RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 TMX4Q9H1E5 349 aaPredicted RBP2.65□□□□□ -1.99
RTF1-207ENST00000561076 TSPAN10Q9H1Z9 355 aaPredicted RBP2.65□□□□□ -1.99
RTF1-207ENST00000561076 ZNF408Q9H9D4 720 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 SRA1Q9HD15 236 aaKnown RBP2.65□□□□□ -1.99
RTF1-207ENST00000561076 MCM8Q9UJA3 840 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 EFR3BQ9Y2G0 817 aa2.65□□□□□ -1.99
RTF1-207ENST00000561076 MINDY4BA8MYZ0 360 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 MAFGO15525 162 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 TRIM37O94972 964 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 PDGFAP04085 211 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 USP17L7P0C7H9 530 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 RLBP1P12271 317 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 SOX5P35711 763 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 ORC1Q13415 861 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 RAB33AQ14088 237 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 TCEA2Q15560 299 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 C11orf91Q3C1V1 193 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 MTERF2Q49AM1 385 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 COX20Q5RI15 118 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 C16orf86Q6ZW13 317 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 LAPTM4BQ86VI4 370 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 ATCAYQ86WG3 371 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 POTEDQ86YR6 584 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 GJD3Q8N144 294 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 NKX2-3Q8TAU0 364 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 TRPM4Q8TD43 1214 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 GPR152Q8TDT2 470 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 HNRNPLLQ8WVV9 542 aaKnown RBP2.64□□□□□ -1.99
RTF1-207ENST00000561076 RELTQ969Z4 430 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 IFT43Q96FT9 208 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 C8orf48Q96LL4 319 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 MPHOSPH6Q99547 160 aaKnown RBP2.64□□□□□ -1.99
RTF1-207ENST00000561076 FEZ1Q99689 392 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 ZBED2Q9BTP6 218 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 RBSNQ9H1K0 784 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 BSDC1Q9NW68 430 aaPredicted RBP2.64□□□□□ -1.99
RTF1-207ENST00000561076 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.64□□□□□ -1.99
RTF1-207ENST00000561076 PCDH10Q9P2E7 1040 aa2.64□□□□□ -1.99
RTF1-207ENST00000561076 FNDC3AQ9Y2H6 1198 aaKnown RBP2.64□□□□□ -1.99
RTF1-207ENST00000561076 USP31Q70CQ4 1352 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 ESYT3A0FGR9 886 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 SERTM1A2A2V5 107 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 ALG1L2C9J202 215 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 OPLAHO14841 1288 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 MYL1P05976 194 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 CTSHP09668 335 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 ATF3P18847 181 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 PAX3P23760 479 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 GSTT1P30711 240 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 ETFBP38117 255 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 AMPD3Q01432 767 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 EXOSC10Q01780 885 aaKnown RBP2.63□□□□□ -1.99
RTF1-207ENST00000561076 SERINC3Q13530 473 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 DGKZQ13574 1117 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 CCDC85BQ15834 202 aaPredicted RBP2.63□□□□□ -1.99
RTF1-207ENST00000561076 HIF1AQ16665 826 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 LINC01559Q495D7 138 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 ERFEQ4G0M1 354 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 MSS51Q4VC12 460 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 TBCELQ5QJ74 424 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 SNAP47Q5SQN1 464 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 MEI1Q5TIA1 1274 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 SLC4A10Q6U841 1118 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 PDZRN4Q6ZMN7 1036 aaPredicted RBP2.63□□□□□ -1.99
RTF1-207ENST00000561076 VASH1Q7L8A9 365 aaPredicted RBP2.63□□□□□ -1.99
RTF1-207ENST00000561076 SH3BP5LQ7L8J4 393 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 CYP2U1Q7Z449 544 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 SLC9A9Q8IVB4 645 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 SCUBE3Q8IX30 993 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 MRPL50Q8N5N7 158 aaKnown RBP2.63□□□□□ -1.99
RTF1-207ENST00000561076 GPATCH11Q8N954 259 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 ATL2Q8NHH9 583 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 RASGRP4Q8TDF6 673 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 CHAC2Q8WUX2 184 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 NUDT16Q96DE0 195 aaKnown RBP2.63□□□□□ -1.99
RTF1-207ENST00000561076 IPO9Q96P70 1041 aaKnown RBP2.63□□□□□ -1.99
RTF1-207ENST00000561076 TRERF1Q96PN7 1200 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 FERD3LQ96RJ6 166 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 DNAJC7Q99615 494 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 SPSB2Q99619 263 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 SRRTQ9BXP5 876 aaKnown RBP2.63□□□□□ -1.99
RTF1-207ENST00000561076 KBTBD4Q9NVX7 518 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 ACTR10Q9NZ32 417 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 PRKAG3Q9UGI9 489 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 METRNQ9UJH8 293 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 PNMA2Q9UL42 364 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 SUPT16HQ9Y5B9 1047 aaKnown RBP2.63□□□□□ -1.99
RTF1-207ENST00000561076 EID1Q9Y6B2 187 aa2.63□□□□□ -1.99
RTF1-207ENST00000561076 A0A1W2PRU2 124 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 GOLGA6CA6NDK9 693 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 GOLGA6BA6NDN3 693 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 A6NJY4 79 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 TNFRSF10BO14763 440 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 PDPK1O15530 556 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 PHACTR2O75167 634 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 DXOO77932 396 aaKnown RBP2.62□□□□□ -1.99
RTF1-207ENST00000561076 FOSP01100 380 aaPredicted RBP2.62□□□□□ -1.99
RTF1-207ENST00000561076 APPP05067 770 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 INHAP05111 366 aa2.62□□□□□ -1.99
RTF1-207ENST00000561076 GOLGA6DP0CG33 693 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms