RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 SMC4Q9NTJ3 1288 aa9.02□□□□□ -0.97
CTDSPL2-210ENST00000560834 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.01□□□□□ -0.97
CTDSPL2-210ENST00000560834 BCAR3O75815 825 aa9.01□□□□□ -0.97
CTDSPL2-210ENST00000560834 PHF14O94880 888 aa9.01□□□□□ -0.97
CTDSPL2-210ENST00000560834 TTLL7Q6ZT98 887 aa9.01□□□□□ -0.97
CTDSPL2-210ENST00000560834 XAGE3Q8WTP9 111 aa9.01□□□□□ -0.97
CTDSPL2-210ENST00000560834 HYPKQ9NX55 129 aa9.01□□□□□ -0.97
CTDSPL2-210ENST00000560834 STK32BQ9NY57 414 aa9.01□□□□□ -0.97
CTDSPL2-210ENST00000560834 RCAN3Q9UKA8 241 aa9.01□□□□□ -0.97
CTDSPL2-210ENST00000560834 RTCBQ9Y3I0 505 aaKnown RBP9.01□□□□□ -0.97
CTDSPL2-210ENST00000560834 KIF16BQ96L93 1317 aa9.01□□□□□ -0.97
CTDSPL2-210ENST00000560834 USP42Q9H9J4 1324 aaKnown RBP9.01□□□□□ -0.97
CTDSPL2-210ENST00000560834 ATP10DQ9P241 1426 aa9□□□□□ -0.97
CTDSPL2-210ENST00000560834 HMGB2P26583 209 aaKnown RBP9□□□□□ -0.97
CTDSPL2-210ENST00000560834 FLIIQ13045 1269 aa9□□□□□ -0.97
CTDSPL2-210ENST00000560834 TPRNQ4KMQ1 711 aa9□□□□□ -0.97
CTDSPL2-210ENST00000560834 CHMP4AQ9BY43 222 aa9□□□□□ -0.97
CTDSPL2-210ENST00000560834 RYDENQ9NUL5 291 aaKnown RBP9□□□□□ -0.97
CTDSPL2-210ENST00000560834 TFCP2L1Q9NZI6 479 aa9□□□□□ -0.97
CTDSPL2-210ENST00000560834 ZNF330Q9Y3S2 320 aaPredicted RBP9□□□□□ -0.97
CTDSPL2-210ENST00000560834 STK24Q9Y6E0 443 aa9□□□□□ -0.97
CTDSPL2-210ENST00000560834 MAP3K15Q6ZN16 1313 aa9□□□□□ -0.97
CTDSPL2-210ENST00000560834 CAMTA2O94983 1202 aa8.99□□□□□ -0.97
CTDSPL2-210ENST00000560834 COPS6Q7L5N1 327 aa8.99□□□□□ -0.97
CTDSPL2-210ENST00000560834 DZIP3Q86Y13 1208 aaKnown RBP8.99□□□□□ -0.97
CTDSPL2-210ENST00000560834 COL23A1Q86Y22 540 aaPredicted RBP8.99□□□□□ -0.97
CTDSPL2-210ENST00000560834 ARHGEF1Q92888 912 aaKnown RBP8.99□□□□□ -0.97
CTDSPL2-210ENST00000560834 PDGFDQ9GZP0 370 aaPredicted RBP8.99□□□□□ -0.97
CTDSPL2-210ENST00000560834 BCL2L12Q9HB09 334 aa8.99□□□□□ -0.97
CTDSPL2-210ENST00000560834 SRP68Q9UHB9 627 aaKnown RBP8.99□□□□□ -0.97
CTDSPL2-210ENST00000560834 TNRC6CQ9HCJ0 1690 aaKnown RBP8.99□□□□□ -0.97
CTDSPL2-210ENST00000560834 DDX60Q8IY21 1712 aaKnown RBP8.99□□□□□ -0.97
CTDSPL2-210ENST00000560834 PTPRCP08575 1304 aa8.99□□□□□ -0.97
CTDSPL2-210ENST00000560834 A0A087WZG4 1122 aa8.98□□□□□ -0.97
CTDSPL2-210ENST00000560834 AIMP1Q12904 312 aaKnown RBP8.98□□□□□ -0.97
CTDSPL2-210ENST00000560834 KIF6Q6ZMV9 814 aa8.98□□□□□ -0.97
CTDSPL2-210ENST00000560834 ZBTB3Q9H5J0 574 aa8.98□□□□□ -0.97
CTDSPL2-210ENST00000560834 NARFQ9UHQ1 456 aa8.98□□□□□ -0.97
CTDSPL2-210ENST00000560834 TBC1D2BQ9UPU7 963 aa8.98□□□□□ -0.97
CTDSPL2-210ENST00000560834 TNNQ9UQP3 1299 aa8.98□□□□□ -0.97
CTDSPL2-210ENST00000560834 ABCC4O15439 1325 aa8.98□□□□□ -0.97
CTDSPL2-210ENST00000560834 RNF123Q5XPI4 1314 aa8.98□□□□□ -0.97
CTDSPL2-210ENST00000560834 KIAA1551Q9HCM1 1747 aa8.97□□□□□ -0.97
CTDSPL2-210ENST00000560834 KIF13BQ9NQT8 1826 aa8.97□□□□□ -0.97
CTDSPL2-210ENST00000560834 GYS1P13807 737 aa8.97□□□□□ -0.97
CTDSPL2-210ENST00000560834 TRIM27P14373 513 aa8.97□□□□□ -0.97
CTDSPL2-210ENST00000560834 FKBP5Q13451 457 aaPredicted RBP8.97□□□□□ -0.97
CTDSPL2-210ENST00000560834 R3HDM1Q15032 1099 aaKnown RBP8.97□□□□□ -0.97
CTDSPL2-210ENST00000560834 HLFQ16534 295 aa8.97□□□□□ -0.97
CTDSPL2-210ENST00000560834 TRAPPC3LQ5T215 181 aa8.97□□□□□ -0.97
CTDSPL2-210ENST00000560834 USPL1Q5W0Q7 1092 aa8.97□□□□□ -0.97
CTDSPL2-210ENST00000560834 FLAD1Q8NFF5 587 aa8.97□□□□□ -0.97
CTDSPL2-210ENST00000560834 PLBD2Q8NHP8 589 aa8.97□□□□□ -0.97
CTDSPL2-210ENST00000560834 NOB1Q9ULX3 412 aaKnown RBP8.97□□□□□ -0.97
CTDSPL2-210ENST00000560834 ANKRD31Q8N7Z5 1873 aa8.97□□□□□ -0.97
CTDSPL2-210ENST00000560834 COL11A2P13942 1736 aaPredicted RBP8.97□□□□□ -0.97
CTDSPL2-210ENST00000560834 LRP5O75197 1615 aa8.96□□□□□ -0.98
CTDSPL2-210ENST00000560834 PI4KAP2A4QPH2 592 aa8.96□□□□□ -0.98
CTDSPL2-210ENST00000560834 PSDA5PKW4 1024 aaPredicted RBP8.96□□□□□ -0.98
CTDSPL2-210ENST00000560834 ERVV-1B6SEH8 477 aa8.96□□□□□ -0.98
CTDSPL2-210ENST00000560834 F6X3S4 739 aa8.96□□□□□ -0.98
CTDSPL2-210ENST00000560834 DDX58O95786 925 aaKnown RBP8.96□□□□□ -0.98
CTDSPL2-210ENST00000560834 RFC4P35249 363 aa8.96□□□□□ -0.98
CTDSPL2-210ENST00000560834 RRP1P56182 461 aaKnown RBP8.96□□□□□ -0.98
CTDSPL2-210ENST00000560834 NBR1Q14596 966 aa8.96□□□□□ -0.98
CTDSPL2-210ENST00000560834 KSR2Q6VAB6 950 aa8.96□□□□□ -0.98
CTDSPL2-210ENST00000560834 GIGYF2Q6Y7W6 1299 aaKnown RBP8.96□□□□□ -0.98
CTDSPL2-210ENST00000560834 PI4KAP1Q8N8J0 262 aa8.96□□□□□ -0.98
CTDSPL2-210ENST00000560834 MAP3K2Q9Y2U5 619 aa8.96□□□□□ -0.98
CTDSPL2-210ENST00000560834 UBN2Q6ZU65 1347 aa8.96□□□□□ -0.98
CTDSPL2-210ENST00000560834 IBTKQ9P2D0 1353 aaPredicted RBP8.96□□□□□ -0.98
CTDSPL2-210ENST00000560834 DLEC1Q9Y238 1755 aa8.95□□□□□ -0.98
CTDSPL2-210ENST00000560834 ZKSCAN2Q63HK3 967 aa8.95□□□□□ -0.98
CTDSPL2-210ENST00000560834 ATF7IPQ6VMQ6 1270 aa8.95□□□□□ -0.98
CTDSPL2-210ENST00000560834 ANKRD13DQ6ZTN6 518 aa8.95□□□□□ -0.98
CTDSPL2-210ENST00000560834 DNAAF4Q8WXU2 420 aa8.95□□□□□ -0.98
CTDSPL2-210ENST00000560834 ARHGAP45Q92619 1136 aa8.95□□□□□ -0.98
CTDSPL2-210ENST00000560834 FRAT1Q92837 279 aaPredicted RBP8.95□□□□□ -0.98
CTDSPL2-210ENST00000560834 COLQQ9Y215 455 aaPredicted RBP8.95□□□□□ -0.98
CTDSPL2-210ENST00000560834 MYH3P11055 1940 aa8.95□□□□□ -0.98
CTDSPL2-210ENST00000560834 PLIN1O60240 522 aa8.94□□□□□ -0.98
CTDSPL2-210ENST00000560834 ZPR1O75312 459 aa8.94□□□□□ -0.98
CTDSPL2-210ENST00000560834 IGKV5-2P06315 115 aa8.94□□□□□ -0.98
CTDSPL2-210ENST00000560834 RLBP1P12271 317 aa8.94□□□□□ -0.98
CTDSPL2-210ENST00000560834 TBC1D9BQ66K14 1250 aa8.94□□□□□ -0.98
CTDSPL2-210ENST00000560834 CLEC4GQ6UXB4 293 aa8.94□□□□□ -0.98
CTDSPL2-210ENST00000560834 RIC3Q7Z5B4 369 aa8.94□□□□□ -0.98
CTDSPL2-210ENST00000560834 ZNF467Q7Z7K2 595 aaPredicted RBP8.94□□□□□ -0.98
CTDSPL2-210ENST00000560834 NPM2Q86SE8 214 aaKnown RBP8.94□□□□□ -0.98
CTDSPL2-210ENST00000560834 MARVELD3Q96A59 401 aa8.94□□□□□ -0.98
CTDSPL2-210ENST00000560834 MYD88Q99836 296 aa8.94□□□□□ -0.98
CTDSPL2-210ENST00000560834 ISCA1Q9BUE6 129 aa8.94□□□□□ -0.98
CTDSPL2-210ENST00000560834 METTL22Q9BUU2 404 aaPredicted RBP8.94□□□□□ -0.98
CTDSPL2-210ENST00000560834 API5Q9BZZ5 524 aaKnown RBP8.94□□□□□ -0.98
CTDSPL2-210ENST00000560834 ZNF652Q9Y2D9 606 aa8.94□□□□□ -0.98
CTDSPL2-210ENST00000560834 CARMIL3Q8ND23 1372 aa8.94□□□□□ -0.98
CTDSPL2-210ENST00000560834 SNPHO15079 494 aa8.93□□□□□ -0.98
CTDSPL2-210ENST00000560834 CENPBP07199 599 aaPredicted RBP8.93□□□□□ -0.98
CTDSPL2-210ENST00000560834 DDR1Q08345 913 aa8.93□□□□□ -0.98
CTDSPL2-210ENST00000560834 TCIRG1Q13488 830 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms