RNA–Protein interactions for RNA: ENST00000560253.1

MEIS3-208, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,060 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-208ENST00000560253 RPGRQ92834 1020 aaKnown RBP19.25■□□□□ 0.67
MEIS3-208ENST00000560253 KLRG1Q96E93 195 aa19.25■□□□□ 0.67
MEIS3-208ENST00000560253 NUP98P52948 1817 aa19.25■□□□□ 0.67
MEIS3-208ENST00000560253 DDX58O95786 925 aaKnown RBP19.24■□□□□ 0.67
MEIS3-208ENST00000560253 ERFEQ4G0M1 354 aa19.24■□□□□ 0.67
MEIS3-208ENST00000560253 NUTM1Q86Y26 1132 aa19.24■□□□□ 0.67
MEIS3-208ENST00000560253 NLRP3Q96P20 1036 aa19.24■□□□□ 0.67
MEIS3-208ENST00000560253 STK31Q9BXU1 1019 aa19.24■□□□□ 0.67
MEIS3-208ENST00000560253 TMX4Q9H1E5 349 aaPredicted RBP19.24■□□□□ 0.67
MEIS3-208ENST00000560253 PRPF40BQ6NWY9 871 aaKnown RBP19.23■□□□□ 0.67
MEIS3-208ENST00000560253 RIC3Q7Z5B4 369 aa19.23■□□□□ 0.67
MEIS3-208ENST00000560253 UBN2Q6ZU65 1347 aa19.23■□□□□ 0.67
MEIS3-208ENST00000560253 DLEC1Q9Y238 1755 aa19.22■□□□□ 0.67
MEIS3-208ENST00000560253 C8orf58Q8NAV2 365 aa19.22■□□□□ 0.67
MEIS3-208ENST00000560253 RBM17Q96I25 401 aaKnown RBP19.22■□□□□ 0.67
MEIS3-208ENST00000560253 TRMT112Q9UI30 125 aaKnown RBP19.22■□□□□ 0.67
MEIS3-208ENST00000560253 ANKRD31Q8N7Z5 1873 aa19.22■□□□□ 0.67
MEIS3-208ENST00000560253 KDM2BQ8NHM5 1336 aa19.22■□□□□ 0.67
MEIS3-208ENST00000560253 NTSR2O95665 410 aa19.21■□□□□ 0.67
MEIS3-208ENST00000560253 HTRA3P83110 453 aa19.21■□□□□ 0.67
MEIS3-208ENST00000560253 ZC3H4Q9UPT8 1303 aaKnown RBP19.21■□□□□ 0.67
MEIS3-208ENST00000560253 TWISTNBQ3B726 338 aaPredicted RBP19.2■□□□□ 0.66
MEIS3-208ENST00000560253 CCDC93Q567U6 631 aa19.2■□□□□ 0.66
MEIS3-208ENST00000560253 NLRP10Q86W26 655 aa19.2■□□□□ 0.66
MEIS3-208ENST00000560253 TSR2Q969E8 191 aaKnown RBP19.2■□□□□ 0.66
MEIS3-208ENST00000560253 HSP90B1P14625 803 aaKnown RBP19.19■□□□□ 0.66
MEIS3-208ENST00000560253 RASSF7Q02833 373 aa19.19■□□□□ 0.66
MEIS3-208ENST00000560253 CRY2Q49AN0 593 aa19.19■□□□□ 0.66
MEIS3-208ENST00000560253 SLC10A5Q5PT55 438 aa19.19■□□□□ 0.66
MEIS3-208ENST00000560253 CC2D2BQ6DHV5 1058 aa19.19■□□□□ 0.66
MEIS3-208ENST00000560253 DPY19L2Q6NUT2 758 aa19.19■□□□□ 0.66
MEIS3-208ENST00000560253 RTKN2Q8IZC4 609 aa19.19■□□□□ 0.66
MEIS3-208ENST00000560253 TAOK3Q9H2K8 898 aa19.19■□□□□ 0.66
MEIS3-208ENST00000560253 MYH16Q9H6N6 1097 aa19.19■□□□□ 0.66
MEIS3-208ENST00000560253 SH3TC1Q8TE82 1336 aa19.19■□□□□ 0.66
MEIS3-208ENST00000560253 RIC1Q4ADV7 1423 aa19.18■□□□□ 0.66
MEIS3-208ENST00000560253 GRIPAP1Q4V328 841 aa19.18■□□□□ 0.66
MEIS3-208ENST00000560253 NFKBIEO00221 500 aa19.17■□□□□ 0.66
MEIS3-208ENST00000560253 HOXA10P31260 410 aaPredicted RBP19.17■□□□□ 0.66
MEIS3-208ENST00000560253 C16orf71Q8IYS4 520 aaPredicted RBP19.17■□□□□ 0.66
MEIS3-208ENST00000560253 CRAMP1Q96RY5 1269 aa19.17■□□□□ 0.66
MEIS3-208ENST00000560253 PHAXQ9H814 394 aaKnown RBP19.17■□□□□ 0.66
MEIS3-208ENST00000560253 LTBP3Q9NS15 1303 aa19.17■□□□□ 0.66
MEIS3-208ENST00000560253 TRIM28Q13263 835 aaKnown RBP19.16■□□□□ 0.66
MEIS3-208ENST00000560253 TSPYL6Q8N831 410 aa19.16■□□□□ 0.66
MEIS3-208ENST00000560253 ABCC12Q96J65 1359 aa19.16■□□□□ 0.66
MEIS3-208ENST00000560253 ATP5J2-PTCD1G3V325 749 aa19.15■□□□□ 0.66
MEIS3-208ENST00000560253 NEXNQ0ZGT2 675 aa19.15■□□□□ 0.66
MEIS3-208ENST00000560253 ISCA1Q9BUE6 129 aa19.15■□□□□ 0.66
MEIS3-208ENST00000560253 COL11A2P13942 1736 aaPredicted RBP19.14■□□□□ 0.66
MEIS3-208ENST00000560253 PCNTO95613 3336 aa19.14■□□□□ 0.65
MEIS3-208ENST00000560253 CCER2I3L3R5 266 aa19.14■□□□□ 0.65
MEIS3-208ENST00000560253 FKBP4Q02790 459 aaKnown RBP eCLIP19.14■□□□□ 0.65
MEIS3-208ENST00000560253 DDX46Q7L014 1031 aaKnown RBP19.14■□□□□ 0.65
MEIS3-208ENST00000560253 C7orf43Q8WVR3 580 aa19.14■□□□□ 0.65
MEIS3-208ENST00000560253 SLC4A2P04920 1241 aa19.13■□□□□ 0.65
MEIS3-208ENST00000560253 HCLS1P14317 486 aaPredicted RBP19.13■□□□□ 0.65
MEIS3-208ENST00000560253 CCDC191Q8NCU4 936 aa19.13■□□□□ 0.65
MEIS3-208ENST00000560253 NMRK2Q9NPI5 230 aa19.13■□□□□ 0.65
MEIS3-208ENST00000560253 FANCIQ9NVI1 1328 aa19.13■□□□□ 0.65
MEIS3-208ENST00000560253 SLX4Q8IY92 1834 aa19.13■□□□□ 0.65
MEIS3-208ENST00000560253 GLTPD2A6NH11 291 aa19.12■□□□□ 0.65
MEIS3-208ENST00000560253 BBOX1O75936 387 aa19.12■□□□□ 0.65
MEIS3-208ENST00000560253 KSR2Q6VAB6 950 aa19.12■□□□□ 0.65
MEIS3-208ENST00000560253 MYD88Q99836 296 aa19.12■□□□□ 0.65
MEIS3-208ENST00000560253 PPEF1O14829 653 aaPredicted RBP19.11■□□□□ 0.65
MEIS3-208ENST00000560253 EXOSC9Q06265 439 aaKnown RBP19.11■□□□□ 0.65
MEIS3-208ENST00000560253 RBM46Q8TBY0 533 aaKnown RBP19.11■□□□□ 0.65
MEIS3-208ENST00000560253 FAM89AQ96GI7 184 aa19.11■□□□□ 0.65
MEIS3-208ENST00000560253 METTL22Q9BUU2 404 aaPredicted RBP19.11■□□□□ 0.65
MEIS3-208ENST00000560253 SBF1O95248 1867 aa19.11■□□□□ 0.65
MEIS3-208ENST00000560253 ANKRD36CQ5JPF3 1778 aa19.11■□□□□ 0.65
MEIS3-208ENST00000560253 TMC4Q7Z404 712 aa19.1■□□□□ 0.65
MEIS3-208ENST00000560253 SYNE4Q8N205 404 aa19.1■□□□□ 0.65
MEIS3-208ENST00000560253 ZBTB38Q8NAP3 1195 aaPredicted RBP19.1■□□□□ 0.65
MEIS3-208ENST00000560253 CWC25Q9NXE8 425 aaPredicted RBP19.1■□□□□ 0.65
MEIS3-208ENST00000560253 MAP3K2Q9Y2U5 619 aa19.1■□□□□ 0.65
MEIS3-208ENST00000560253 CACNA1SQ13698 1873 aa19.09■□□□□ 0.65
MEIS3-208ENST00000560253 ARFGEF2Q9Y6D5 1785 aa19.09■□□□□ 0.65
MEIS3-208ENST00000560253 PI4KAP2A4QPH2 592 aa19.09■□□□□ 0.65
MEIS3-208ENST00000560253 TCERG1O14776 1098 aaKnown RBP19.09■□□□□ 0.65
MEIS3-208ENST00000560253 PI4KAP1Q8N8J0 262 aa19.09■□□□□ 0.65
MEIS3-208ENST00000560253 JDP2Q8WYK2 163 aa19.09■□□□□ 0.65
MEIS3-208ENST00000560253 PSMD1Q99460 953 aa19.09■□□□□ 0.65
MEIS3-208ENST00000560253 RRAGCQ9HB90 399 aa19.09■□□□□ 0.65
MEIS3-208ENST00000560253 IRS4O14654 1257 aaPredicted RBP19.08■□□□□ 0.64
MEIS3-208ENST00000560253 VAMP4O75379 141 aa19.08■□□□□ 0.64
MEIS3-208ENST00000560253 VEGFAP15692 232 aaPredicted RBP19.08■□□□□ 0.64
MEIS3-208ENST00000560253 PCDH10Q9P2E7 1040 aa19.08■□□□□ 0.64
MEIS3-208ENST00000560253 FER1L6Q2WGJ9 1857 aa19.07■□□□□ 0.64
MEIS3-208ENST00000560253 PCCAP05165 728 aaPredicted RBP19.07■□□□□ 0.64
MEIS3-208ENST00000560253 FKBP5Q13451 457 aaPredicted RBP19.07■□□□□ 0.64
MEIS3-208ENST00000560253 GRAPQ13588 217 aa19.07■□□□□ 0.64
MEIS3-208ENST00000560253 RTL5Q5HYW3 569 aaPredicted RBP19.07■□□□□ 0.64
MEIS3-208ENST00000560253 SUPT20HQ8NEM7 779 aa19.07■□□□□ 0.64
MEIS3-208ENST00000560253 GRAPLQ8TC17 118 aaPredicted RBP19.07■□□□□ 0.64
MEIS3-208ENST00000560253 ZNF277Q9NRM2 450 aaPredicted RBP19.07■□□□□ 0.64
MEIS3-208ENST00000560253 ATP6V0A2Q9Y487 856 aa19.07■□□□□ 0.64
MEIS3-208ENST00000560253 E9PSI1 815 aa19.06■□□□□ 0.64
MEIS3-208ENST00000560253 IARSP41252 1262 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms