RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 UTP14AQ9BVJ6 771 aaKnown RBP26.75■■□□□ 1.87
TPM1-232ENST00000561425 CHMP4AQ9BY43 222 aa26.75■■□□□ 1.87
TPM1-232ENST00000561425 ZC3H4Q9UPT8 1303 aaKnown RBP26.74■■□□□ 1.87
TPM1-232ENST00000561425 ALDH1B1P30837 517 aa26.74■■□□□ 1.87
TPM1-232ENST00000561425 SOGA3Q5TF21 947 aa26.74■■□□□ 1.87
TPM1-232ENST00000561425 TSR2Q969E8 191 aaKnown RBP26.74■■□□□ 1.87
TPM1-232ENST00000561425 ISCA1Q9BUE6 129 aa26.74■■□□□ 1.87
TPM1-232ENST00000561425 ZNF526Q8TF50 670 aaPredicted RBP26.73■■□□□ 1.87
TPM1-232ENST00000561425 ARFGEF2Q9Y6D5 1785 aa26.73■■□□□ 1.87
TPM1-232ENST00000561425 KIF3CO14782 793 aa26.72■■□□□ 1.87
TPM1-232ENST00000561425 TRIM28Q13263 835 aaKnown RBP26.72■■□□□ 1.87
TPM1-232ENST00000561425 FAM9BQ8IZU0 186 aa26.72■■□□□ 1.87
TPM1-232ENST00000561425 TNRC6CQ9HCJ0 1690 aaKnown RBP26.72■■□□□ 1.87
TPM1-232ENST00000561425 CCDC30Q5VVM6 783 aa26.71■■□□□ 1.87
TPM1-232ENST00000561425 PHAXQ9H814 394 aaKnown RBP26.71■■□□□ 1.87
TPM1-232ENST00000561425 ZNF219Q9P2Y4 722 aaPredicted RBP26.71■■□□□ 1.87
TPM1-232ENST00000561425 C3orf67Q6ZVT6 689 aa26.7■■□□□ 1.86
TPM1-232ENST00000561425 FER1L6Q2WGJ9 1857 aa26.7■■□□□ 1.86
TPM1-232ENST00000561425 CRAMP1Q96RY5 1269 aa26.69■■□□□ 1.86
TPM1-232ENST00000561425 NLRP3Q96P20 1036 aa26.68■■□□□ 1.86
TPM1-232ENST00000561425 TAOK3Q9H2K8 898 aa26.68■■□□□ 1.86
TPM1-232ENST00000561425 SNED1Q8TER0 1413 aa26.67■■□□□ 1.86
TPM1-232ENST00000561425 ANKRD36CQ5JPF3 1778 aa26.67■■□□□ 1.86
TPM1-232ENST00000561425 CCDC93Q567U6 631 aa26.67■■□□□ 1.86
TPM1-232ENST00000561425 FANCIQ9NVI1 1328 aa26.66■■□□□ 1.86
TPM1-232ENST00000561425 TWISTNBQ3B726 338 aaPredicted RBP26.66■■□□□ 1.86
TPM1-232ENST00000561425 SYNE4Q8N205 404 aa26.66■■□□□ 1.86
TPM1-232ENST00000561425 TRMT112Q9UI30 125 aaKnown RBP26.66■■□□□ 1.86
TPM1-232ENST00000561425 SH3TC1Q8TE82 1336 aa26.65■■□□□ 1.86
TPM1-232ENST00000561425 RTKN2Q8IZC4 609 aa26.65■■□□□ 1.86
TPM1-232ENST00000561425 RPGRQ92834 1020 aaKnown RBP26.65■■□□□ 1.86
TPM1-232ENST00000561425 RBM17Q96I25 401 aaKnown RBP26.65■■□□□ 1.86
TPM1-232ENST00000561425 SPINK5Q9NQ38 1064 aaPredicted RBP26.65■■□□□ 1.86
TPM1-232ENST00000561425 SALL2Q9Y467 1007 aaPredicted RBP26.65■■□□□ 1.86
TPM1-232ENST00000561425 CC2D2BQ6DHV5 1058 aa26.64■■□□□ 1.86
TPM1-232ENST00000561425 OLFM4Q6UX06 510 aa26.64■■□□□ 1.86
TPM1-232ENST00000561425 NMRK2Q9NPI5 230 aa26.64■■□□□ 1.86
TPM1-232ENST00000561425 ZNF521Q96K83 1311 aa26.64■■□□□ 1.85
TPM1-232ENST00000561425 ATP5J2-PTCD1G3V325 749 aa26.63■■□□□ 1.85
TPM1-232ENST00000561425 GOLGA2Q08379 1002 aa26.63■■□□□ 1.85
TPM1-232ENST00000561425 RIC3Q7Z5B4 369 aa26.63■■□□□ 1.85
TPM1-232ENST00000561425 KDM2BQ8NHM5 1336 aa26.63■■□□□ 1.85
TPM1-232ENST00000561425 GLTPD2A6NH11 291 aa26.62■■□□□ 1.85
TPM1-232ENST00000561425 VAMP4O75379 141 aa26.62■■□□□ 1.85
TPM1-232ENST00000561425 HCLS1P14317 486 aaPredicted RBP26.62■■□□□ 1.85
TPM1-232ENST00000561425 FKBP4Q02790 459 aaKnown RBP eCLIP26.62■■□□□ 1.85
TPM1-232ENST00000561425 GRIPAP1Q4V328 841 aa26.61■■□□□ 1.85
TPM1-232ENST00000561425 PSMD1Q99460 953 aa26.6■■□□□ 1.85
TPM1-232ENST00000561425 METTL22Q9BUU2 404 aaPredicted RBP26.6■■□□□ 1.85
TPM1-232ENST00000561425 CCER2I3L3R5 266 aa26.59■■□□□ 1.85
TPM1-232ENST00000561425 DDX58O95786 925 aaKnown RBP26.59■■□□□ 1.85
TPM1-232ENST00000561425 SF3B3Q15393 1217 aaKnown RBP26.59■■□□□ 1.85
TPM1-232ENST00000561425 KSR2Q6VAB6 950 aa26.59■■□□□ 1.85
TPM1-232ENST00000561425 STK31Q9BXU1 1019 aa26.59■■□□□ 1.85
TPM1-232ENST00000561425 CACNA1SQ13698 1873 aa26.58■■□□□ 1.85
TPM1-232ENST00000561425 EXOSC9Q06265 439 aaKnown RBP26.58■■□□□ 1.85
TPM1-232ENST00000561425 CCDC191Q8NCU4 936 aa26.58■■□□□ 1.85
TPM1-232ENST00000561425 FAM89AQ96GI7 184 aa26.58■■□□□ 1.85
TPM1-232ENST00000561425 BBOX1O75936 387 aa26.57■■□□□ 1.84
TPM1-232ENST00000561425 TOMM70O94826 608 aa26.57■■□□□ 1.84
TPM1-232ENST00000561425 SLC4A2P04920 1241 aa26.57■■□□□ 1.84
TPM1-232ENST00000561425 ZBTB38Q8NAP3 1195 aaPredicted RBP26.57■■□□□ 1.84
TPM1-232ENST00000561425 CCDC88AQ3V6T2 1871 aa26.56■■□□□ 1.84
TPM1-232ENST00000561425 PPEF1O14829 653 aaPredicted RBP26.56■■□□□ 1.84
TPM1-232ENST00000561425 G2E3Q7L622 706 aa26.56■■□□□ 1.84
TPM1-232ENST00000561425 MYD88Q99836 296 aa26.56■■□□□ 1.84
TPM1-232ENST00000561425 RRAGCQ9HB90 399 aa26.56■■□□□ 1.84
TPM1-232ENST00000561425 ATP6V0A2Q9Y487 856 aa26.56■■□□□ 1.84
TPM1-232ENST00000561425 DICER1Q9UPY3 1922 aaKnown RBP26.56■■□□□ 1.84
TPM1-232ENST00000561425 ABCC4O15439 1325 aa26.56■■□□□ 1.84
TPM1-232ENST00000561425 TCERG1O14776 1098 aaKnown RBP26.55■■□□□ 1.84
TPM1-232ENST00000561425 MYH16Q9H6N6 1097 aa26.55■■□□□ 1.84
TPM1-232ENST00000561425 MAP3K2Q9Y2U5 619 aa26.55■■□□□ 1.84
TPM1-232ENST00000561425 PI4KAP2A4QPH2 592 aa26.54■■□□□ 1.84
TPM1-232ENST00000561425 POTECB2RU33 542 aa26.54■■□□□ 1.84
TPM1-232ENST00000561425 DPY19L2Q6NUT2 758 aa26.54■■□□□ 1.84
TPM1-232ENST00000561425 PI4KAP1Q8N8J0 262 aa26.54■■□□□ 1.84
TPM1-232ENST00000561425 ZNF428Q96B54 188 aa26.54■■□□□ 1.84
TPM1-232ENST00000561425 ZNF277Q9NRM2 450 aaPredicted RBP26.54■■□□□ 1.84
TPM1-232ENST00000561425 SLC51AQ86UW1 340 aa26.53■■□□□ 1.84
TPM1-232ENST00000561425 SP8Q8IXZ3 490 aa26.53■■□□□ 1.84
TPM1-232ENST00000561425 IRS4O14654 1257 aaPredicted RBP26.52■■□□□ 1.84
TPM1-232ENST00000561425 PCCAP05165 728 aaPredicted RBP26.52■■□□□ 1.84
TPM1-232ENST00000561425 IGKV5-2P06315 115 aa26.52■■□□□ 1.84
TPM1-232ENST00000561425 IARSP41252 1262 aaKnown RBP26.52■■□□□ 1.84
TPM1-232ENST00000561425 LAMB2P55268 1798 aa26.52■■□□□ 1.84
TPM1-232ENST00000561425 GRAPQ13588 217 aa26.52■■□□□ 1.84
TPM1-232ENST00000561425 DDX46Q7L014 1031 aaKnown RBP26.52■■□□□ 1.84
TPM1-232ENST00000561425 TIAM2Q8IVF5 1701 aa26.52■■□□□ 1.84
TPM1-232ENST00000561425 GRAPLQ8TC17 118 aaPredicted RBP26.52■■□□□ 1.84
TPM1-232ENST00000561425 CWC25Q9NXE8 425 aaPredicted RBP26.52■■□□□ 1.84
TPM1-232ENST00000561425 VEGFAP15692 232 aaPredicted RBP26.51■■□□□ 1.83
TPM1-232ENST00000561425 RBM46Q8TBY0 533 aaKnown RBP26.51■■□□□ 1.83
TPM1-232ENST00000561425 DDX60Q8IY21 1712 aaKnown RBP26.51■■□□□ 1.83
TPM1-232ENST00000561425 FZD9O00144 591 aa26.5■■□□□ 1.83
TPM1-232ENST00000561425 FLIIQ13045 1269 aa26.5■■□□□ 1.83
TPM1-232ENST00000561425 RTFDC1Q9BY42 306 aaPredicted RBP26.5■■□□□ 1.83
TPM1-232ENST00000561425 TMC4Q7Z404 712 aa26.49■■□□□ 1.83
TPM1-232ENST00000561425 VPS33BQ9H267 617 aa26.49■■□□□ 1.83
TPM1-232ENST00000561425 WDR90Q96KV7 1748 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms