RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 NTSR2O95665 410 aa16.69■□□□□ 0.26
CTDSPL2-209ENST00000560620 MYH16Q9H6N6 1097 aa16.69■□□□□ 0.26
CTDSPL2-209ENST00000560620 GPBP1L1Q9HC44 474 aaPredicted RBP16.69■□□□□ 0.26
CTDSPL2-209ENST00000560620 TRMT112Q9UI30 125 aaKnown RBP16.69■□□□□ 0.26
CTDSPL2-209ENST00000560620 ANKRD36CQ5JPF3 1778 aa16.69■□□□□ 0.26
CTDSPL2-209ENST00000560620 ATP5J2-PTCD1G3V325 749 aa16.68■□□□□ 0.26
CTDSPL2-209ENST00000560620 DDX58O95786 925 aaKnown RBP16.68■□□□□ 0.26
CTDSPL2-209ENST00000560620 ALDH1B1P30837 517 aa16.68■□□□□ 0.26
CTDSPL2-209ENST00000560620 DIEXFQ68CQ4 756 aaKnown RBP16.68■□□□□ 0.26
CTDSPL2-209ENST00000560620 NLRP10Q86W26 655 aa16.68■□□□□ 0.26
CTDSPL2-209ENST00000560620 CCER2I3L3R5 266 aa16.67■□□□□ 0.26
CTDSPL2-209ENST00000560620 NLRP3Q96P20 1036 aa16.67■□□□□ 0.26
CTDSPL2-209ENST00000560620 ADCY9O60503 1353 aa16.66■□□□□ 0.26
CTDSPL2-209ENST00000560620 TNRC6CQ9HCJ0 1690 aaKnown RBP16.66■□□□□ 0.26
CTDSPL2-209ENST00000560620 SLX4Q8IY92 1834 aa16.66■□□□□ 0.26
CTDSPL2-209ENST00000560620 KLRG2A4D1S0 409 aaPredicted RBP16.66■□□□□ 0.26
CTDSPL2-209ENST00000560620 EXOSC9Q06265 439 aaKnown RBP16.66■□□□□ 0.26
CTDSPL2-209ENST00000560620 RTL5Q5HYW3 569 aaPredicted RBP16.66■□□□□ 0.26
CTDSPL2-209ENST00000560620 SOGA3Q5TF21 947 aa16.66■□□□□ 0.26
CTDSPL2-209ENST00000560620 SH3TC1Q8TE82 1336 aa16.66■□□□□ 0.26
CTDSPL2-209ENST00000560620 ARFGEF2Q9Y6D5 1785 aa16.65■□□□□ 0.26
CTDSPL2-209ENST00000560620 SLC4A2P04920 1241 aa16.65■□□□□ 0.26
CTDSPL2-209ENST00000560620 HCLS1P14317 486 aaPredicted RBP16.65■□□□□ 0.26
CTDSPL2-209ENST00000560620 LMNB1P20700 586 aa16.65■□□□□ 0.26
CTDSPL2-209ENST00000560620 RBM17Q96I25 401 aaKnown RBP16.65■□□□□ 0.26
CTDSPL2-209ENST00000560620 MYD88Q99836 296 aa16.65■□□□□ 0.26
CTDSPL2-209ENST00000560620 RNF123Q5XPI4 1314 aa16.65■□□□□ 0.26
CTDSPL2-209ENST00000560620 CRY2Q49AN0 593 aa16.64■□□□□ 0.25
CTDSPL2-209ENST00000560620 TAOK3Q9H2K8 898 aa16.64■□□□□ 0.25
CTDSPL2-209ENST00000560620 SPINK5Q9NQ38 1064 aaPredicted RBP16.64■□□□□ 0.25
CTDSPL2-209ENST00000560620 RIC1Q4ADV7 1423 aa16.63■□□□□ 0.25
CTDSPL2-209ENST00000560620 NFKBIEO00221 500 aa16.63■□□□□ 0.25
CTDSPL2-209ENST00000560620 CCDC93Q567U6 631 aa16.63■□□□□ 0.25
CTDSPL2-209ENST00000560620 SYNE4Q8N205 404 aa16.63■□□□□ 0.25
CTDSPL2-209ENST00000560620 FAM89AQ96GI7 184 aa16.63■□□□□ 0.25
CTDSPL2-209ENST00000560620 SBF1O95248 1867 aa16.63■□□□□ 0.25
CTDSPL2-209ENST00000560620 PI4KAP2A4QPH2 592 aa16.62■□□□□ 0.25
CTDSPL2-209ENST00000560620 C3orf67Q6ZVT6 689 aa16.62■□□□□ 0.25
CTDSPL2-209ENST00000560620 PI4KAP1Q8N8J0 262 aa16.62■□□□□ 0.25
CTDSPL2-209ENST00000560620 ISCA1Q9BUE6 129 aa16.62■□□□□ 0.25
CTDSPL2-209ENST00000560620 TMX4Q9H1E5 349 aaPredicted RBP16.62■□□□□ 0.25
CTDSPL2-209ENST00000560620 MAP3K2Q9Y2U5 619 aa16.62■□□□□ 0.25
CTDSPL2-209ENST00000560620 CCDC88AQ3V6T2 1871 aa16.61■□□□□ 0.25
CTDSPL2-209ENST00000560620 VAMP4O75379 141 aa16.61■□□□□ 0.25
CTDSPL2-209ENST00000560620 NEXNQ0ZGT2 675 aa16.61■□□□□ 0.25
CTDSPL2-209ENST00000560620 SLC10A5Q5PT55 438 aa16.61■□□□□ 0.25
CTDSPL2-209ENST00000560620 OLFM4Q6UX06 510 aa16.61■□□□□ 0.25
CTDSPL2-209ENST00000560620 KSR2Q6VAB6 950 aa16.61■□□□□ 0.25
CTDSPL2-209ENST00000560620 PPEF1O14829 653 aaPredicted RBP16.6■□□□□ 0.25
CTDSPL2-209ENST00000560620 HOXA10P31260 410 aaPredicted RBP16.6■□□□□ 0.25
CTDSPL2-209ENST00000560620 FKBP5Q13451 457 aaPredicted RBP16.6■□□□□ 0.25
CTDSPL2-209ENST00000560620 G2E3Q7L622 706 aa16.6■□□□□ 0.25
CTDSPL2-209ENST00000560620 RTKN2Q8IZC4 609 aa16.6■□□□□ 0.25
CTDSPL2-209ENST00000560620 MIER1Q8N108 512 aa16.6■□□□□ 0.25
CTDSPL2-209ENST00000560620 METTL22Q9BUU2 404 aaPredicted RBP16.6■□□□□ 0.25
CTDSPL2-209ENST00000560620 FER1L6Q2WGJ9 1857 aa16.59■□□□□ 0.25
CTDSPL2-209ENST00000560620 FLIIQ13045 1269 aa16.59■□□□□ 0.25
CTDSPL2-209ENST00000560620 TRIM28Q13263 835 aaKnown RBP16.59■□□□□ 0.25
CTDSPL2-209ENST00000560620 DDX46Q7L014 1031 aaKnown RBP16.59■□□□□ 0.25
CTDSPL2-209ENST00000560620 C7orf43Q8WVR3 580 aa16.59■□□□□ 0.25
CTDSPL2-209ENST00000560620 CRAMP1Q96RY5 1269 aa16.59■□□□□ 0.25
CTDSPL2-209ENST00000560620 CWC25Q9NXE8 425 aaPredicted RBP16.59■□□□□ 0.25
CTDSPL2-209ENST00000560620 KDM2BQ8NHM5 1336 aa16.59■□□□□ 0.25
CTDSPL2-209ENST00000560620 E9PSI1 815 aa16.58■□□□□ 0.24
CTDSPL2-209ENST00000560620 IRS4O14654 1257 aaPredicted RBP16.58■□□□□ 0.24
CTDSPL2-209ENST00000560620 HSP90B1P14625 803 aaKnown RBP16.58■□□□□ 0.24
CTDSPL2-209ENST00000560620 PRELPP51888 382 aa16.58■□□□□ 0.24
CTDSPL2-209ENST00000560620 FKBP4Q02790 459 aaKnown RBP eCLIP16.58■□□□□ 0.24
CTDSPL2-209ENST00000560620 ZBTB38Q8NAP3 1195 aaPredicted RBP16.58■□□□□ 0.24
CTDSPL2-209ENST00000560620 CCDC191Q8NCU4 936 aa16.58■□□□□ 0.24
CTDSPL2-209ENST00000560620 ZNF521Q96K83 1311 aa16.58■□□□□ 0.24
CTDSPL2-209ENST00000560620 ABCC4O15439 1325 aa16.57■□□□□ 0.24
CTDSPL2-209ENST00000560620 LTBP3Q9NS15 1303 aa16.57■□□□□ 0.24
CTDSPL2-209ENST00000560620 ZNF277Q9NRM2 450 aaPredicted RBP16.57■□□□□ 0.24
CTDSPL2-209ENST00000560620 LAMB2P55268 1798 aa16.56■□□□□ 0.24
CTDSPL2-209ENST00000560620 TIAM2Q8IVF5 1701 aa16.56■□□□□ 0.24
CTDSPL2-209ENST00000560620 ZC3H4Q9UPT8 1303 aaKnown RBP16.56■□□□□ 0.24
CTDSPL2-209ENST00000560620 C1QTNF8P60827 252 aa16.56■□□□□ 0.24
CTDSPL2-209ENST00000560620 CC2D2BQ6DHV5 1058 aa16.56■□□□□ 0.24
CTDSPL2-209ENST00000560620 DPY19L2Q6NUT2 758 aa16.56■□□□□ 0.24
CTDSPL2-209ENST00000560620 C16orf71Q8IYS4 520 aaPredicted RBP16.56■□□□□ 0.24
CTDSPL2-209ENST00000560620 JARID2Q92833 1246 aaPredicted RBP16.56■□□□□ 0.24
CTDSPL2-209ENST00000560620 NMRK2Q9NPI5 230 aa16.56■□□□□ 0.24
CTDSPL2-209ENST00000560620 PCCAP05165 728 aaPredicted RBP16.55■□□□□ 0.24
CTDSPL2-209ENST00000560620 CWF19L2Q2TBE0 894 aaKnown RBP16.55■□□□□ 0.24
CTDSPL2-209ENST00000560620 DDX60Q8IY21 1712 aaKnown RBP16.55■□□□□ 0.24
CTDSPL2-209ENST00000560620 CACNA1FO60840 1977 aa16.55■□□□□ 0.24
CTDSPL2-209ENST00000560620 BBOX1O75936 387 aa16.54■□□□□ 0.24
CTDSPL2-209ENST00000560620 GRAPQ13588 217 aa16.54■□□□□ 0.24
CTDSPL2-209ENST00000560620 GRIPAP1Q4V328 841 aa16.54■□□□□ 0.24
CTDSPL2-209ENST00000560620 GRAPLQ8TC17 118 aaPredicted RBP16.54■□□□□ 0.24
CTDSPL2-209ENST00000560620 DNAAF4Q8WXU2 420 aa16.54■□□□□ 0.24
CTDSPL2-209ENST00000560620 RRAGCQ9HB90 399 aa16.54■□□□□ 0.24
CTDSPL2-209ENST00000560620 GLTPD2A6NH11 291 aa16.53■□□□□ 0.24
CTDSPL2-209ENST00000560620 IGKV5-2P06315 115 aa16.53■□□□□ 0.24
CTDSPL2-209ENST00000560620 SLFN5Q08AF3 891 aa16.53■□□□□ 0.24
CTDSPL2-209ENST00000560620 CDCA7LQ96GN5 454 aa16.53■□□□□ 0.24
CTDSPL2-209ENST00000560620 ATP6V0A2Q9Y487 856 aa16.53■□□□□ 0.24
CTDSPL2-209ENST00000560620 DICER1Q9UPY3 1922 aaKnown RBP16.53■□□□□ 0.24
CTDSPL2-209ENST00000560620 NEURL1BA8MQ27 555 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms