RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 HTATSF1O43719 755 aaKnown RBP26.42■■□□□ 1.82
RABGGTA-214ENST00000560163 CST9Q5W186 159 aa26.42■■□□□ 1.82
RABGGTA-214ENST00000560163 NUTM1Q86Y26 1132 aa26.42■■□□□ 1.82
RABGGTA-214ENST00000560163 NYXQ9GZU5 481 aa26.42■■□□□ 1.82
RABGGTA-214ENST00000560163 ERVV-1B6SEH8 477 aa26.41■■□□□ 1.82
RABGGTA-214ENST00000560163 FAM161AQ3B820 660 aa26.41■■□□□ 1.82
RABGGTA-214ENST00000560163 CAPNS2Q96L46 248 aa26.41■■□□□ 1.82
RABGGTA-214ENST00000560163 NUP98P52948 1817 aa26.41■■□□□ 1.82
RABGGTA-214ENST00000560163 TAF7Q15545 349 aaPredicted RBP26.4■■□□□ 1.82
RABGGTA-214ENST00000560163 GRIPAP1Q4V328 841 aa26.4■■□□□ 1.82
RABGGTA-214ENST00000560163 CFAP53Q96M91 514 aa26.4■■□□□ 1.82
RABGGTA-214ENST00000560163 RIC1Q4ADV7 1423 aa26.39■■□□□ 1.82
RABGGTA-214ENST00000560163 LMOD1P29536 600 aaPredicted RBP26.39■■□□□ 1.82
RABGGTA-214ENST00000560163 USP50Q70EL3 339 aaPredicted RBP26.39■■□□□ 1.82
RABGGTA-214ENST00000560163 SLC51AQ86UW1 340 aa26.39■■□□□ 1.82
RABGGTA-214ENST00000560163 GPR101Q96P66 508 aaPredicted RBP26.39■■□□□ 1.82
RABGGTA-214ENST00000560163 NUDCQ9Y266 331 aa26.39■■□□□ 1.82
RABGGTA-214ENST00000560163 LAMB4A4D0S4 1761 aa26.38■■□□□ 1.81
RABGGTA-214ENST00000560163 ECE1P42892 770 aa26.38■■□□□ 1.81
RABGGTA-214ENST00000560163 RGS19P49795 217 aa26.38■■□□□ 1.81
RABGGTA-214ENST00000560163 CYP4F22Q6NT55 531 aa26.38■■□□□ 1.81
RABGGTA-214ENST00000560163 MIS18AQ9NYP9 233 aa26.38■■□□□ 1.81
RABGGTA-214ENST00000560163 TRPM7Q96QT4 1865 aa26.38■■□□□ 1.81
RABGGTA-214ENST00000560163 U2AF1L5P0DN76 240 aaPredicted RBP26.37■■□□□ 1.81
RABGGTA-214ENST00000560163 U2AF1Q01081 240 aaKnown RBP eCLIP26.37■■□□□ 1.81
RABGGTA-214ENST00000560163 LARGE2Q8N3Y3 721 aa26.37■■□□□ 1.81
RABGGTA-214ENST00000560163 CCER1Q8TC90 406 aaPredicted RBP26.37■■□□□ 1.81
RABGGTA-214ENST00000560163 CRAMP1Q96RY5 1269 aa26.37■■□□□ 1.81
RABGGTA-214ENST00000560163 TLL2Q9Y6L7 1015 aa26.37■■□□□ 1.81
RABGGTA-214ENST00000560163 MAP3K15Q6ZN16 1313 aa26.37■■□□□ 1.81
RABGGTA-214ENST00000560163 IBTKQ9P2D0 1353 aaPredicted RBP26.36■■□□□ 1.81
RABGGTA-214ENST00000560163 TRAF5O00463 557 aa26.36■■□□□ 1.81
RABGGTA-214ENST00000560163 UBN2Q6ZU65 1347 aa26.36■■□□□ 1.81
RABGGTA-214ENST00000560163 TTLL7Q6ZT98 887 aa26.35■■□□□ 1.81
RABGGTA-214ENST00000560163 RPGRQ92834 1020 aaKnown RBP26.35■■□□□ 1.81
RABGGTA-214ENST00000560163 SUSD4Q5VX71 490 aa26.34■■□□□ 1.81
RABGGTA-214ENST00000560163 NGEFQ8N5V2 710 aa26.34■■□□□ 1.81
RABGGTA-214ENST00000560163 MAP2K2P36507 400 aa26.33■■□□□ 1.81
RABGGTA-214ENST00000560163 ZNF34Q8IZ26 560 aa26.33■■□□□ 1.81
RABGGTA-214ENST00000560163 BEGAINQ9BUH8 593 aa26.33■■□□□ 1.81
RABGGTA-214ENST00000560163 C3orf67Q6ZVT6 689 aa26.32■■□□□ 1.8
RABGGTA-214ENST00000560163 PAXIP1Q6ZW49 1069 aaPredicted RBP26.32■■□□□ 1.8
RABGGTA-214ENST00000560163 RBM17Q96I25 401 aaKnown RBP26.32■■□□□ 1.8
RABGGTA-214ENST00000560163 GPRC5DQ9NZD1 345 aa26.32■■□□□ 1.8
RABGGTA-214ENST00000560163 KDM3BQ7LBC6 1761 aa26.31■■□□□ 1.8
RABGGTA-214ENST00000560163 CCDC85CA6NKD9 419 aa26.31■■□□□ 1.8
RABGGTA-214ENST00000560163 PPEF1O14829 653 aaPredicted RBP26.31■■□□□ 1.8
RABGGTA-214ENST00000560163 NTSR2O95665 410 aa26.31■■□□□ 1.8
RABGGTA-214ENST00000560163 GPTP24298 496 aa26.31■■□□□ 1.8
RABGGTA-214ENST00000560163 VPS33BQ9H267 617 aa26.31■■□□□ 1.8
RABGGTA-214ENST00000560163 AOC2O75106 756 aa26.3■■□□□ 1.8
RABGGTA-214ENST00000560163 PPP2R1AP30153 589 aa26.3■■□□□ 1.8
RABGGTA-214ENST00000560163 MLLT1Q03111 559 aaPredicted RBP26.3■■□□□ 1.8
RABGGTA-214ENST00000560163 GRM1Q13255 1194 aa26.3■■□□□ 1.8
RABGGTA-214ENST00000560163 SAPCD2Q86UD0 394 aa26.3■■□□□ 1.8
RABGGTA-214ENST00000560163 NIM1KQ8IY84 436 aa26.3■■□□□ 1.8
RABGGTA-214ENST00000560163 ADARB2Q9NS39 739 aaKnown RBP26.3■■□□□ 1.8
RABGGTA-214ENST00000560163 RRP7AQ9Y3A4 280 aaKnown RBP26.3■■□□□ 1.8
RABGGTA-214ENST00000560163 EIF4A1P60842 406 aaKnown RBP26.29■■□□□ 1.8
RABGGTA-214ENST00000560163 KIF6Q6ZMV9 814 aa26.29■■□□□ 1.8
RABGGTA-214ENST00000560163 PGAP2Q9UHJ9 254 aa26.29■■□□□ 1.8
RABGGTA-214ENST00000560163 TCERG1O14776 1098 aaKnown RBP26.28■■□□□ 1.8
RABGGTA-214ENST00000560163 TNRC18O15417 2968 aaPredicted RBP26.28■■□□□ 1.8
RABGGTA-214ENST00000560163 CXCL9Q07325 125 aa26.28■■□□□ 1.8
RABGGTA-214ENST00000560163 AOC3Q16853 763 aa26.28■■□□□ 1.8
RABGGTA-214ENST00000560163 ZBTB3Q9H5J0 574 aa26.28■■□□□ 1.8
RABGGTA-214ENST00000560163 TSKSQ9UJT2 592 aa26.28■■□□□ 1.8
RABGGTA-214ENST00000560163 PPIP5K2O43314 1243 aa26.27■■□□□ 1.8
RABGGTA-214ENST00000560163 GIGYF2Q6Y7W6 1299 aaKnown RBP26.27■■□□□ 1.8
RABGGTA-214ENST00000560163 PNISRQ8TF01 805 aaKnown RBP26.27■■□□□ 1.8
RABGGTA-214ENST00000560163 HHIPL1Q96JK4 782 aa26.27■■□□□ 1.8
RABGGTA-214ENST00000560163 RTFDC1Q9BY42 306 aaPredicted RBP26.27■■□□□ 1.8
RABGGTA-214ENST00000560163 ATP6V0A2Q9Y487 856 aa26.27■■□□□ 1.8
RABGGTA-214ENST00000560163 MYL6BP14649 208 aa26.26■■□□□ 1.79
RABGGTA-214ENST00000560163 ZNRF3Q9ULT6 936 aa26.26■■□□□ 1.79
RABGGTA-214ENST00000560163 DLG5Q8TDM6 1919 aa26.26■■□□□ 1.79
RABGGTA-214ENST00000560163 SLC10A5Q5PT55 438 aa26.25■■□□□ 1.79
RABGGTA-214ENST00000560163 CA12O43570 354 aa26.24■■□□□ 1.79
RABGGTA-214ENST00000560163 CELF2O95319 508 aaKnown RBP26.24■■□□□ 1.79
RABGGTA-214ENST00000560163 LRP10Q7Z4F1 713 aa26.23■■□□□ 1.79
RABGGTA-214ENST00000560163 PPP1R42Q7Z4L9 355 aa26.23■■□□□ 1.79
RABGGTA-214ENST00000560163 NLRP3Q96P20 1036 aa26.23■■□□□ 1.79
RABGGTA-214ENST00000560163 GLIS2Q9BZE0 524 aaPredicted RBP26.23■■□□□ 1.79
RABGGTA-214ENST00000560163 GMPSP49915 693 aaPredicted RBP26.22■■□□□ 1.79
RABGGTA-214ENST00000560163 HIRAP54198 1017 aaPredicted RBP26.22■■□□□ 1.79
RABGGTA-214ENST00000560163 BRPF1P55201 1214 aaPredicted RBP26.22■■□□□ 1.79
RABGGTA-214ENST00000560163 PARP10Q53GL7 1025 aa26.22■■□□□ 1.79
RABGGTA-214ENST00000560163 ZC3H15Q8WU90 426 aaKnown RBP26.21■■□□□ 1.79
RABGGTA-214ENST00000560163 MCOLN1Q9GZU1 580 aa26.21■■□□□ 1.79
RABGGTA-214ENST00000560163 ABCC4O15439 1325 aa26.2■■□□□ 1.79
RABGGTA-214ENST00000560163 ERBB4Q15303 1308 aa26.2■■□□□ 1.79
RABGGTA-214ENST00000560163 CDHR2Q9BYE9 1310 aa26.2■■□□□ 1.79
RABGGTA-214ENST00000560163 SUPT20HQ8NEM7 779 aa26.2■■□□□ 1.78
RABGGTA-214ENST00000560163 CASP8AP2Q9UKL3 1982 aa26.2■■□□□ 1.78
RABGGTA-214ENST00000560163 SP8Q8IXZ3 490 aa26.19■■□□□ 1.78
RABGGTA-214ENST00000560163 PLEKHF1Q96S99 279 aa26.19■■□□□ 1.78
RABGGTA-214ENST00000560163 TMX4Q9H1E5 349 aaPredicted RBP26.19■■□□□ 1.78
RABGGTA-214ENST00000560163 KIAA2012Q0VF49 1180 aa26.18■■□□□ 1.78
RABGGTA-214ENST00000560163 PDIA6Q15084 440 aa26.18■■□□□ 1.78
RABGGTA-214ENST00000560163 CIAPIN1Q6FI81 312 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms