RNA–Protein interactions for RNA: ENST00000561081.5

LRRC49-227, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-227ENST00000561081 RUFY2Q8WXA3 655 aa12.87□□□□□ -0.35
LRRC49-227ENST00000561081 CWC25Q9NXE8 425 aaPredicted RBP12.87□□□□□ -0.35
LRRC49-227ENST00000561081 CYP2E1P05181 493 aaPredicted RBP12.86□□□□□ -0.35
LRRC49-227ENST00000561081 KIAA1211Q6ZU35 1233 aa12.86□□□□□ -0.35
LRRC49-227ENST00000561081 PIGBQ92521 554 aa12.86□□□□□ -0.35
LRRC49-227ENST00000561081 COL16A1Q07092 1604 aaPredicted RBP12.86□□□□□ -0.35
LRRC49-227ENST00000561081 CCDC191Q8NCU4 936 aa12.85□□□□□ -0.35
LRRC49-227ENST00000561081 ZBTB3Q9H5J0 574 aa12.85□□□□□ -0.35
LRRC49-227ENST00000561081 ASAP1Q9ULH1 1129 aa12.85□□□□□ -0.35
LRRC49-227ENST00000561081 PLCH1Q4KWH8 1693 aa12.85□□□□□ -0.35
LRRC49-227ENST00000561081 ITGB4P16144 1822 aa12.85□□□□□ -0.35
LRRC49-227ENST00000561081 TFCP2Q12800 502 aa12.85□□□□□ -0.35
LRRC49-227ENST00000561081 CUL4AQ13619 759 aa12.85□□□□□ -0.35
LRRC49-227ENST00000561081 LMBR1LQ6UX01 489 aa12.85□□□□□ -0.35
LRRC49-227ENST00000561081 VSIG10Q8N0Z9 540 aa12.85□□□□□ -0.35
LRRC49-227ENST00000561081 UPF3BQ9BZI7 483 aaKnown RBP12.85□□□□□ -0.35
LRRC49-227ENST00000561081 SNX14Q9Y5W7 946 aa12.85□□□□□ -0.35
LRRC49-227ENST00000561081 PTMSP20962 102 aa12.85□□□□□ -0.35
LRRC49-227ENST00000561081 HIP1O00291 1037 aa12.84□□□□□ -0.35
LRRC49-227ENST00000561081 PKP1Q13835 747 aa12.84□□□□□ -0.35
LRRC49-227ENST00000561081 TNNI3KQ59H18 835 aa12.84□□□□□ -0.35
LRRC49-227ENST00000561081 TEX13AQ9BXU3 409 aaPredicted RBP12.84□□□□□ -0.35
LRRC49-227ENST00000561081 BOLA2Q9H3K6 86 aa12.84□□□□□ -0.35
LRRC49-227ENST00000561081 ATG3Q9NT62 314 aa12.84□□□□□ -0.35
LRRC49-227ENST00000561081 FPGT-TNNI3KV9GXZ4 949 aa12.84□□□□□ -0.35
LRRC49-227ENST00000561081 RASEFQ8IZ41 740 aa12.84□□□□□ -0.35
LRRC49-227ENST00000561081 DBNLQ9UJU6 430 aaKnown RBP12.84□□□□□ -0.35
LRRC49-227ENST00000561081 BAG4O95429 457 aaKnown RBP12.83□□□□□ -0.36
LRRC49-227ENST00000561081 LRP6O75581 1613 aa12.83□□□□□ -0.36
LRRC49-227ENST00000561081 PTH1RQ03431 593 aa12.83□□□□□ -0.36
LRRC49-227ENST00000561081 SNRKQ9NRH2 765 aa12.83□□□□□ -0.36
LRRC49-227ENST00000561081 ATP5JP18859 108 aa12.82□□□□□ -0.36
LRRC49-227ENST00000561081 DNAJC10Q8IXB1 793 aa12.82□□□□□ -0.36
LRRC49-227ENST00000561081 INTS4Q96HW7 963 aaKnown RBP12.82□□□□□ -0.36
LRRC49-227ENST00000561081 ISCA1Q9BUE6 129 aa12.82□□□□□ -0.36
LRRC49-227ENST00000561081 GZF1Q9H116 711 aaPredicted RBP12.82□□□□□ -0.36
LRRC49-227ENST00000561081 NMIQ13287 307 aaPredicted RBP12.82□□□□□ -0.36
LRRC49-227ENST00000561081 FAM227BQ96M60 508 aa12.82□□□□□ -0.36
LRRC49-227ENST00000561081 WNK3Q9BYP7 1800 aa12.82□□□□□ -0.36
LRRC49-227ENST00000561081 BCL9O00512 1426 aa12.82□□□□□ -0.36
LRRC49-227ENST00000561081 SKOR2Q2VWA4 1001 aaPredicted RBP12.82□□□□□ -0.36
LRRC49-227ENST00000561081 KCNB2Q92953 911 aa12.82□□□□□ -0.36
LRRC49-227ENST00000561081 TTC14Q96N46 770 aa12.82□□□□□ -0.36
LRRC49-227ENST00000561081 ZDHHC9Q9Y397 364 aa12.82□□□□□ -0.36
LRRC49-227ENST00000561081 STARD3NLO95772 234 aa12.81□□□□□ -0.36
LRRC49-227ENST00000561081 NOL8Q76FK4 1167 aaKnown RBP12.81□□□□□ -0.36
LRRC49-227ENST00000561081 FSD1Q9BTV5 496 aa12.81□□□□□ -0.36
LRRC49-227ENST00000561081 CHMP3Q9Y3E7 222 aa12.81□□□□□ -0.36
LRRC49-227ENST00000561081 CCDC171Q6TFL3 1326 aa12.81□□□□□ -0.36
LRRC49-227ENST00000561081 GOLGA6L22H0YM25 854 aa12.81□□□□□ -0.36
LRRC49-227ENST00000561081 TCIRG1Q13488 830 aa12.81□□□□□ -0.36
LRRC49-227ENST00000561081 ATG9AQ7Z3C6 839 aa12.81□□□□□ -0.36
LRRC49-227ENST00000561081 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.8□□□□□ -0.36
LRRC49-227ENST00000561081 A0A0D9SFI3 127 aa12.8□□□□□ -0.36
LRRC49-227ENST00000561081 TRIM28Q13263 835 aaKnown RBP12.8□□□□□ -0.36
LRRC49-227ENST00000561081 NECTIN1Q15223 517 aa12.8□□□□□ -0.36
LRRC49-227ENST00000561081 DBNDD2Q9BQY9 259 aa12.8□□□□□ -0.36
LRRC49-227ENST00000561081 FSD2A1L4K1 749 aa12.8□□□□□ -0.36
LRRC49-227ENST00000561081 EXOC5O00471 708 aa12.8□□□□□ -0.36
LRRC49-227ENST00000561081 PRPF40BQ6NWY9 871 aaKnown RBP12.8□□□□□ -0.36
LRRC49-227ENST00000561081 KIF6Q6ZMV9 814 aa12.8□□□□□ -0.36
LRRC49-227ENST00000561081 MAP4K1Q92918 833 aa12.8□□□□□ -0.36
LRRC49-227ENST00000561081 LTBP4Q8N2S1 1624 aa12.79□□□□□ -0.36
LRRC49-227ENST00000561081 MED23Q9ULK4 1368 aa12.79□□□□□ -0.36
LRRC49-227ENST00000561081 ZNF330Q9Y3S2 320 aaPredicted RBP12.79□□□□□ -0.36
LRRC49-227ENST00000561081 IL15P40933 162 aaPredicted RBP12.79□□□□□ -0.36
LRRC49-227ENST00000561081 L1TD1Q5T7N2 865 aaKnown RBP12.79□□□□□ -0.36
LRRC49-227ENST00000561081 EDC3Q96F86 508 aaKnown RBP12.79□□□□□ -0.36
LRRC49-227ENST00000561081 SLC4A9Q96Q91 983 aa12.79□□□□□ -0.36
LRRC49-227ENST00000561081 GPR108Q9NPR9 543 aa12.79□□□□□ -0.36
LRRC49-227ENST00000561081 CASTP20810 708 aaKnown RBP12.78□□□□□ -0.36
LRRC49-227ENST00000561081 HAUS7Q99871 368 aa12.78□□□□□ -0.36
LRRC49-227ENST00000561081 TM6SF1Q9BZW5 370 aa12.78□□□□□ -0.36
LRRC49-227ENST00000561081 RBM8AQ9Y5S9 174 aaKnown RBP12.78□□□□□ -0.36
LRRC49-227ENST00000561081 RFX7Q2KHR2 1363 aa12.78□□□□□ -0.36
LRRC49-227ENST00000561081 JCADQ9P266 1359 aa12.78□□□□□ -0.36
LRRC49-227ENST00000561081 AK2P54819 239 aa12.78□□□□□ -0.36
LRRC49-227ENST00000561081 MCTP1Q6DN14 999 aa12.78□□□□□ -0.36
LRRC49-227ENST00000561081 MAP3K15Q6ZN16 1313 aa12.78□□□□□ -0.36
LRRC49-227ENST00000561081 GOLGA6L3A6NEY3 463 aa12.77□□□□□ -0.36
LRRC49-227ENST00000561081 EYA2O00167 538 aa12.77□□□□□ -0.36
LRRC49-227ENST00000561081 CIAO1O76071 339 aa12.77□□□□□ -0.36
LRRC49-227ENST00000561081 CYP19A1P11511 503 aaPredicted RBP12.77□□□□□ -0.36
LRRC49-227ENST00000561081 ADCK5Q3MIX3 580 aa12.77□□□□□ -0.36
LRRC49-227ENST00000561081 RUFY3Q7L099 469 aa12.77□□□□□ -0.36
LRRC49-227ENST00000561081 ZSWIM6Q9HCJ5 1215 aa12.77□□□□□ -0.36
LRRC49-227ENST00000561081 BRD1O95696 1058 aa12.77□□□□□ -0.37
LRRC49-227ENST00000561081 LRRC24Q50LG9 513 aa12.77□□□□□ -0.37
LRRC49-227ENST00000561081 CREB3L3Q68CJ9 461 aa12.77□□□□□ -0.37
LRRC49-227ENST00000561081 ZNF594Q96JF6 807 aaPredicted RBP12.77□□□□□ -0.37
LRRC49-227ENST00000561081 JAKMIP1Q96N16 626 aaKnown RBP12.77□□□□□ -0.37
LRRC49-227ENST00000561081 BRPF3Q9ULD4 1205 aa12.77□□□□□ -0.37
LRRC49-227ENST00000561081 NRAPQ86VF7 1730 aa12.77□□□□□ -0.37
LRRC49-227ENST00000561081 PCCAP05165 728 aaPredicted RBP12.77□□□□□ -0.37
LRRC49-227ENST00000561081 CPA1P15085 419 aa12.77□□□□□ -0.37
LRRC49-227ENST00000561081 LIMCH1Q9UPQ0 1083 aa12.77□□□□□ -0.37
LRRC49-227ENST00000561081 PHLPP1O60346 1717 aa12.76□□□□□ -0.37
LRRC49-227ENST00000561081 ZKSCAN1P17029 563 aaPredicted RBP12.76□□□□□ -0.37
LRRC49-227ENST00000561081 VPS53Q5VIR6 699 aa12.76□□□□□ -0.37
LRRC49-227ENST00000561081 GIGYF2Q6Y7W6 1299 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms