RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 NMIQ13287 307 aaPredicted RBP17.59■□□□□ 0.41
CRTC3-210ENST00000560927 JAKMIP1Q96N16 626 aaKnown RBP17.59■□□□□ 0.41
CRTC3-210ENST00000560927 PPP1R9BQ96SB3 815 aa17.59■□□□□ 0.41
CRTC3-210ENST00000560927 TNS3Q68CZ2 1445 aa17.59■□□□□ 0.41
CRTC3-210ENST00000560927 CCDC171Q6TFL3 1326 aa17.59■□□□□ 0.41
CRTC3-210ENST00000560927 WDR33Q9C0J8 1336 aaKnown RBP17.59■□□□□ 0.41
CRTC3-210ENST00000560927 CCDC173Q0VFZ6 552 aa17.59■□□□□ 0.41
CRTC3-210ENST00000560927 NECTIN1Q15223 517 aa17.58■□□□□ 0.41
CRTC3-210ENST00000560927 MRC1P22897 1456 aa17.58■□□□□ 0.4
CRTC3-210ENST00000560927 MBD3O95983 291 aa17.58■□□□□ 0.4
CRTC3-210ENST00000560927 COL9A3Q14050 684 aaPredicted RBP17.58■□□□□ 0.4
CRTC3-210ENST00000560927 FMNL2Q96PY5 1086 aa17.58■□□□□ 0.4
CRTC3-210ENST00000560927 A0A0D9SFI3 127 aa17.57■□□□□ 0.4
CRTC3-210ENST00000560927 GADD45BO75293 160 aaPredicted RBP17.57■□□□□ 0.4
CRTC3-210ENST00000560927 KCNB2Q92953 911 aa17.57■□□□□ 0.4
CRTC3-210ENST00000560927 RBM8AQ9Y5S9 174 aaKnown RBP17.57■□□□□ 0.4
CRTC3-210ENST00000560927 DCCP43146 1447 aa17.57■□□□□ 0.4
CRTC3-210ENST00000560927 ATP5J2-PTCD1G3V325 749 aa17.57■□□□□ 0.4
CRTC3-210ENST00000560927 PTCD1O75127 700 aaKnown RBP17.57■□□□□ 0.4
CRTC3-210ENST00000560927 ZSWIM6Q9HCJ5 1215 aa17.57■□□□□ 0.4
CRTC3-210ENST00000560927 PDRG1Q9NUG6 133 aa17.57■□□□□ 0.4
CRTC3-210ENST00000560927 CABP4P57796 275 aa17.56■□□□□ 0.4
CRTC3-210ENST00000560927 LRSAM1Q6UWE0 723 aa17.56■□□□□ 0.4
CRTC3-210ENST00000560927 UBE3BQ7Z3V4 1068 aa17.56■□□□□ 0.4
CRTC3-210ENST00000560927 EDC3Q96F86 508 aaKnown RBP17.56■□□□□ 0.4
CRTC3-210ENST00000560927 SPATA31A3Q5VYP0 1347 aa17.56■□□□□ 0.4
CRTC3-210ENST00000560927 PRKCSHP14314 528 aaPredicted RBP17.56■□□□□ 0.4
CRTC3-210ENST00000560927 SYT1P21579 422 aa17.56■□□□□ 0.4
CRTC3-210ENST00000560927 RFX5P48382 616 aaPredicted RBP17.56■□□□□ 0.4
CRTC3-210ENST00000560927 VPS53Q5VIR6 699 aa17.56■□□□□ 0.4
CRTC3-210ENST00000560927 CREB3L3Q68CJ9 461 aa17.56■□□□□ 0.4
CRTC3-210ENST00000560927 USP48Q86UV5 1035 aa17.56■□□□□ 0.4
CRTC3-210ENST00000560927 CADPS2Q86UW7 1296 aa17.56■□□□□ 0.4
CRTC3-210ENST00000560927 MAP4K1Q92918 833 aa17.56■□□□□ 0.4
CRTC3-210ENST00000560927 FSD1Q9BTV5 496 aa17.56■□□□□ 0.4
CRTC3-210ENST00000560927 ABCC6O95255 1503 aa17.56■□□□□ 0.4
CRTC3-210ENST00000560927 PTPN12Q05209 780 aaKnown RBP17.55■□□□□ 0.4
CRTC3-210ENST00000560927 CCDC83Q8IWF9 413 aa17.55■□□□□ 0.4
CRTC3-210ENST00000560927 ANP32BQ92688 251 aaKnown RBP17.55■□□□□ 0.4
CRTC3-210ENST00000560927 TM6SF1Q9BZW5 370 aa17.55■□□□□ 0.4
CRTC3-210ENST00000560927 COPRSQ9NQ92 184 aa17.55■□□□□ 0.4
CRTC3-210ENST00000560927 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.55■□□□□ 0.4
CRTC3-210ENST00000560927 CYP46A1Q9Y6A2 500 aa17.55■□□□□ 0.4
CRTC3-210ENST00000560927 PKD1L3Q7Z443 1732 aa17.54■□□□□ 0.4
CRTC3-210ENST00000560927 STX6O43752 255 aa17.54■□□□□ 0.4
CRTC3-210ENST00000560927 ZSCAN22P10073 491 aaPredicted RBP17.54■□□□□ 0.4
CRTC3-210ENST00000560927 ST3GAL1Q11201 340 aa17.54■□□□□ 0.4
CRTC3-210ENST00000560927 SMC3Q9UQE7 1217 aa17.54■□□□□ 0.4
CRTC3-210ENST00000560927 GLI3P10071 1580 aa17.54■□□□□ 0.4
CRTC3-210ENST00000560927 HIP1O00291 1037 aa17.54■□□□□ 0.4
CRTC3-210ENST00000560927 KCNJ4P48050 445 aa17.54■□□□□ 0.4
CRTC3-210ENST00000560927 TFCP2Q12800 502 aa17.54■□□□□ 0.4
CRTC3-210ENST00000560927 SNRKQ9NRH2 765 aa17.54■□□□□ 0.4
CRTC3-210ENST00000560927 DBNLQ9UJU6 430 aaKnown RBP17.54■□□□□ 0.4
CRTC3-210ENST00000560927 TAF6LQ9Y6J9 622 aa17.54■□□□□ 0.4
CRTC3-210ENST00000560927 A0A087WZG4 1122 aa17.53■□□□□ 0.4
CRTC3-210ENST00000560927 ZKSCAN1P17029 563 aaPredicted RBP17.53■□□□□ 0.4
CRTC3-210ENST00000560927 ZNF589Q86UQ0 364 aaPredicted RBP17.53■□□□□ 0.4
CRTC3-210ENST00000560927 CNPY2Q9Y2B0 182 aa17.53■□□□□ 0.4
CRTC3-210ENST00000560927 NDUFB9Q9Y6M9 179 aa17.53■□□□□ 0.4
CRTC3-210ENST00000560927 SLC27A2O14975 620 aa17.53■□□□□ 0.4
CRTC3-210ENST00000560927 ME3Q16798 604 aa17.53■□□□□ 0.4
CRTC3-210ENST00000560927 RABL6Q3YEC7 729 aaPredicted RBP17.53■□□□□ 0.4
CRTC3-210ENST00000560927 TCHHQ07283 1943 aa17.52■□□□□ 0.4
CRTC3-210ENST00000560927 TNNI3KQ59H18 835 aa17.52■□□□□ 0.4
CRTC3-210ENST00000560927 FPGT-TNNI3KV9GXZ4 949 aa17.52■□□□□ 0.4
CRTC3-210ENST00000560927 CPDO75976 1380 aa17.52■□□□□ 0.39
CRTC3-210ENST00000560927 MED23Q9ULK4 1368 aa17.52■□□□□ 0.39
CRTC3-210ENST00000560927 NBPF26B4DH59 902 aa17.52■□□□□ 0.39
CRTC3-210ENST00000560927 GJB2P29033 226 aa17.52■□□□□ 0.39
CRTC3-210ENST00000560927 NBPF14Q5TI25 921 aa17.52■□□□□ 0.39
CRTC3-210ENST00000560927 NBPF10Q6P3W6 841 aaKnown RBP17.52■□□□□ 0.39
CRTC3-210ENST00000560927 NBPF15Q8N660 670 aa17.52■□□□□ 0.39
CRTC3-210ENST00000560927 ARFGEF2Q9Y6D5 1785 aa17.51■□□□□ 0.39
CRTC3-210ENST00000560927 CASP7P55210 303 aa17.51■□□□□ 0.39
CRTC3-210ENST00000560927 NECAB1Q8N987 351 aa17.51■□□□□ 0.39
CRTC3-210ENST00000560927 TPCN1Q9ULQ1 816 aa17.51■□□□□ 0.39
CRTC3-210ENST00000560927 AFDNP55196 1824 aaKnown RBP17.51■□□□□ 0.39
CRTC3-210ENST00000560927 F13A1P00488 732 aa17.5■□□□□ 0.39
CRTC3-210ENST00000560927 CHGBP05060 677 aa17.5■□□□□ 0.39
CRTC3-210ENST00000560927 HSPA2P54652 639 aa17.5■□□□□ 0.39
CRTC3-210ENST00000560927 PLBD2Q8NHP8 589 aa17.5■□□□□ 0.39
CRTC3-210ENST00000560927 TCEANC2Q96MN5 208 aa17.5■□□□□ 0.39
CRTC3-210ENST00000560927 TPRNQ4KMQ1 711 aa17.5■□□□□ 0.39
CRTC3-210ENST00000560927 TMEM87AQ8NBN3 555 aa17.5■□□□□ 0.39
CRTC3-210ENST00000560927 RNF214Q8ND24 703 aa17.5■□□□□ 0.39
CRTC3-210ENST00000560927 PLEKHG2Q9H7P9 1386 aa17.5■□□□□ 0.39
CRTC3-210ENST00000560927 ZSCAN31Q96LW9 406 aaPredicted RBP17.49■□□□□ 0.39
CRTC3-210ENST00000560927 SH2B1Q9NRF2 756 aaPredicted RBP17.49■□□□□ 0.39
CRTC3-210ENST00000560927 ATP5JP18859 108 aa17.49■□□□□ 0.39
CRTC3-210ENST00000560927 PDLIM2Q96JY6 352 aa17.49■□□□□ 0.39
CRTC3-210ENST00000560927 COL15A1P39059 1388 aa17.49■□□□□ 0.39
CRTC3-210ENST00000560927 LMBR1LQ6UX01 489 aa17.48■□□□□ 0.39
CRTC3-210ENST00000560927 TTLL7Q6ZT98 887 aa17.48■□□□□ 0.39
CRTC3-210ENST00000560927 BRINP3Q76B58 766 aa17.48■□□□□ 0.39
CRTC3-210ENST00000560927 DBNDD2Q9BQY9 259 aa17.48■□□□□ 0.39
CRTC3-210ENST00000560927 MTMR6Q9Y217 621 aa17.48■□□□□ 0.39
CRTC3-210ENST00000560927 TAF5LO75529 589 aa17.47■□□□□ 0.39
CRTC3-210ENST00000560927 TOM1L2Q6ZVM7 507 aa17.47■□□□□ 0.39
CRTC3-210ENST00000560927 PRDM11Q9NQV5 511 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms