RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 CHPF2Q9P2E5 772 aa26.63■■□□□ 1.85
CHRNA3-207ENST00000559941 CALD1Q05682 793 aaKnown RBP26.62■■□□□ 1.85
CHRNA3-207ENST00000559941 HSP90AB3PQ58FF7 597 aa26.62■■□□□ 1.85
CHRNA3-207ENST00000559941 IFT57Q9NWB7 429 aa26.62■■□□□ 1.85
CHRNA3-207ENST00000559941 HOXA10P31260 410 aaPredicted RBP26.61■■□□□ 1.85
CHRNA3-207ENST00000559941 GNAI1P63096 354 aa26.61■■□□□ 1.85
CHRNA3-207ENST00000559941 FKBP4Q02790 459 aaKnown RBP eCLIP26.6■■□□□ 1.85
CHRNA3-207ENST00000559941 DUSP27Q5VZP5 1158 aa26.6■■□□□ 1.85
CHRNA3-207ENST00000559941 DPY19L2Q6NUT2 758 aa26.6■■□□□ 1.85
CHRNA3-207ENST00000559941 UTP14AQ9BVJ6 771 aaKnown RBP26.6■■□□□ 1.85
CHRNA3-207ENST00000559941 DBF4Q9UBU7 674 aaPredicted RBP26.6■■□□□ 1.85
CHRNA3-207ENST00000559941 WDR90Q96KV7 1748 aa26.59■■□□□ 1.85
CHRNA3-207ENST00000559941 TCIRG1Q13488 830 aa26.59■■□□□ 1.85
CHRNA3-207ENST00000559941 OLFM4Q6UX06 510 aa26.59■■□□□ 1.85
CHRNA3-207ENST00000559941 RTKN2Q8IZC4 609 aa26.59■■□□□ 1.85
CHRNA3-207ENST00000559941 RPGRQ92834 1020 aaKnown RBP26.59■■□□□ 1.85
CHRNA3-207ENST00000559941 VEGFAP15692 232 aaPredicted RBP26.58■■□□□ 1.85
CHRNA3-207ENST00000559941 SLC10A5Q5PT55 438 aa26.58■■□□□ 1.85
CHRNA3-207ENST00000559941 RNF123Q5XPI4 1314 aa26.58■■□□□ 1.85
CHRNA3-207ENST00000559941 FSTL1Q12841 308 aa26.57■■□□□ 1.84
CHRNA3-207ENST00000559941 NLRP10Q86W26 655 aa26.57■■□□□ 1.84
CHRNA3-207ENST00000559941 RBM17Q96I25 401 aaKnown RBP26.56■■□□□ 1.84
CHRNA3-207ENST00000559941 NLRP3Q96P20 1036 aa26.56■■□□□ 1.84
CHRNA3-207ENST00000559941 CRAMP1Q96RY5 1269 aa26.56■■□□□ 1.84
CHRNA3-207ENST00000559941 HYPKQ9NX55 129 aa26.56■■□□□ 1.84
CHRNA3-207ENST00000559941 APLP1P51693 650 aa26.55■■□□□ 1.84
CHRNA3-207ENST00000559941 CC2D2BQ6DHV5 1058 aa26.55■■□□□ 1.84
CHRNA3-207ENST00000559941 C3orf67Q6ZVT6 689 aa26.55■■□□□ 1.84
CHRNA3-207ENST00000559941 PLBD2Q8NHP8 589 aa26.55■■□□□ 1.84
CHRNA3-207ENST00000559941 LAMB2P55268 1798 aa26.55■■□□□ 1.84
CHRNA3-207ENST00000559941 SNED1Q8TER0 1413 aa26.55■■□□□ 1.84
CHRNA3-207ENST00000559941 POTECB2RU33 542 aa26.54■■□□□ 1.84
CHRNA3-207ENST00000559941 ANP32CO43423 234 aa26.54■■□□□ 1.84
CHRNA3-207ENST00000559941 ANKRD13DQ6ZTN6 518 aa26.54■■□□□ 1.84
CHRNA3-207ENST00000559941 ZNF277Q9NRM2 450 aaPredicted RBP26.54■■□□□ 1.84
CHRNA3-207ENST00000559941 SYNE4Q8N205 404 aa26.53■■□□□ 1.84
CHRNA3-207ENST00000559941 PSMD1Q99460 953 aa26.52■■□□□ 1.84
CHRNA3-207ENST00000559941 ELL2O00472 640 aaPredicted RBP26.51■■□□□ 1.83
CHRNA3-207ENST00000559941 CCDC27Q2M243 656 aa26.51■■□□□ 1.83
CHRNA3-207ENST00000559941 SMC1BQ8NDV3 1235 aa26.51■■□□□ 1.83
CHRNA3-207ENST00000559941 MRS2Q9HD23 443 aa26.51■■□□□ 1.83
CHRNA3-207ENST00000559941 TRMT112Q9UI30 125 aaKnown RBP26.51■■□□□ 1.83
CHRNA3-207ENST00000559941 DDNO94850 711 aaPredicted RBP26.5■■□□□ 1.83
CHRNA3-207ENST00000559941 IARSP41252 1262 aaKnown RBP26.5■■□□□ 1.83
CHRNA3-207ENST00000559941 GRIPAP1Q4V328 841 aa26.5■■□□□ 1.83
CHRNA3-207ENST00000559941 ISCA1Q9BUE6 129 aa26.5■■□□□ 1.83
CHRNA3-207ENST00000559941 SH3TC1Q8TE82 1336 aa26.49■■□□□ 1.83
CHRNA3-207ENST00000559941 PPEF1O14829 653 aaPredicted RBP26.49■■□□□ 1.83
CHRNA3-207ENST00000559941 C8orf58Q8NAV2 365 aa26.49■■□□□ 1.83
CHRNA3-207ENST00000559941 HCLS1P14317 486 aaPredicted RBP26.48■■□□□ 1.83
CHRNA3-207ENST00000559941 SCN4AP35499 1836 aa26.47■■□□□ 1.83
CHRNA3-207ENST00000559941 NCBP3Q53F19 620 aaKnown RBP26.47■■□□□ 1.83
CHRNA3-207ENST00000559941 CHMP4AQ9BY43 222 aa26.47■■□□□ 1.83
CHRNA3-207ENST00000559941 DDX60Q8IY21 1712 aaKnown RBP26.47■■□□□ 1.83
CHRNA3-207ENST00000559941 ABCC4O15439 1325 aa26.46■■□□□ 1.83
CHRNA3-207ENST00000559941 WWC1Q8IX03 1113 aa26.46■■□□□ 1.83
CHRNA3-207ENST00000559941 PHAXQ9H814 394 aaKnown RBP26.46■■□□□ 1.83
CHRNA3-207ENST00000559941 TCERG1O14776 1098 aaKnown RBP26.45■■□□□ 1.82
CHRNA3-207ENST00000559941 TRIM28Q13263 835 aaKnown RBP26.45■■□□□ 1.82
CHRNA3-207ENST00000559941 L3MBTL3Q96JM7 780 aaPredicted RBP26.45■■□□□ 1.82
CHRNA3-207ENST00000559941 ATP5J2-PTCD1G3V325 749 aa26.44■■□□□ 1.82
CHRNA3-207ENST00000559941 FZD9O00144 591 aa26.44■■□□□ 1.82
CHRNA3-207ENST00000559941 ATP6V0A2Q9Y487 856 aa26.44■■□□□ 1.82
CHRNA3-207ENST00000559941 TAF1P21675 1872 aa26.44■■□□□ 1.82
CHRNA3-207ENST00000559941 ZNF541Q9H0D2 1346 aa26.43■■□□□ 1.82
CHRNA3-207ENST00000559941 BBOX1O75936 387 aa26.43■■□□□ 1.82
CHRNA3-207ENST00000559941 GOLGA2Q08379 1002 aa26.43■■□□□ 1.82
CHRNA3-207ENST00000559941 CCDC30Q5VVM6 783 aa26.43■■□□□ 1.82
CHRNA3-207ENST00000559941 RIC3Q7Z5B4 369 aa26.43■■□□□ 1.82
CHRNA3-207ENST00000559941 SLC51AQ86UW1 340 aa26.43■■□□□ 1.82
CHRNA3-207ENST00000559941 DDX46Q7L014 1031 aaKnown RBP26.42■■□□□ 1.82
CHRNA3-207ENST00000559941 DNAJC5GQ8N7S2 189 aa26.42■■□□□ 1.82
CHRNA3-207ENST00000559941 TSPYL6Q8N831 410 aa26.42■■□□□ 1.82
CHRNA3-207ENST00000559941 JDP2Q8WYK2 163 aa26.42■■□□□ 1.82
CHRNA3-207ENST00000559941 TSR2Q969E8 191 aaKnown RBP26.42■■□□□ 1.82
CHRNA3-207ENST00000559941 ZNF428Q96B54 188 aa26.42■■□□□ 1.82
CHRNA3-207ENST00000559941 FAM89AQ96GI7 184 aa26.42■■□□□ 1.82
CHRNA3-207ENST00000559941 TMX4Q9H1E5 349 aaPredicted RBP26.42■■□□□ 1.82
CHRNA3-207ENST00000559941 IL16Q14005 1332 aa26.41■■□□□ 1.82
CHRNA3-207ENST00000559941 IQCA1LA6NCM1 817 aa26.41■■□□□ 1.82
CHRNA3-207ENST00000559941 GRAPQ13588 217 aa26.4■■□□□ 1.82
CHRNA3-207ENST00000559941 SP8Q8IXZ3 490 aa26.4■■□□□ 1.82
CHRNA3-207ENST00000559941 GRAPLQ8TC17 118 aaPredicted RBP26.4■■□□□ 1.82
CHRNA3-207ENST00000559941 COL4A5P29400 1685 aa26.4■■□□□ 1.82
CHRNA3-207ENST00000559941 HTRA3P83110 453 aa26.38■■□□□ 1.81
CHRNA3-207ENST00000559941 SF3B3Q15393 1217 aaKnown RBP26.38■■□□□ 1.81
CHRNA3-207ENST00000559941 LARGE2Q8N3Y3 721 aa26.38■■□□□ 1.81
CHRNA3-207ENST00000559941 GPC2Q8N158 579 aa26.37■■□□□ 1.81
CHRNA3-207ENST00000559941 MYD88Q99836 296 aa26.37■■□□□ 1.81
CHRNA3-207ENST00000559941 RTFDC1Q9BY42 306 aaPredicted RBP26.37■■□□□ 1.81
CHRNA3-207ENST00000559941 VPS33BQ9H267 617 aa26.37■■□□□ 1.81
CHRNA3-207ENST00000559941 TAF1DQ9H5J8 278 aaPredicted RBP26.37■■□□□ 1.81
CHRNA3-207ENST00000559941 DDX58O95786 925 aaKnown RBP26.36■■□□□ 1.81
CHRNA3-207ENST00000559941 POTEIP0CG38 1075 aa26.36■■□□□ 1.81
CHRNA3-207ENST00000559941 POTEJP0CG39 1038 aa26.36■■□□□ 1.81
CHRNA3-207ENST00000559941 EIF6P56537 245 aaKnown RBP26.36■■□□□ 1.81
CHRNA3-207ENST00000559941 CHADLQ6NUI6 762 aa26.36■■□□□ 1.81
CHRNA3-207ENST00000559941 IRS4O14654 1257 aaPredicted RBP26.35■■□□□ 1.81
CHRNA3-207ENST00000559941 TWISTNBQ3B726 338 aaPredicted RBP26.35■■□□□ 1.81
CHRNA3-207ENST00000559941 RTL5Q5HYW3 569 aaPredicted RBP26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms