RNA–Protein interactions for RNA: ENST00000561217.1

TNFAIP2-211, Transcript of TNF alpha induced protein 2, humanhuman

TSL 3

Gene TNFAIP2, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-211ENST00000561217 MS4A3Q96HJ5 214 aa13.9□□□□□ -0.18
TNFAIP2-211ENST00000561217 ABHD8Q96I13 439 aa13.9□□□□□ -0.18
TNFAIP2-211ENST00000561217 FZD9O00144 591 aa13.89□□□□□ -0.19
TNFAIP2-211ENST00000561217 TRIM26Q12899 539 aaPredicted RBP13.89□□□□□ -0.19
TNFAIP2-211ENST00000561217 FAM161AQ3B820 660 aa13.89□□□□□ -0.19
TNFAIP2-211ENST00000561217 CLEC4GQ6UXB4 293 aa13.89□□□□□ -0.19
TNFAIP2-211ENST00000561217 CNTROBQ8N137 903 aa13.89□□□□□ -0.19
TNFAIP2-211ENST00000561217 USP16Q9Y5T5 823 aa13.89□□□□□ -0.19
TNFAIP2-211ENST00000561217 LTBP1Q14766 1721 aa13.89□□□□□ -0.19
TNFAIP2-211ENST00000561217 SNED1Q8TER0 1413 aa13.89□□□□□ -0.19
TNFAIP2-211ENST00000561217 WDR33Q9C0J8 1336 aaKnown RBP13.89□□□□□ -0.19
TNFAIP2-211ENST00000561217 PRAMEF22A3QJZ6 481 aa13.88□□□□□ -0.19
TNFAIP2-211ENST00000561217 PNMA8AQ86V59 439 aaPredicted RBP13.88□□□□□ -0.19
TNFAIP2-211ENST00000561217 COL4A5P29400 1685 aa13.88□□□□□ -0.19
TNFAIP2-211ENST00000561217 BTBD11A6QL63 1104 aa13.87□□□□□ -0.19
TNFAIP2-211ENST00000561217 U2SURPO15042 1029 aaKnown RBP13.87□□□□□ -0.19
TNFAIP2-211ENST00000561217 IARSP41252 1262 aaKnown RBP13.87□□□□□ -0.19
TNFAIP2-211ENST00000561217 MAP2K1Q02750 393 aaPredicted RBP13.87□□□□□ -0.19
TNFAIP2-211ENST00000561217 CC2D1BQ5T0F9 858 aaKnown RBP13.87□□□□□ -0.19
TNFAIP2-211ENST00000561217 RTKN2Q8IZC4 609 aa13.87□□□□□ -0.19
TNFAIP2-211ENST00000561217 ABT1Q9ULW3 272 aaKnown RBP13.87□□□□□ -0.19
TNFAIP2-211ENST00000561217 ZNF652Q9Y2D9 606 aa13.87□□□□□ -0.19
TNFAIP2-211ENST00000561217 KIF7Q2M1P5 1343 aa13.87□□□□□ -0.19
TNFAIP2-211ENST00000561217 PER1O15534 1290 aaPredicted RBP13.86□□□□□ -0.19
TNFAIP2-211ENST00000561217 GPC2Q8N158 579 aa13.86□□□□□ -0.19
TNFAIP2-211ENST00000561217 SYNE4Q8N205 404 aa13.86□□□□□ -0.19
TNFAIP2-211ENST00000561217 DDX21Q9NR30 783 aaKnown RBP eCLIP13.86□□□□□ -0.19
TNFAIP2-211ENST00000561217 TRPM7Q96QT4 1865 aa13.85□□□□□ -0.19
TNFAIP2-211ENST00000561217 FMR1Q06787 632 aaKnown RBP eCLIP13.85□□□□□ -0.19
TNFAIP2-211ENST00000561217 TPTE2Q6XPS3 522 aa13.85□□□□□ -0.19
TNFAIP2-211ENST00000561217 PLCD3Q8N3E9 789 aa13.85□□□□□ -0.19
TNFAIP2-211ENST00000561217 NIP7Q9Y221 180 aaKnown RBP eCLIP13.85□□□□□ -0.19
TNFAIP2-211ENST00000561217 FAM177BA6PVY3 158 aa13.84□□□□□ -0.19
TNFAIP2-211ENST00000561217 NBPF26B4DH59 902 aa13.84□□□□□ -0.19
TNFAIP2-211ENST00000561217 NBPF10Q6P3W6 841 aaKnown RBP13.84□□□□□ -0.19
TNFAIP2-211ENST00000561217 NBPF15Q8N660 670 aa13.84□□□□□ -0.19
TNFAIP2-211ENST00000561217 PHACTR3Q96KR7 559 aa13.84□□□□□ -0.19
TNFAIP2-211ENST00000561217 PSMD1Q99460 953 aa13.84□□□□□ -0.19
TNFAIP2-211ENST00000561217 ABCC12Q96J65 1359 aa13.83□□□□□ -0.19
TNFAIP2-211ENST00000561217 RGL2O15211 777 aa13.83□□□□□ -0.2
TNFAIP2-211ENST00000561217 SNRPA1P09661 255 aaKnown RBP13.83□□□□□ -0.2
TNFAIP2-211ENST00000561217 ALDH1B1P30837 517 aa13.83□□□□□ -0.2
TNFAIP2-211ENST00000561217 HLFQ16534 295 aa13.83□□□□□ -0.2
TNFAIP2-211ENST00000561217 CAPNS2Q96L46 248 aa13.83□□□□□ -0.2
TNFAIP2-211ENST00000561217 LAMB4A4D0S4 1761 aa13.83□□□□□ -0.2
TNFAIP2-211ENST00000561217 PRKAR2BP31323 418 aa13.82□□□□□ -0.2
TNFAIP2-211ENST00000561217 SCNN1DP51172 638 aa13.82□□□□□ -0.2
TNFAIP2-211ENST00000561217 CRY2Q49AN0 593 aa13.82□□□□□ -0.2
TNFAIP2-211ENST00000561217 PAXIP1Q6ZW49 1069 aaPredicted RBP13.82□□□□□ -0.2
TNFAIP2-211ENST00000561217 JDP2Q8WYK2 163 aa13.82□□□□□ -0.2
TNFAIP2-211ENST00000561217 PCGF6Q9BYE7 350 aa13.82□□□□□ -0.2
TNFAIP2-211ENST00000561217 RSPH6AQ9H0K4 717 aa13.82□□□□□ -0.2
TNFAIP2-211ENST00000561217 GJA3Q9Y6H8 435 aa13.82□□□□□ -0.2
TNFAIP2-211ENST00000561217 NUP98P52948 1817 aa13.81□□□□□ -0.2
TNFAIP2-211ENST00000561217 EPS15P42566 896 aa13.81□□□□□ -0.2
TNFAIP2-211ENST00000561217 GRM1Q13255 1194 aa13.81□□□□□ -0.2
TNFAIP2-211ENST00000561217 ASTLQ6HA08 431 aaPredicted RBP13.81□□□□□ -0.2
TNFAIP2-211ENST00000561217 CYP4F22Q6NT55 531 aa13.81□□□□□ -0.2
TNFAIP2-211ENST00000561217 SLC51AQ86UW1 340 aa13.81□□□□□ -0.2
TNFAIP2-211ENST00000561217 CCDC85CA6NKD9 419 aa13.8□□□□□ -0.2
TNFAIP2-211ENST00000561217 TRAF5O00463 557 aa13.8□□□□□ -0.2
TNFAIP2-211ENST00000561217 LMOD1P29536 600 aaPredicted RBP13.8□□□□□ -0.2
TNFAIP2-211ENST00000561217 ECE1P42892 770 aa13.8□□□□□ -0.2
TNFAIP2-211ENST00000561217 RGS19P49795 217 aa13.8□□□□□ -0.2
TNFAIP2-211ENST00000561217 EIF6P56537 245 aaKnown RBP13.8□□□□□ -0.2
TNFAIP2-211ENST00000561217 MLLT1Q03111 559 aaPredicted RBP13.8□□□□□ -0.2
TNFAIP2-211ENST00000561217 CNGB1Q14028 1251 aaPredicted RBP13.8□□□□□ -0.2
TNFAIP2-211ENST00000561217 CST9Q5W186 159 aa13.8□□□□□ -0.2
TNFAIP2-211ENST00000561217 MCM10Q7L590 875 aa13.8□□□□□ -0.2
TNFAIP2-211ENST00000561217 RASEFQ8IZ41 740 aa13.8□□□□□ -0.2
TNFAIP2-211ENST00000561217 GPR101Q96P66 508 aaPredicted RBP13.8□□□□□ -0.2
TNFAIP2-211ENST00000561217 BEGAINQ9BUH8 593 aa13.8□□□□□ -0.2
TNFAIP2-211ENST00000561217 TSKSQ9UJT2 592 aa13.8□□□□□ -0.2
TNFAIP2-211ENST00000561217 NPC1L1Q9UHC9 1359 aa13.8□□□□□ -0.2
TNFAIP2-211ENST00000561217 ATMINO43313 823 aaPredicted RBP13.79□□□□□ -0.2
TNFAIP2-211ENST00000561217 GTF2E1P29083 439 aaPredicted RBP13.79□□□□□ -0.2
TNFAIP2-211ENST00000561217 NUTM1Q86Y26 1132 aa13.79□□□□□ -0.2
TNFAIP2-211ENST00000561217 KIF12Q96FN5 646 aa13.79□□□□□ -0.2
TNFAIP2-211ENST00000561217 TLL2Q9Y6L7 1015 aa13.79□□□□□ -0.2
TNFAIP2-211ENST00000561217 RIC1Q4ADV7 1423 aa13.79□□□□□ -0.2
TNFAIP2-211ENST00000561217 POTEB2H3BUK9 544 aa13.78□□□□□ -0.2
TNFAIP2-211ENST00000561217 CC2D2BQ6DHV5 1058 aa13.78□□□□□ -0.2
TNFAIP2-211ENST00000561217 USP50Q70EL3 339 aaPredicted RBP13.78□□□□□ -0.2
TNFAIP2-211ENST00000561217 LARGE2Q8N3Y3 721 aa13.78□□□□□ -0.2
TNFAIP2-211ENST00000561217 CASP8AP2Q9UKL3 1982 aa13.78□□□□□ -0.2
TNFAIP2-211ENST00000561217 AOC2O75106 756 aa13.77□□□□□ -0.21
TNFAIP2-211ENST00000561217 HOXA10P31260 410 aaPredicted RBP13.77□□□□□ -0.21
TNFAIP2-211ENST00000561217 DCTN1Q14203 1278 aa13.77□□□□□ -0.21
TNFAIP2-211ENST00000561217 RTF1Q92541 710 aaKnown RBP13.77□□□□□ -0.21
TNFAIP2-211ENST00000561217 NYXQ9GZU5 481 aa13.77□□□□□ -0.21
TNFAIP2-211ENST00000561217 IBTKQ9P2D0 1353 aaPredicted RBP13.76□□□□□ -0.21
TNFAIP2-211ENST00000561217 UBN2Q6ZU65 1347 aa13.76□□□□□ -0.21
TNFAIP2-211ENST00000561217 RPGRQ92834 1020 aaKnown RBP13.76□□□□□ -0.21
TNFAIP2-211ENST00000561217 PPEF1O14829 653 aaPredicted RBP13.75□□□□□ -0.21
TNFAIP2-211ENST00000561217 MAP2K2P36507 400 aa13.75□□□□□ -0.21
TNFAIP2-211ENST00000561217 SAPCD2Q86UD0 394 aa13.75□□□□□ -0.21
TNFAIP2-211ENST00000561217 NIM1KQ8IY84 436 aa13.75□□□□□ -0.21
TNFAIP2-211ENST00000561217 NGEFQ8N5V2 710 aa13.75□□□□□ -0.21
TNFAIP2-211ENST00000561217 KDM3BQ7LBC6 1761 aa13.75□□□□□ -0.21
TNFAIP2-211ENST00000561217 TNRC18O15417 2968 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms