND4A-204ENST00000562028 WFS1O76024 890 aa9.8□□□□□ -0.84
DENND4A-204ENST00000562028 TARSP26639 723 aaKnown RBP9.8□□□□□ -0.84
DENND4A-204ENST00000562028 RNFT1Q5M7Z0 435 aa9.8□□□□□ -0.84
DENND4A-204ENST00000562028 ZNF468Q5VIY5 522 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms