RNA–Protein interactions for RNA: ENST00000561823.1

MAP1LC3B-202, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-202ENST00000561823 DPY19L2Q6NUT2 758 aa22.53■■□□□ 1.2
MAP1LC3B-202ENST00000561823 UTP14AQ9BVJ6 771 aaKnown RBP22.53■■□□□ 1.2
MAP1LC3B-202ENST00000561823 DBF4Q9UBU7 674 aaPredicted RBP22.53■■□□□ 1.2
MAP1LC3B-202ENST00000561823 TNRC6CQ9HCJ0 1690 aaKnown RBP22.52■■□□□ 1.2
MAP1LC3B-202ENST00000561823 TCIRG1Q13488 830 aa22.52■■□□□ 1.2
MAP1LC3B-202ENST00000561823 SLC10A5Q5PT55 438 aa22.52■■□□□ 1.2
MAP1LC3B-202ENST00000561823 OLFM4Q6UX06 510 aa22.52■■□□□ 1.2
MAP1LC3B-202ENST00000561823 RTKN2Q8IZC4 609 aa22.52■■□□□ 1.2
MAP1LC3B-202ENST00000561823 RPGRQ92834 1020 aaKnown RBP22.52■■□□□ 1.2
MAP1LC3B-202ENST00000561823 VEGFAP15692 232 aaPredicted RBP22.51■■□□□ 1.19
MAP1LC3B-202ENST00000561823 FKBP4Q02790 459 aaKnown RBP eCLIP22.51■■□□□ 1.19
MAP1LC3B-202ENST00000561823 NLRP10Q86W26 655 aa22.51■■□□□ 1.19
MAP1LC3B-202ENST00000561823 CACNA1SQ13698 1873 aa22.51■■□□□ 1.19
MAP1LC3B-202ENST00000561823 RNF123Q5XPI4 1314 aa22.51■■□□□ 1.19
MAP1LC3B-202ENST00000561823 FSTL1Q12841 308 aa22.5■■□□□ 1.19
MAP1LC3B-202ENST00000561823 C3orf67Q6ZVT6 689 aa22.5■■□□□ 1.19
MAP1LC3B-202ENST00000561823 NLRP3Q96P20 1036 aa22.5■■□□□ 1.19
MAP1LC3B-202ENST00000561823 CRAMP1Q96RY5 1269 aa22.5■■□□□ 1.19
MAP1LC3B-202ENST00000561823 HYPKQ9NX55 129 aa22.5■■□□□ 1.19
MAP1LC3B-202ENST00000561823 TIAM2Q8IVF5 1701 aa22.5■■□□□ 1.19
MAP1LC3B-202ENST00000561823 CCDC88AQ3V6T2 1871 aa22.49■■□□□ 1.19
MAP1LC3B-202ENST00000561823 ANP32CO43423 234 aa22.49■■□□□ 1.19
MAP1LC3B-202ENST00000561823 PLBD2Q8NHP8 589 aa22.49■■□□□ 1.19
MAP1LC3B-202ENST00000561823 RBM17Q96I25 401 aaKnown RBP22.49■■□□□ 1.19
MAP1LC3B-202ENST00000561823 POTECB2RU33 542 aa22.48■■□□□ 1.19
MAP1LC3B-202ENST00000561823 ANKRD13DQ6ZTN6 518 aa22.48■■□□□ 1.19
MAP1LC3B-202ENST00000561823 ZNF277Q9NRM2 450 aaPredicted RBP22.48■■□□□ 1.19
MAP1LC3B-202ENST00000561823 APLP1P51693 650 aa22.47■■□□□ 1.19
MAP1LC3B-202ENST00000561823 CC2D2BQ6DHV5 1058 aa22.47■■□□□ 1.19
MAP1LC3B-202ENST00000561823 MRS2Q9HD23 443 aa22.47■■□□□ 1.19
MAP1LC3B-202ENST00000561823 ELL2O00472 640 aaPredicted RBP22.46■■□□□ 1.19
MAP1LC3B-202ENST00000561823 CCDC27Q2M243 656 aa22.46■■□□□ 1.19
MAP1LC3B-202ENST00000561823 SYNE4Q8N205 404 aa22.46■■□□□ 1.19
MAP1LC3B-202ENST00000561823 PSMD1Q99460 953 aa22.46■■□□□ 1.19
MAP1LC3B-202ENST00000561823 TRMT112Q9UI30 125 aaKnown RBP22.46■■□□□ 1.19
MAP1LC3B-202ENST00000561823 SNED1Q8TER0 1413 aa22.46■■□□□ 1.19
MAP1LC3B-202ENST00000561823 DICER1Q9UPY3 1922 aaKnown RBP22.45■■□□□ 1.18
MAP1LC3B-202ENST00000561823 CEP350Q5VT06 3117 aa22.45■■□□□ 1.18
MAP1LC3B-202ENST00000561823 C8orf58Q8NAV2 365 aa22.45■■□□□ 1.18
MAP1LC3B-202ENST00000561823 DDNO94850 711 aaPredicted RBP22.44■■□□□ 1.18
MAP1LC3B-202ENST00000561823 GRIPAP1Q4V328 841 aa22.44■■□□□ 1.18
MAP1LC3B-202ENST00000561823 SMC1BQ8NDV3 1235 aa22.44■■□□□ 1.18
MAP1LC3B-202ENST00000561823 SH3TC1Q8TE82 1336 aa22.44■■□□□ 1.18
MAP1LC3B-202ENST00000561823 WDR90Q96KV7 1748 aa22.43■■□□□ 1.18
MAP1LC3B-202ENST00000561823 PPEF1O14829 653 aaPredicted RBP22.43■■□□□ 1.18
MAP1LC3B-202ENST00000561823 HCLS1P14317 486 aaPredicted RBP22.43■■□□□ 1.18
MAP1LC3B-202ENST00000561823 IARSP41252 1262 aaKnown RBP22.43■■□□□ 1.18
MAP1LC3B-202ENST00000561823 NCBP3Q53F19 620 aaKnown RBP22.43■■□□□ 1.18
MAP1LC3B-202ENST00000561823 WWC1Q8IX03 1113 aa22.43■■□□□ 1.18
MAP1LC3B-202ENST00000561823 ISCA1Q9BUE6 129 aa22.43■■□□□ 1.18
MAP1LC3B-202ENST00000561823 ANKRD36CQ5JPF3 1778 aa22.42■■□□□ 1.18
MAP1LC3B-202ENST00000561823 TRIM28Q13263 835 aaKnown RBP22.41■■□□□ 1.18
MAP1LC3B-202ENST00000561823 CHMP4AQ9BY43 222 aa22.41■■□□□ 1.18
MAP1LC3B-202ENST00000561823 PHAXQ9H814 394 aaKnown RBP22.41■■□□□ 1.18
MAP1LC3B-202ENST00000561823 ABCC4O15439 1325 aa22.4■■□□□ 1.18
MAP1LC3B-202ENST00000561823 ATP5J2-PTCD1G3V325 749 aa22.4■■□□□ 1.18
MAP1LC3B-202ENST00000561823 TCERG1O14776 1098 aaKnown RBP22.4■■□□□ 1.18
MAP1LC3B-202ENST00000561823 SLC51AQ86UW1 340 aa22.4■■□□□ 1.18
MAP1LC3B-202ENST00000561823 FZD9O00144 591 aa22.39■■□□□ 1.17
MAP1LC3B-202ENST00000561823 BBOX1O75936 387 aa22.39■■□□□ 1.17
MAP1LC3B-202ENST00000561823 GOLGA2Q08379 1002 aa22.39■■□□□ 1.17
MAP1LC3B-202ENST00000561823 CCDC30Q5VVM6 783 aa22.39■■□□□ 1.17
MAP1LC3B-202ENST00000561823 RIC3Q7Z5B4 369 aa22.39■■□□□ 1.17
MAP1LC3B-202ENST00000561823 TSPYL6Q8N831 410 aa22.39■■□□□ 1.17
MAP1LC3B-202ENST00000561823 TSR2Q969E8 191 aaKnown RBP22.39■■□□□ 1.17
MAP1LC3B-202ENST00000561823 ZNF428Q96B54 188 aa22.39■■□□□ 1.17
MAP1LC3B-202ENST00000561823 L3MBTL3Q96JM7 780 aaPredicted RBP22.39■■□□□ 1.17
MAP1LC3B-202ENST00000561823 ATP6V0A2Q9Y487 856 aa22.39■■□□□ 1.17
MAP1LC3B-202ENST00000561823 IL16Q14005 1332 aa22.38■■□□□ 1.17
MAP1LC3B-202ENST00000561823 DNAJC5GQ8N7S2 189 aa22.38■■□□□ 1.17
MAP1LC3B-202ENST00000561823 FAM89AQ96GI7 184 aa22.38■■□□□ 1.17
MAP1LC3B-202ENST00000561823 TMX4Q9H1E5 349 aaPredicted RBP22.38■■□□□ 1.17
MAP1LC3B-202ENST00000561823 ZNF541Q9H0D2 1346 aa22.37■■□□□ 1.17
MAP1LC3B-202ENST00000561823 DDX46Q7L014 1031 aaKnown RBP22.37■■□□□ 1.17
MAP1LC3B-202ENST00000561823 JDP2Q8WYK2 163 aa22.37■■□□□ 1.17
MAP1LC3B-202ENST00000561823 IQCA1LA6NCM1 817 aa22.36■■□□□ 1.17
MAP1LC3B-202ENST00000561823 SP8Q8IXZ3 490 aa22.36■■□□□ 1.17
MAP1LC3B-202ENST00000561823 GRAPQ13588 217 aa22.35■■□□□ 1.17
MAP1LC3B-202ENST00000561823 GRAPLQ8TC17 118 aaPredicted RBP22.35■■□□□ 1.17
MAP1LC3B-202ENST00000561823 LARGE2Q8N3Y3 721 aa22.34■■□□□ 1.17
MAP1LC3B-202ENST00000561823 DDX58O95786 925 aaKnown RBP22.33■■□□□ 1.17
MAP1LC3B-202ENST00000561823 HTRA3P83110 453 aa22.33■■□□□ 1.17
MAP1LC3B-202ENST00000561823 SF3B3Q15393 1217 aaKnown RBP22.33■■□□□ 1.17
MAP1LC3B-202ENST00000561823 GPC2Q8N158 579 aa22.33■■□□□ 1.17
MAP1LC3B-202ENST00000561823 RTFDC1Q9BY42 306 aaPredicted RBP22.33■■□□□ 1.17
MAP1LC3B-202ENST00000561823 VPS33BQ9H267 617 aa22.33■■□□□ 1.17
MAP1LC3B-202ENST00000561823 TAF1DQ9H5J8 278 aaPredicted RBP22.33■■□□□ 1.17
MAP1LC3B-202ENST00000561823 IRS4O14654 1257 aaPredicted RBP22.32■■□□□ 1.16
MAP1LC3B-202ENST00000561823 POTEIP0CG38 1075 aa22.32■■□□□ 1.16
MAP1LC3B-202ENST00000561823 POTEJP0CG39 1038 aa22.32■■□□□ 1.16
MAP1LC3B-202ENST00000561823 EIF6P56537 245 aaKnown RBP22.32■■□□□ 1.16
MAP1LC3B-202ENST00000561823 TWISTNBQ3B726 338 aaPredicted RBP22.32■■□□□ 1.16
MAP1LC3B-202ENST00000561823 RTL5Q5HYW3 569 aaPredicted RBP22.32■■□□□ 1.16
MAP1LC3B-202ENST00000561823 WDR63Q8IWG1 891 aa22.32■■□□□ 1.16
MAP1LC3B-202ENST00000561823 ZBTB38Q8NAP3 1195 aaPredicted RBP22.32■■□□□ 1.16
MAP1LC3B-202ENST00000561823 CCDC191Q8NCU4 936 aa22.32■■□□□ 1.16
MAP1LC3B-202ENST00000561823 MYD88Q99836 296 aa22.32■■□□□ 1.16
MAP1LC3B-202ENST00000561823 METTL22Q9BUU2 404 aaPredicted RBP22.32■■□□□ 1.16
MAP1LC3B-202ENST00000561823 COL4A5P29400 1685 aa22.32■■□□□ 1.16
MAP1LC3B-202ENST00000561823 LAMB2P55268 1798 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms