RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 NFKBIEO00221 500 aa20.01■□□□□ 0.79
CCDC113-203ENST00000561517 NLRP10Q86W26 655 aa20.01■□□□□ 0.79
CCDC113-203ENST00000561517 C7orf43Q8WVR3 580 aa20.01■□□□□ 0.79
CCDC113-203ENST00000561517 UTP14AQ9BVJ6 771 aaKnown RBP20.01■□□□□ 0.79
CCDC113-203ENST00000561517 GPBP1L1Q9HC44 474 aaPredicted RBP20.01■□□□□ 0.79
CCDC113-203ENST00000561517 RNF181Q9P0P0 153 aa20.01■□□□□ 0.79
CCDC113-203ENST00000561517 PRELPP51888 382 aa20■□□□□ 0.79
CCDC113-203ENST00000561517 SLC10A5Q5PT55 438 aa20■□□□□ 0.79
CCDC113-203ENST00000561517 CCDC30Q5VVM6 783 aa20■□□□□ 0.79
CCDC113-203ENST00000561517 SALL2Q9Y467 1007 aaPredicted RBP20■□□□□ 0.79
CCDC113-203ENST00000561517 LAMB2P55268 1798 aa20■□□□□ 0.79
CCDC113-203ENST00000561517 LMNB1P20700 586 aa19.99■□□□□ 0.79
CCDC113-203ENST00000561517 SOGA3Q5TF21 947 aa19.99■□□□□ 0.79
CCDC113-203ENST00000561517 PHAXQ9H814 394 aaKnown RBP19.99■□□□□ 0.79
CCDC113-203ENST00000561517 ZNF219Q9P2Y4 722 aaPredicted RBP19.99■□□□□ 0.79
CCDC113-203ENST00000561517 LTBP3Q9NS15 1303 aa19.99■□□□□ 0.79
CCDC113-203ENST00000561517 ALDH1B1P30837 517 aa19.98■□□□□ 0.79
CCDC113-203ENST00000561517 HOXA10P31260 410 aaPredicted RBP19.98■□□□□ 0.79
CCDC113-203ENST00000561517 ZNF526Q8TF50 670 aaPredicted RBP19.98■□□□□ 0.79
CCDC113-203ENST00000561517 ISCA1Q9BUE6 129 aa19.98■□□□□ 0.79
CCDC113-203ENST00000561517 TWISTNBQ3B726 338 aaPredicted RBP19.97■□□□□ 0.79
CCDC113-203ENST00000561517 FANCIQ9NVI1 1328 aa19.97■□□□□ 0.79
CCDC113-203ENST00000561517 ZC3H4Q9UPT8 1303 aaKnown RBP19.97■□□□□ 0.79
CCDC113-203ENST00000561517 TIAM2Q8IVF5 1701 aa19.96■□□□□ 0.79
CCDC113-203ENST00000561517 C3orf67Q6ZVT6 689 aa19.96■□□□□ 0.79
CCDC113-203ENST00000561517 C1QTNF8P60827 252 aa19.95■□□□□ 0.78
CCDC113-203ENST00000561517 GOLGA2Q08379 1002 aa19.95■□□□□ 0.78
CCDC113-203ENST00000561517 TRIM28Q13263 835 aaKnown RBP19.95■□□□□ 0.78
CCDC113-203ENST00000561517 RPGRQ92834 1020 aaKnown RBP19.95■□□□□ 0.78
CCDC113-203ENST00000561517 NLRP3Q96P20 1036 aa19.95■□□□□ 0.78
CCDC113-203ENST00000561517 TRMT112Q9UI30 125 aaKnown RBP19.95■□□□□ 0.78
CCDC113-203ENST00000561517 DDX60Q8IY21 1712 aaKnown RBP19.95■□□□□ 0.78
CCDC113-203ENST00000561517 SH3TC1Q8TE82 1336 aa19.95■□□□□ 0.78
CCDC113-203ENST00000561517 CCDC93Q567U6 631 aa19.94■□□□□ 0.78
CCDC113-203ENST00000561517 RIC3Q7Z5B4 369 aa19.94■□□□□ 0.78
CCDC113-203ENST00000561517 SYNE4Q8N205 404 aa19.94■□□□□ 0.78
CCDC113-203ENST00000561517 CRAMP1Q96RY5 1269 aa19.94■□□□□ 0.78
CCDC113-203ENST00000561517 TAOK3Q9H2K8 898 aa19.94■□□□□ 0.78
CCDC113-203ENST00000561517 SPINK5Q9NQ38 1064 aaPredicted RBP19.94■□□□□ 0.78
CCDC113-203ENST00000561517 ATP5J2-PTCD1G3V325 749 aa19.93■□□□□ 0.78
CCDC113-203ENST00000561517 KIF3CO14782 793 aa19.93■□□□□ 0.78
CCDC113-203ENST00000561517 RBM17Q96I25 401 aaKnown RBP19.93■□□□□ 0.78
CCDC113-203ENST00000561517 STK31Q9BXU1 1019 aa19.93■□□□□ 0.78
CCDC113-203ENST00000561517 ZNF521Q96K83 1311 aa19.93■□□□□ 0.78
CCDC113-203ENST00000561517 CCER2I3L3R5 266 aa19.92■□□□□ 0.78
CCDC113-203ENST00000561517 SNED1Q8TER0 1413 aa19.92■□□□□ 0.78
CCDC113-203ENST00000561517 TAF1P21675 1872 aa19.91■□□□□ 0.78
CCDC113-203ENST00000561517 VAMP4O75379 141 aa19.91■□□□□ 0.78
CCDC113-203ENST00000561517 DDX58O95786 925 aaKnown RBP19.91■□□□□ 0.78
CCDC113-203ENST00000561517 HCLS1P14317 486 aaPredicted RBP19.91■□□□□ 0.78
CCDC113-203ENST00000561517 OLFM4Q6UX06 510 aa19.91■□□□□ 0.78
CCDC113-203ENST00000561517 RTKN2Q8IZC4 609 aa19.91■□□□□ 0.78
CCDC113-203ENST00000561517 FKBP4Q02790 459 aaKnown RBP eCLIP19.9■□□□□ 0.78
CCDC113-203ENST00000561517 EXOSC9Q06265 439 aaKnown RBP19.9■□□□□ 0.78
CCDC113-203ENST00000561517 CC2D2BQ6DHV5 1058 aa19.9■□□□□ 0.78
CCDC113-203ENST00000561517 METTL22Q9BUU2 404 aaPredicted RBP19.9■□□□□ 0.78
CCDC113-203ENST00000561517 MYH16Q9H6N6 1097 aa19.9■□□□□ 0.78
CCDC113-203ENST00000561517 KDM2BQ8NHM5 1336 aa19.9■□□□□ 0.78
CCDC113-203ENST00000561517 TCERG1O14776 1098 aaKnown RBP19.89■□□□□ 0.77
CCDC113-203ENST00000561517 KSR2Q6VAB6 950 aa19.89■□□□□ 0.77
CCDC113-203ENST00000561517 FAM89AQ96GI7 184 aa19.89■□□□□ 0.77
CCDC113-203ENST00000561517 MYD88Q99836 296 aa19.89■□□□□ 0.77
CCDC113-203ENST00000561517 NMRK2Q9NPI5 230 aa19.89■□□□□ 0.77
CCDC113-203ENST00000561517 GLTPD2A6NH11 291 aa19.88■□□□□ 0.77
CCDC113-203ENST00000561517 SLC4A2P04920 1241 aa19.88■□□□□ 0.77
CCDC113-203ENST00000561517 CCDC191Q8NCU4 936 aa19.88■□□□□ 0.77
CCDC113-203ENST00000561517 ZNF428Q96B54 188 aa19.88■□□□□ 0.77
CCDC113-203ENST00000561517 ABCC4O15439 1325 aa19.87■□□□□ 0.77
CCDC113-203ENST00000561517 PI4KAP2A4QPH2 592 aa19.87■□□□□ 0.77
CCDC113-203ENST00000561517 GRIPAP1Q4V328 841 aa19.87■□□□□ 0.77
CCDC113-203ENST00000561517 G2E3Q7L622 706 aa19.87■□□□□ 0.77
CCDC113-203ENST00000561517 PI4KAP1Q8N8J0 262 aa19.87■□□□□ 0.77
CCDC113-203ENST00000561517 PSMD1Q99460 953 aa19.87■□□□□ 0.77
CCDC113-203ENST00000561517 MAP3K2Q9Y2U5 619 aa19.87■□□□□ 0.77
CCDC113-203ENST00000561517 PPEF1O14829 653 aaPredicted RBP19.86■□□□□ 0.77
CCDC113-203ENST00000561517 ZBTB38Q8NAP3 1195 aaPredicted RBP19.86■□□□□ 0.77
CCDC113-203ENST00000561517 BBOX1O75936 387 aa19.85■□□□□ 0.77
CCDC113-203ENST00000561517 FLIIQ13045 1269 aa19.85■□□□□ 0.77
CCDC113-203ENST00000561517 SF3B3Q15393 1217 aaKnown RBP19.85■□□□□ 0.77
CCDC113-203ENST00000561517 WDR90Q96KV7 1748 aa19.85■□□□□ 0.77
CCDC113-203ENST00000561517 IRS4O14654 1257 aaPredicted RBP19.84■□□□□ 0.77
CCDC113-203ENST00000561517 PCCAP05165 728 aaPredicted RBP19.84■□□□□ 0.77
CCDC113-203ENST00000561517 DDX46Q7L014 1031 aaKnown RBP19.84■□□□□ 0.77
CCDC113-203ENST00000561517 ZNF277Q9NRM2 450 aaPredicted RBP19.84■□□□□ 0.77
CCDC113-203ENST00000561517 CWC25Q9NXE8 425 aaPredicted RBP19.84■□□□□ 0.77
CCDC113-203ENST00000561517 ATP6V0A2Q9Y487 856 aa19.84■□□□□ 0.77
CCDC113-203ENST00000561517 MYH3P11055 1940 aa19.84■□□□□ 0.77
CCDC113-203ENST00000561517 IGKV5-2P06315 115 aa19.83■□□□□ 0.77
CCDC113-203ENST00000561517 GRAPQ13588 217 aa19.83■□□□□ 0.77
CCDC113-203ENST00000561517 RTL5Q5HYW3 569 aaPredicted RBP19.83■□□□□ 0.77
CCDC113-203ENST00000561517 DPY19L2Q6NUT2 758 aa19.83■□□□□ 0.77
CCDC113-203ENST00000561517 SLC51AQ86UW1 340 aa19.83■□□□□ 0.77
CCDC113-203ENST00000561517 GRAPLQ8TC17 118 aaPredicted RBP19.83■□□□□ 0.77
CCDC113-203ENST00000561517 RRAGCQ9HB90 399 aa19.83■□□□□ 0.77
CCDC113-203ENST00000561517 LRRC37AA6NMS7 1700 aa19.82■□□□□ 0.76
CCDC113-203ENST00000561517 TOMM70O94826 608 aa19.82■□□□□ 0.76
CCDC113-203ENST00000561517 HSP90B1P14625 803 aaKnown RBP19.82■□□□□ 0.76
CCDC113-203ENST00000561517 IARSP41252 1262 aaKnown RBP19.82■□□□□ 0.76
CCDC113-203ENST00000561517 SP8Q8IXZ3 490 aa19.82■□□□□ 0.76
CCDC113-203ENST00000561517 NEXNQ0ZGT2 675 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms