RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 RPGRQ92834 1020 aaKnown RBP12.76□□□□□ -0.37
HERC1-209ENST00000560519 MAP3K15Q6ZN16 1313 aa12.76□□□□□ -0.37
HERC1-209ENST00000560519 RASSF10A6NK89 507 aa12.75□□□□□ -0.37
HERC1-209ENST00000560519 FOXN1O15353 648 aa12.75□□□□□ -0.37
HERC1-209ENST00000560519 ITGBL1O95965 494 aaPredicted RBP12.75□□□□□ -0.37
HERC1-209ENST00000560519 ERBB4Q15303 1308 aa12.75□□□□□ -0.37
HERC1-209ENST00000560519 TMX4Q9H1E5 349 aaPredicted RBP12.75□□□□□ -0.37
HERC1-209ENST00000560519 LRRC37AA6NMS7 1700 aa12.74□□□□□ -0.37
HERC1-209ENST00000560519 DCTN1Q14203 1278 aa12.74□□□□□ -0.37
HERC1-209ENST00000560519 SYNE4Q8N205 404 aa12.74□□□□□ -0.37
HERC1-209ENST00000560519 COL4A5P29400 1685 aa12.73□□□□□ -0.37
HERC1-209ENST00000560519 MAPK8IP3Q9UPT6 1336 aa12.73□□□□□ -0.37
HERC1-209ENST00000560519 VEGFBP49765 207 aa12.73□□□□□ -0.37
HERC1-209ENST00000560519 MAP2K1Q02750 393 aaPredicted RBP12.73□□□□□ -0.37
HERC1-209ENST00000560519 HLFQ16534 295 aa12.73□□□□□ -0.37
HERC1-209ENST00000560519 CNTROBQ8N137 903 aa12.73□□□□□ -0.37
HERC1-209ENST00000560519 PNNQ9H307 717 aaKnown RBP12.73□□□□□ -0.37
HERC1-209ENST00000560519 ABT1Q9ULW3 272 aaKnown RBP12.73□□□□□ -0.37
HERC1-209ENST00000560519 PPEF1O14829 653 aaPredicted RBP12.72□□□□□ -0.37
HERC1-209ENST00000560519 DEFB115Q30KQ5 88 aa12.72□□□□□ -0.37
HERC1-209ENST00000560519 OLFM4Q6UX06 510 aa12.72□□□□□ -0.37
HERC1-209ENST00000560519 PPP1R42Q7Z4L9 355 aa12.72□□□□□ -0.37
HERC1-209ENST00000560519 RBM17Q96I25 401 aaKnown RBP12.72□□□□□ -0.37
HERC1-209ENST00000560519 CDHR2Q9BYE9 1310 aa12.71□□□□□ -0.37
HERC1-209ENST00000560519 HOXA10P31260 410 aaPredicted RBP12.71□□□□□ -0.37
HERC1-209ENST00000560519 ECE1P42892 770 aa12.71□□□□□ -0.37
HERC1-209ENST00000560519 PARP10Q53GL7 1025 aa12.71□□□□□ -0.37
HERC1-209ENST00000560519 MAP1SQ66K74 1059 aaPredicted RBP12.71□□□□□ -0.37
HERC1-209ENST00000560519 USP50Q70EL3 339 aaPredicted RBP12.71□□□□□ -0.37
HERC1-209ENST00000560519 NUTM1Q86Y26 1132 aa12.71□□□□□ -0.37
HERC1-209ENST00000560519 NIM1KQ8IY84 436 aa12.71□□□□□ -0.37
HERC1-209ENST00000560519 LARGE2Q8N3Y3 721 aa12.71□□□□□ -0.37
HERC1-209ENST00000560519 CRAMP1Q96RY5 1269 aa12.71□□□□□ -0.37
HERC1-209ENST00000560519 VPS33BQ9H267 617 aa12.71□□□□□ -0.37
HERC1-209ENST00000560519 WBP1LQ9NX94 342 aa12.71□□□□□ -0.37
HERC1-209ENST00000560519 GJA3Q9Y6H8 435 aa12.71□□□□□ -0.37
HERC1-209ENST00000560519 UBN2Q6ZU65 1347 aa12.7□□□□□ -0.38
HERC1-209ENST00000560519 WDR33Q9C0J8 1336 aaKnown RBP12.7□□□□□ -0.38
HERC1-209ENST00000560519 NGEFQ8N5V2 710 aa12.7□□□□□ -0.38
HERC1-209ENST00000560519 SUPT20HQ8NEM7 779 aa12.7□□□□□ -0.38
HERC1-209ENST00000560519 BEGAINQ9BUH8 593 aa12.7□□□□□ -0.38
HERC1-209ENST00000560519 ZBTB3Q9H5J0 574 aa12.7□□□□□ -0.38
HERC1-209ENST00000560519 DDX21Q9NR30 783 aaKnown RBP eCLIP12.7□□□□□ -0.38
HERC1-209ENST00000560519 NTSR2O95665 410 aa12.69□□□□□ -0.38
HERC1-209ENST00000560519 MYL6BP14649 208 aa12.69□□□□□ -0.38
HERC1-209ENST00000560519 SCNN1DP51172 638 aa12.69□□□□□ -0.38
HERC1-209ENST00000560519 EIF4A1P60842 406 aaKnown RBP12.69□□□□□ -0.38
HERC1-209ENST00000560519 GIGYF2Q6Y7W6 1299 aaKnown RBP12.69□□□□□ -0.38
HERC1-209ENST00000560519 RRP7AQ9Y3A4 280 aaKnown RBP12.69□□□□□ -0.38
HERC1-209ENST00000560519 PPIP5K2O43314 1243 aa12.68□□□□□ -0.38
HERC1-209ENST00000560519 GPTP24298 496 aa12.68□□□□□ -0.38
HERC1-209ENST00000560519 LBX1P52954 281 aa12.68□□□□□ -0.38
HERC1-209ENST00000560519 NFE2L2Q16236 605 aa12.68□□□□□ -0.38
HERC1-209ENST00000560519 NLRP3Q96P20 1036 aa12.68□□□□□ -0.38
HERC1-209ENST00000560519 HSPA8P11142 646 aaKnown RBP12.67□□□□□ -0.38
HERC1-209ENST00000560519 HSP90AB3PQ58FF7 597 aa12.67□□□□□ -0.38
HERC1-209ENST00000560519 SUSD4Q5VX71 490 aa12.67□□□□□ -0.38
HERC1-209ENST00000560519 TTLL7Q6ZT98 887 aa12.67□□□□□ -0.38
HERC1-209ENST00000560519 PAXIP1Q6ZW49 1069 aaPredicted RBP12.67□□□□□ -0.38
HERC1-209ENST00000560519 ZNF34Q8IZ26 560 aa12.67□□□□□ -0.38
HERC1-209ENST00000560519 ADARB2Q9NS39 739 aaKnown RBP12.67□□□□□ -0.38
HERC1-209ENST00000560519 MIS18AQ9NYP9 233 aa12.67□□□□□ -0.38
HERC1-209ENST00000560519 LMOD3Q0VAK6 560 aa12.66□□□□□ -0.38
HERC1-209ENST00000560519 CAPNS2Q96L46 248 aa12.66□□□□□ -0.38
HERC1-209ENST00000560519 PLEKHF1Q96S99 279 aa12.66□□□□□ -0.38
HERC1-209ENST00000560519 TSPYL4Q9UJ04 414 aa12.66□□□□□ -0.38
HERC1-209ENST00000560519 ATP6V0A2Q9Y487 856 aa12.66□□□□□ -0.38
HERC1-209ENST00000560519 ABCC4O15439 1325 aa12.65□□□□□ -0.38
HERC1-209ENST00000560519 DUOX1Q9NRD9 1551 aa12.65□□□□□ -0.38
HERC1-209ENST00000560519 AOC3Q16853 763 aa12.65□□□□□ -0.38
HERC1-209ENST00000560519 UTP14AQ9BVJ6 771 aaKnown RBP12.65□□□□□ -0.38
HERC1-209ENST00000560519 BABAM1Q9NWV8 329 aa12.65□□□□□ -0.38
HERC1-209ENST00000560519 GPRC5DQ9NZD1 345 aa12.65□□□□□ -0.38
HERC1-209ENST00000560519 TLL2Q9Y6L7 1015 aa12.65□□□□□ -0.38
HERC1-209ENST00000560519 CA12O43570 354 aa12.64□□□□□ -0.39
HERC1-209ENST00000560519 EPS15P42566 896 aa12.64□□□□□ -0.39
HERC1-209ENST00000560519 DPP8Q6V1X1 898 aaPredicted RBP12.64□□□□□ -0.39
HERC1-209ENST00000560519 TMC4Q7Z404 712 aa12.64□□□□□ -0.39
HERC1-209ENST00000560519 HHIPL1Q96JK4 782 aa12.64□□□□□ -0.39
HERC1-209ENST00000560519 RTFDC1Q9BY42 306 aaPredicted RBP12.64□□□□□ -0.39
HERC1-209ENST00000560519 ZNRF3Q9ULT6 936 aa12.64□□□□□ -0.39
HERC1-209ENST00000560519 MAP2K2P36507 400 aa12.63□□□□□ -0.39
HERC1-209ENST00000560519 ABHD8Q96I13 439 aa12.63□□□□□ -0.39
HERC1-209ENST00000560519 GPR101Q96P66 508 aaPredicted RBP12.63□□□□□ -0.39
HERC1-209ENST00000560519 TAF1P21675 1872 aa12.63□□□□□ -0.39
HERC1-209ENST00000560519 PSME4Q14997 1843 aa12.62□□□□□ -0.39
HERC1-209ENST00000560519 TCERG1O14776 1098 aaKnown RBP12.62□□□□□ -0.39
HERC1-209ENST00000560519 BBOX1O75936 387 aa12.62□□□□□ -0.39
HERC1-209ENST00000560519 KIAA2012Q0VF49 1180 aa12.62□□□□□ -0.39
HERC1-209ENST00000560519 GRM1Q13255 1194 aa12.62□□□□□ -0.39
HERC1-209ENST00000560519 TNIP1Q15025 636 aa12.62□□□□□ -0.39
HERC1-209ENST00000560519 SLC10A5Q5PT55 438 aa12.62□□□□□ -0.39
HERC1-209ENST00000560519 CIAPIN1Q6FI81 312 aa12.62□□□□□ -0.39
HERC1-209ENST00000560519 CYP4F22Q6NT55 531 aa12.62□□□□□ -0.39
HERC1-209ENST00000560519 DDX46Q7L014 1031 aaKnown RBP12.62□□□□□ -0.39
HERC1-209ENST00000560519 ZC3H15Q8WU90 426 aaKnown RBP12.62□□□□□ -0.39
HERC1-209ENST00000560519 THUMPD2Q9BTF0 503 aaKnown RBP12.62□□□□□ -0.39
HERC1-209ENST00000560519 SH3TC1Q8TE82 1336 aa12.62□□□□□ -0.39
HERC1-209ENST00000560519 SP8Q8IXZ3 490 aa12.61□□□□□ -0.39
HERC1-209ENST00000560519 MPNDQ8N594 471 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms