RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 CWF19L2Q2TBE0 894 aaKnown RBP13.05□□□□□ -0.32
LRRC28-221ENST00000561276 SUSD4Q5VX71 490 aa13.05□□□□□ -0.32
LRRC28-221ENST00000561276 ZKSCAN2Q63HK3 967 aa13.05□□□□□ -0.32
LRRC28-221ENST00000561276 ATF7IPQ6VMQ6 1270 aa13.05□□□□□ -0.32
LRRC28-221ENST00000561276 TPTE2Q6XPS3 522 aa13.05□□□□□ -0.32
LRRC28-221ENST00000561276 PPP1R42Q7Z4L9 355 aa13.05□□□□□ -0.32
LRRC28-221ENST00000561276 NLRP10Q86W26 655 aa13.05□□□□□ -0.32
LRRC28-221ENST00000561276 CARMIL3Q8ND23 1372 aa13.05□□□□□ -0.32
LRRC28-221ENST00000561276 NRXN2Q9P2S2 1712 aa13.05□□□□□ -0.32
LRRC28-221ENST00000561276 PLIN1O60240 522 aa13.04□□□□□ -0.32
LRRC28-221ENST00000561276 TRIM27P14373 513 aa13.04□□□□□ -0.32
LRRC28-221ENST00000561276 PARP10Q53GL7 1025 aa13.04□□□□□ -0.32
LRRC28-221ENST00000561276 BEND3Q5T5X7 828 aa13.04□□□□□ -0.32
LRRC28-221ENST00000561276 NBPF5PQ86XG9 351 aaPredicted RBP13.04□□□□□ -0.32
LRRC28-221ENST00000561276 CCDC191Q8NCU4 936 aa13.04□□□□□ -0.32
LRRC28-221ENST00000561276 LINS1Q8NG48 757 aa13.04□□□□□ -0.32
LRRC28-221ENST00000561276 CLUAP1Q96AJ1 413 aa13.04□□□□□ -0.32
LRRC28-221ENST00000561276 TNNQ9UQP3 1299 aa13.04□□□□□ -0.32
LRRC28-221ENST00000561276 NEURL1BA8MQ27 555 aa13.03□□□□□ -0.32
LRRC28-221ENST00000561276 NPHP1O15259 732 aa13.03□□□□□ -0.32
LRRC28-221ENST00000561276 GTF2E1P29083 439 aaPredicted RBP13.03□□□□□ -0.32
LRRC28-221ENST00000561276 UTP14AQ9BVJ6 771 aaKnown RBP13.03□□□□□ -0.32
LRRC28-221ENST00000561276 SRCIN1Q9C0H9 1055 aa13.03□□□□□ -0.32
LRRC28-221ENST00000561276 NYXQ9GZU5 481 aa13.03□□□□□ -0.32
LRRC28-221ENST00000561276 CWC25Q9NXE8 425 aaPredicted RBP13.03□□□□□ -0.32
LRRC28-221ENST00000561276 TRMT112Q9UI30 125 aaKnown RBP13.03□□□□□ -0.32
LRRC28-221ENST00000561276 N4BP2Q86UW6 1770 aaPredicted RBP13.02□□□□□ -0.32
LRRC28-221ENST00000561276 POLA2Q14181 598 aa13.02□□□□□ -0.33
LRRC28-221ENST00000561276 GCKRQ14397 625 aa13.02□□□□□ -0.33
LRRC28-221ENST00000561276 PRR5LQ6MZQ0 368 aa13.02□□□□□ -0.33
LRRC28-221ENST00000561276 NUTM1Q86Y26 1132 aa13.02□□□□□ -0.33
LRRC28-221ENST00000561276 SYNE4Q8N205 404 aa13.02□□□□□ -0.33
LRRC28-221ENST00000561276 CCDC24Q8N4L8 307 aa13.02□□□□□ -0.33
LRRC28-221ENST00000561276 ALDH1L1O75891 902 aa13.01□□□□□ -0.33
LRRC28-221ENST00000561276 NTSR2O95665 410 aa13.01□□□□□ -0.33
LRRC28-221ENST00000561276 ERFEQ4G0M1 354 aa13.01□□□□□ -0.33
LRRC28-221ENST00000561276 RTL5Q5HYW3 569 aaPredicted RBP13.01□□□□□ -0.33
LRRC28-221ENST00000561276 DZIP1LQ8IYY4 767 aaKnown RBP13.01□□□□□ -0.33
LRRC28-221ENST00000561276 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.01□□□□□ -0.33
LRRC28-221ENST00000561276 CNBD1Q8NA66 436 aa13.01□□□□□ -0.33
LRRC28-221ENST00000561276 JARID2Q92833 1246 aaPredicted RBP13.01□□□□□ -0.33
LRRC28-221ENST00000561276 FAM89AQ96GI7 184 aa13.01□□□□□ -0.33
LRRC28-221ENST00000561276 PPP1R1BQ9UD71 204 aaPredicted RBP13.01□□□□□ -0.33
LRRC28-221ENST00000561276 ANKRD31Q8N7Z5 1873 aa13□□□□□ -0.33
LRRC28-221ENST00000561276 KIF13BQ9NQT8 1826 aa13□□□□□ -0.33
LRRC28-221ENST00000561276 ABCC4O15439 1325 aa13□□□□□ -0.33
LRRC28-221ENST00000561276 H7C1W4 665 aa13□□□□□ -0.33
LRRC28-221ENST00000561276 MS4A1P11836 297 aa13□□□□□ -0.33
LRRC28-221ENST00000561276 CCT4P50991 539 aaKnown RBP13□□□□□ -0.33
LRRC28-221ENST00000561276 ST5P78524 1137 aa13□□□□□ -0.33
LRRC28-221ENST00000561276 INTS3Q68E01 1043 aaKnown RBP13□□□□□ -0.33
LRRC28-221ENST00000561276 ZBTB38Q8NAP3 1195 aaPredicted RBP13□□□□□ -0.33
LRRC28-221ENST00000561276 C9orf78Q9NZ63 289 aaPredicted RBP13□□□□□ -0.33
LRRC28-221ENST00000561276 DDX60Q8IY21 1712 aaKnown RBP12.99□□□□□ -0.33
LRRC28-221ENST00000561276 LRP5O75197 1615 aa12.99□□□□□ -0.33
LRRC28-221ENST00000561276 PXDNLA1KZ92 1463 aa12.99□□□□□ -0.33
LRRC28-221ENST00000561276 IBTKQ9P2D0 1353 aaPredicted RBP12.99□□□□□ -0.33
LRRC28-221ENST00000561276 RNF123Q5XPI4 1314 aa12.99□□□□□ -0.33
LRRC28-221ENST00000561276 SH3TC1Q8TE82 1336 aa12.99□□□□□ -0.33
LRRC28-221ENST00000561276 PCCAP05165 728 aaPredicted RBP12.99□□□□□ -0.33
LRRC28-221ENST00000561276 RLBP1P12271 317 aa12.99□□□□□ -0.33
LRRC28-221ENST00000561276 SLC10A5Q5PT55 438 aa12.99□□□□□ -0.33
LRRC28-221ENST00000561276 FTSJ3Q8IY81 847 aaKnown RBP12.99□□□□□ -0.33
LRRC28-221ENST00000561276 KLHL34Q8N239 644 aa12.99□□□□□ -0.33
LRRC28-221ENST00000561276 TMEM57Q8N5G2 664 aa12.99□□□□□ -0.33
LRRC28-221ENST00000561276 PANK1Q8TE04 598 aa12.99□□□□□ -0.33
LRRC28-221ENST00000561276 SUPT16HQ9Y5B9 1047 aaKnown RBP12.99□□□□□ -0.33
LRRC28-221ENST00000561276 LAMB2P55268 1798 aa12.99□□□□□ -0.33
LRRC28-221ENST00000561276 UBE3BQ7Z3V4 1068 aa12.98□□□□□ -0.33
LRRC28-221ENST00000561276 BRIP1Q9BX63 1249 aa12.98□□□□□ -0.33
LRRC28-221ENST00000561276 USP44Q9H0E7 712 aa12.98□□□□□ -0.33
LRRC28-221ENST00000561276 CD2APQ9Y5K6 639 aa12.98□□□□□ -0.33
LRRC28-221ENST00000561276 MYH3P11055 1940 aa12.98□□□□□ -0.33
LRRC28-221ENST00000561276 GRM8O00222 908 aa12.97□□□□□ -0.33
LRRC28-221ENST00000561276 IRS4O14654 1257 aaPredicted RBP12.97□□□□□ -0.33
LRRC28-221ENST00000561276 NBPF7P0C2Y1 421 aaPredicted RBP12.97□□□□□ -0.33
LRRC28-221ENST00000561276 HCLS1P14317 486 aaPredicted RBP12.97□□□□□ -0.33
LRRC28-221ENST00000561276 PDE6BP35913 854 aa12.97□□□□□ -0.33
LRRC28-221ENST00000561276 CASP7P55210 303 aa12.97□□□□□ -0.33
LRRC28-221ENST00000561276 RRP1P56182 461 aaKnown RBP12.97□□□□□ -0.33
LRRC28-221ENST00000561276 PDE3AQ14432 1141 aa12.97□□□□□ -0.33
LRRC28-221ENST00000561276 C20orf194Q5TEA3 1177 aa12.97□□□□□ -0.33
LRRC28-221ENST00000561276 FHDC1Q9C0D6 1143 aaPredicted RBP12.97□□□□□ -0.33
LRRC28-221ENST00000561276 CDHR2Q9BYE9 1310 aa12.96□□□□□ -0.33
LRRC28-221ENST00000561276 TGFB2P61812 414 aa12.96□□□□□ -0.33
LRRC28-221ENST00000561276 NLRP3Q96P20 1036 aa12.96□□□□□ -0.33
LRRC28-221ENST00000561276 SYT17Q9BSW7 474 aa12.96□□□□□ -0.33
LRRC28-221ENST00000561276 ABCC12Q96J65 1359 aa12.95□□□□□ -0.34
LRRC28-221ENST00000561276 UTYO14607 1347 aa12.95□□□□□ -0.34
LRRC28-221ENST00000561276 A0A0G2JLW4 131 aa12.95□□□□□ -0.34
LRRC28-221ENST00000561276 KLRG2A4D1S0 409 aaPredicted RBP12.95□□□□□ -0.34
LRRC28-221ENST00000561276 H0YIN7 160 aa12.95□□□□□ -0.34
LRRC28-221ENST00000561276 CENPBP07199 599 aaPredicted RBP12.95□□□□□ -0.34
LRRC28-221ENST00000561276 HSP90B1P14625 803 aaKnown RBP12.95□□□□□ -0.34
LRRC28-221ENST00000561276 ITPRIPQ8IWB1 547 aa12.95□□□□□ -0.34
LRRC28-221ENST00000561276 COG6Q9Y2V7 657 aa12.95□□□□□ -0.34
LRRC28-221ENST00000561276 KIAA1551Q9HCM1 1747 aa12.95□□□□□ -0.34
LRRC28-221ENST00000561276 TNRC6CQ9HCJ0 1690 aaKnown RBP12.95□□□□□ -0.34
LRRC28-221ENST00000561276 TAF1P21675 1872 aa12.95□□□□□ -0.34
LRRC28-221ENST00000561276 C10orf71Q711Q0 1435 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms