RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 TREHO43280 583 aa8.25□□□□□ -1.09
TSPAN3-209ENST00000560715 CTSHP09668 335 aa8.25□□□□□ -1.09
TSPAN3-209ENST00000560715 TSPY4P0CV99 314 aa8.25□□□□□ -1.09
TSPAN3-209ENST00000560715 TSPY10P0CW01 314 aa8.25□□□□□ -1.09
TSPAN3-209ENST00000560715 DHX8Q14562 1220 aaKnown RBP8.25□□□□□ -1.09
TSPAN3-209ENST00000560715 MAST1Q9Y2H9 1570 aa8.25□□□□□ -1.09
TSPAN3-209ENST00000560715 CCDC141Q6ZP82 1450 aa8.25□□□□□ -1.09
TSPAN3-209ENST00000560715 GPR182O15218 404 aa8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 XRCC5P13010 732 aaKnown RBP8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 CDKN1CP49918 316 aaPredicted RBP8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 EHHADHQ08426 723 aa8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 TAS1R3Q7RTX0 852 aa8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 ZNF408Q9H9D4 720 aa8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 CYLDQ9NQC7 956 aa8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 KDM5DQ9BY66 1539 aa8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 SMAPO00193 183 aa8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 MCM4P33991 863 aa8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 C21orf62-AS1Q17RA5 79 aa8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 PRPF38BQ5VTL8 546 aaKnown RBP8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 CCDC94Q9BW85 323 aaPredicted RBP8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 INTUQ9ULD6 942 aa8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 ZNF500O60304 480 aaPredicted RBP8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 LETM1O95202 739 aaPredicted RBP8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 CHMP4BP1P59074 171 aa8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 TAF3Q5VWG9 929 aa8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 CENPQQ7L2Z9 268 aaPredicted RBP8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 TMC4Q7Z404 712 aa8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 ZSCAN30Q86W11 494 aa8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 SLKQ9H2G2 1235 aaPredicted RBP8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 DDX41Q9UJV9 622 aaKnown RBP8.24□□□□□ -1.09
TSPAN3-209ENST00000560715 PLEKHH2Q8IVE3 1493 aa8.23□□□□□ -1.09
TSPAN3-209ENST00000560715 ARHGAP5Q13017 1502 aa8.23□□□□□ -1.09
TSPAN3-209ENST00000560715 DYNC1I1O14576 645 aa8.23□□□□□ -1.09
TSPAN3-209ENST00000560715 MZF1P28698 734 aaPredicted RBP8.23□□□□□ -1.09
TSPAN3-209ENST00000560715 TKFCQ3LXA3 575 aa8.23□□□□□ -1.09
TSPAN3-209ENST00000560715 SLF2Q8IX21 1173 aa8.23□□□□□ -1.09
TSPAN3-209ENST00000560715 PLPP7Q8NBV4 271 aa8.23□□□□□ -1.09
TSPAN3-209ENST00000560715 FBXO9Q9UK97 447 aaPredicted RBP8.23□□□□□ -1.09
TSPAN3-209ENST00000560715 GNALP38405 381 aa8.23□□□□□ -1.09
TSPAN3-209ENST00000560715 TTC39BQ5VTQ0 682 aaPredicted RBP8.23□□□□□ -1.09
TSPAN3-209ENST00000560715 PNISRQ8TF01 805 aaKnown RBP8.23□□□□□ -1.09
TSPAN3-209ENST00000560715 ZNF512BQ96KM6 892 aaPredicted RBP8.23□□□□□ -1.09
TSPAN3-209ENST00000560715 EGFL7Q9UHF1 273 aa8.23□□□□□ -1.09
TSPAN3-209ENST00000560715 KIAA1107Q9UPP5 1409 aa8.23□□□□□ -1.09
TSPAN3-209ENST00000560715 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.22□□□□□ -1.09
TSPAN3-209ENST00000560715 VGLL3A8MV65 326 aa8.22□□□□□ -1.09
TSPAN3-209ENST00000560715 TSEN2Q8NCE0 465 aaKnown RBP8.22□□□□□ -1.09
TSPAN3-209ENST00000560715 SH3TC2Q8TF17 1288 aa8.22□□□□□ -1.09
TSPAN3-209ENST00000560715 USP19O94966 1318 aa8.22□□□□□ -1.09
TSPAN3-209ENST00000560715 ESYT3A0FGR9 886 aa8.22□□□□□ -1.09
TSPAN3-209ENST00000560715 ATP5J2-PTCD1G3V325 749 aa8.22□□□□□ -1.09
TSPAN3-209ENST00000560715 HNRNPMP52272 730 aaKnown RBP eCLIP8.22□□□□□ -1.09
TSPAN3-209ENST00000560715 FMR1Q06787 632 aaKnown RBP eCLIP8.22□□□□□ -1.09
TSPAN3-209ENST00000560715 AXDND1Q5T1B0 1012 aaPredicted RBP8.22□□□□□ -1.09
TSPAN3-209ENST00000560715 RNF135Q8IUD6 432 aa8.22□□□□□ -1.09
TSPAN3-209ENST00000560715 TEX14Q8IWB6 1497 aa8.22□□□□□ -1.09
TSPAN3-209ENST00000560715 UQCRHLA0A096LP55 91 aa8.21□□□□□ -1.09
TSPAN3-209ENST00000560715 ZBBXA8MT70 800 aa8.21□□□□□ -1.09
TSPAN3-209ENST00000560715 UQCRHP07919 91 aa8.21□□□□□ -1.09
TSPAN3-209ENST00000560715 ATF4P18848 351 aaPredicted RBP8.21□□□□□ -1.09
TSPAN3-209ENST00000560715 DAB2P98082 770 aa8.21□□□□□ -1.09
TSPAN3-209ENST00000560715 SAFB2Q14151 953 aaKnown RBP eCLIP8.21□□□□□ -1.09
TSPAN3-209ENST00000560715 GRIPAP1Q4V328 841 aa8.21□□□□□ -1.09
TSPAN3-209ENST00000560715 DALRD3Q5D0E6 543 aaKnown RBP8.21□□□□□ -1.09
TSPAN3-209ENST00000560715 CRBNQ96SW2 442 aa8.21□□□□□ -1.09
TSPAN3-209ENST00000560715 PPCSQ9HAB8 311 aa8.21□□□□□ -1.09
TSPAN3-209ENST00000560715 SYCP2Q9BX26 1530 aa8.21□□□□□ -1.09
TSPAN3-209ENST00000560715 UBE4AQ14139 1066 aa8.21□□□□□ -1.1
TSPAN3-209ENST00000560715 PPP4R4Q6NUP7 873 aa8.21□□□□□ -1.1
TSPAN3-209ENST00000560715 PLEKHM2Q8IWE5 1019 aa8.21□□□□□ -1.1
TSPAN3-209ENST00000560715 L3MBTL2Q969R5 705 aa8.21□□□□□ -1.1
TSPAN3-209ENST00000560715 R3HCC1Q9Y3T6 440 aaKnown RBP8.21□□□□□ -1.1
TSPAN3-209ENST00000560715 KIF15Q9NS87 1388 aa8.21□□□□□ -1.1
TSPAN3-209ENST00000560715 PLXNC1O60486 1568 aa8.21□□□□□ -1.1
TSPAN3-209ENST00000560715 PRPF40AO75400 957 aaKnown RBP8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 ANKRD13DQ6ZTN6 518 aa8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 ARMC5Q96C12 935 aa8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 SNTG2Q9NY99 539 aa8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 NRBP1Q9UHY1 535 aa8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 PCDHB9Q9Y5E1 797 aa8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 PLCH2O75038 1416 aa8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 CDC45O75419 566 aa8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 CCDC173Q0VFZ6 552 aa8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 PAK2Q13177 524 aa8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 MEI1Q5TIA1 1274 aa8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 CDCA7LQ96GN5 454 aa8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 PPP1R9BQ96SB3 815 aa8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 DNAAF2Q9NVR5 837 aaKnown RBP8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 GGT7Q9UJ14 662 aa8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 COMMD10Q9Y6G5 202 aa8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 ARAP3Q8WWN8 1544 aa8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 LRPPRCP42704 1394 aaKnown RBP8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 DHX29Q7Z478 1369 aaKnown RBP8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 MSNP26038 577 aaKnown RBP8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 ETFBP38117 255 aa8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 PODNQ7Z5L7 613 aa8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 C12orf49Q9H741 205 aa8.2□□□□□ -1.1
TSPAN3-209ENST00000560715 PHF14O94880 888 aa8.19□□□□□ -1.1
TSPAN3-209ENST00000560715 DKK1O94907 266 aa8.19□□□□□ -1.1
TSPAN3-209ENST00000560715 NFE2L2Q16236 605 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms