RNA–Protein interactions for RNA: ENST00000561204.5

MEIS3-211, Transcript of Meis homeobox 3, humanhuman

TSL 1 (best)

Gene MEIS3, Length 2,195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-211ENST00000561204 PDRG1Q9NUG6 133 aa20.9■□□□□ 0.94
MEIS3-211ENST00000561204 COL18A1P39060 1754 aa20.9■□□□□ 0.94
MEIS3-211ENST00000561204 STX6O43752 255 aa20.9■□□□□ 0.94
MEIS3-211ENST00000561204 NEXNQ0ZGT2 675 aa20.9■□□□□ 0.94
MEIS3-211ENST00000561204 LRP10Q7Z4F1 713 aa20.9■□□□□ 0.94
MEIS3-211ENST00000561204 METTL22Q9BUU2 404 aaPredicted RBP20.9■□□□□ 0.94
MEIS3-211ENST00000561204 MAP4K1Q92918 833 aa20.89■□□□□ 0.94
MEIS3-211ENST00000561204 MYD88Q99836 296 aa20.89■□□□□ 0.94
MEIS3-211ENST00000561204 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.89■□□□□ 0.94
MEIS3-211ENST00000561204 SMC3Q9UQE7 1217 aa20.89■□□□□ 0.94
MEIS3-211ENST00000561204 RBM8AQ9Y5S9 174 aaKnown RBP20.89■□□□□ 0.94
MEIS3-211ENST00000561204 CYP46A1Q9Y6A2 500 aa20.89■□□□□ 0.94
MEIS3-211ENST00000561204 MRC1P22897 1456 aa20.89■□□□□ 0.94
MEIS3-211ENST00000561204 SNRKQ9NRH2 765 aa20.89■□□□□ 0.93
MEIS3-211ENST00000561204 HIP1O00291 1037 aa20.88■□□□□ 0.93
MEIS3-211ENST00000561204 IFNL2Q8IZJ0 200 aa20.88■□□□□ 0.93
MEIS3-211ENST00000561204 SYAP1Q96A49 352 aaPredicted RBP20.88■□□□□ 0.93
MEIS3-211ENST00000561204 BOLA2Q9H3K6 86 aa20.88■□□□□ 0.93
MEIS3-211ENST00000561204 CNPY2Q9Y2B0 182 aa20.88■□□□□ 0.93
MEIS3-211ENST00000561204 HS1BP3Q53T59 392 aa20.87■□□□□ 0.93
MEIS3-211ENST00000561204 CREB3L3Q68CJ9 461 aa20.87■□□□□ 0.93
MEIS3-211ENST00000561204 CCDC83Q8IWF9 413 aa20.87■□□□□ 0.93
MEIS3-211ENST00000561204 USP16Q9Y5T5 823 aa20.87■□□□□ 0.93
MEIS3-211ENST00000561204 ANKRD13DQ6ZTN6 518 aa20.87■□□□□ 0.93
MEIS3-211ENST00000561204 DDX54Q8TDD1 881 aaKnown RBP20.87■□□□□ 0.93
MEIS3-211ENST00000561204 DNAJC5Q9H3Z4 198 aa20.87■□□□□ 0.93
MEIS3-211ENST00000561204 ABCC6O95255 1503 aa20.86■□□□□ 0.93
MEIS3-211ENST00000561204 A0A0D9SFI3 127 aa20.86■□□□□ 0.93
MEIS3-211ENST00000561204 F13A1P00488 732 aa20.86■□□□□ 0.93
MEIS3-211ENST00000561204 ST3GAL1Q11201 340 aa20.86■□□□□ 0.93
MEIS3-211ENST00000561204 RNF214Q8ND24 703 aa20.86■□□□□ 0.93
MEIS3-211ENST00000561204 ZSCAN31Q96LW9 406 aaPredicted RBP20.86■□□□□ 0.93
MEIS3-211ENST00000561204 CYP27B1O15528 508 aa20.86■□□□□ 0.93
MEIS3-211ENST00000561204 ZKSCAN1P17029 563 aaPredicted RBP20.86■□□□□ 0.93
MEIS3-211ENST00000561204 PIP4K2AP48426 406 aaPredicted RBP20.86■□□□□ 0.93
MEIS3-211ENST00000561204 TSPY26PQ9H489 355 aa20.86■□□□□ 0.93
MEIS3-211ENST00000561204 SH2B1Q9NRF2 756 aaPredicted RBP20.86■□□□□ 0.93
MEIS3-211ENST00000561204 DTNBO60941 627 aa20.85■□□□□ 0.93
MEIS3-211ENST00000561204 SNRPA1P09661 255 aaKnown RBP20.85■□□□□ 0.93
MEIS3-211ENST00000561204 GJB2P29033 226 aa20.85■□□□□ 0.93
MEIS3-211ENST00000561204 CABLES1Q8TDN4 633 aa20.85■□□□□ 0.93
MEIS3-211ENST00000561204 FSD1Q9BTV5 496 aa20.85■□□□□ 0.93
MEIS3-211ENST00000561204 SLC27A2O14975 620 aa20.85■□□□□ 0.93
MEIS3-211ENST00000561204 COL9A3Q14050 684 aaPredicted RBP20.85■□□□□ 0.93
MEIS3-211ENST00000561204 ME3Q16798 604 aa20.85■□□□□ 0.93
MEIS3-211ENST00000561204 JARID2Q92833 1246 aaPredicted RBP20.85■□□□□ 0.93
MEIS3-211ENST00000561204 DCAF5Q96JK2 942 aa20.85■□□□□ 0.93
MEIS3-211ENST00000561204 MED23Q9ULK4 1368 aa20.84■□□□□ 0.93
MEIS3-211ENST00000561204 CSB-PGBD3P0DP91 1061 aa20.84■□□□□ 0.93
MEIS3-211ENST00000561204 ATF3P18847 181 aa20.84■□□□□ 0.93
MEIS3-211ENST00000561204 KCNJ4P48050 445 aa20.84■□□□□ 0.93
MEIS3-211ENST00000561204 COPRSQ9NQ92 184 aa20.84■□□□□ 0.93
MEIS3-211ENST00000561204 RFX5P48382 616 aaPredicted RBP20.83■□□□□ 0.93
MEIS3-211ENST00000561204 TTC5Q8N0Z6 440 aa20.83■□□□□ 0.93
MEIS3-211ENST00000561204 MTMR6Q9Y217 621 aa20.83■□□□□ 0.93
MEIS3-211ENST00000561204 PHF14O94880 888 aa20.83■□□□□ 0.92
MEIS3-211ENST00000561204 CHRNA2Q15822 529 aa20.83■□□□□ 0.92
MEIS3-211ENST00000561204 TPCN1Q9ULQ1 816 aa20.83■□□□□ 0.92
MEIS3-211ENST00000561204 MSNP26038 577 aaKnown RBP20.82■□□□□ 0.92
MEIS3-211ENST00000561204 NECAB1Q8N987 351 aa20.82■□□□□ 0.92
MEIS3-211ENST00000561204 NOL7Q9UMY1 257 aaKnown RBP20.82■□□□□ 0.92
MEIS3-211ENST00000561204 AFDNP55196 1824 aaKnown RBP20.82■□□□□ 0.92
MEIS3-211ENST00000561204 PKD1L3Q7Z443 1732 aa20.82■□□□□ 0.92
MEIS3-211ENST00000561204 TMEM94Q12767 1356 aa20.82■□□□□ 0.92
MEIS3-211ENST00000561204 PTPN12Q05209 780 aaKnown RBP20.82■□□□□ 0.92
MEIS3-211ENST00000561204 FMNL2Q96PY5 1086 aa20.82■□□□□ 0.92
MEIS3-211ENST00000561204 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.82■□□□□ 0.92
MEIS3-211ENST00000561204 ATP6V1DQ9Y5K8 247 aa20.82■□□□□ 0.92
MEIS3-211ENST00000561204 ARFGEF2Q9Y6D5 1785 aa20.81■□□□□ 0.92
MEIS3-211ENST00000561204 JCADQ9P266 1359 aa20.81■□□□□ 0.92
MEIS3-211ENST00000561204 RABL6Q3YEC7 729 aaPredicted RBP20.81■□□□□ 0.92
MEIS3-211ENST00000561204 ZNF589Q86UQ0 364 aaPredicted RBP20.81■□□□□ 0.92
MEIS3-211ENST00000561204 EDC3Q96F86 508 aaKnown RBP20.81■□□□□ 0.92
MEIS3-211ENST00000561204 DBNLQ9UJU6 430 aaKnown RBP20.81■□□□□ 0.92
MEIS3-211ENST00000561204 TAF6LQ9Y6J9 622 aa20.81■□□□□ 0.92
MEIS3-211ENST00000561204 UBE2HP62256 183 aa20.8■□□□□ 0.92
MEIS3-211ENST00000561204 UBE3BQ7Z3V4 1068 aa20.8■□□□□ 0.92
MEIS3-211ENST00000561204 PLEKHG2Q9H7P9 1386 aa20.8■□□□□ 0.92
MEIS3-211ENST00000561204 GLI3P10071 1580 aa20.8■□□□□ 0.92
MEIS3-211ENST00000561204 PSMA5P28066 241 aa20.8■□□□□ 0.92
MEIS3-211ENST00000561204 STRCP1A6NGW2 1772 aa20.79■□□□□ 0.92
MEIS3-211ENST00000561204 FIBPO43427 364 aa20.79■□□□□ 0.92
MEIS3-211ENST00000561204 TFCP2Q12800 502 aa20.79■□□□□ 0.92
MEIS3-211ENST00000561204 TNNI3KQ59H18 835 aa20.79■□□□□ 0.92
MEIS3-211ENST00000561204 CCDC183Q5T5S1 534 aa20.79■□□□□ 0.92
MEIS3-211ENST00000561204 FPGT-TNNI3KV9GXZ4 949 aa20.79■□□□□ 0.92
MEIS3-211ENST00000561204 COL15A1P39059 1388 aa20.79■□□□□ 0.92
MEIS3-211ENST00000561204 TNS3Q68CZ2 1445 aa20.79■□□□□ 0.92
MEIS3-211ENST00000561204 ATP5J2-PTCD1G3V325 749 aa20.79■□□□□ 0.92
MEIS3-211ENST00000561204 PTCD1O75127 700 aaKnown RBP20.79■□□□□ 0.92
MEIS3-211ENST00000561204 ATP5JP18859 108 aa20.79■□□□□ 0.92
MEIS3-211ENST00000561204 DNM1Q05193 864 aaKnown RBP20.78■□□□□ 0.92
MEIS3-211ENST00000561204 RNF20Q5VTR2 975 aa20.78■□□□□ 0.92
MEIS3-211ENST00000561204 DCCP43146 1447 aa20.78■□□□□ 0.92
MEIS3-211ENST00000561204 TAF5LO75529 589 aa20.78■□□□□ 0.92
MEIS3-211ENST00000561204 CASP7P55210 303 aa20.78■□□□□ 0.92
MEIS3-211ENST00000561204 CABP4P57796 275 aa20.78■□□□□ 0.92
MEIS3-211ENST00000561204 RPS6KB1P23443 525 aa20.77■□□□□ 0.92
MEIS3-211ENST00000561204 TPRNQ4KMQ1 711 aa20.77■□□□□ 0.92
MEIS3-211ENST00000561204 BLOC1S2Q6QNY1 142 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms